RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ELP3Q9H9T3 547 aa24.49■■□□□ 1.51
MSH5-215ENST00000482280 USP40Q9NVE5 1235 aa24.49■■□□□ 1.51
MSH5-215ENST00000482280 UQCRFS1P1P0C7P4 283 aa24.48■■□□□ 1.51
MSH5-215ENST00000482280 MAP3K9P80192 1104 aa24.48■■□□□ 1.51
MSH5-215ENST00000482280 POLA2Q14181 598 aa24.48■■□□□ 1.51
MSH5-215ENST00000482280 CCDC158Q5M9N0 1113 aa24.48■■□□□ 1.51
MSH5-215ENST00000482280 ERICH6Q7L0X2 663 aa24.48■■□□□ 1.51
MSH5-215ENST00000482280 TBC1D8O95759 1140 aa24.47■■□□□ 1.51
MSH5-215ENST00000482280 CDC42EP5Q6NZY7 148 aa24.47■■□□□ 1.51
MSH5-215ENST00000482280 SPATA5Q8NB90 893 aa24.47■■□□□ 1.51
MSH5-215ENST00000482280 PANK1Q8TE04 598 aa24.47■■□□□ 1.51
MSH5-215ENST00000482280 MCOLN1Q9GZU1 580 aa24.47■■□□□ 1.51
MSH5-215ENST00000482280 CHMP4BQ9H444 224 aaKnown RBP24.47■■□□□ 1.51
MSH5-215ENST00000482280 GSTO1P78417 241 aa24.46■■□□□ 1.51
MSH5-215ENST00000482280 TCP10Q12799 353 aa24.46■■□□□ 1.51
MSH5-215ENST00000482280 TTC39AQ5SRH9 613 aa24.46■■□□□ 1.51
MSH5-215ENST00000482280 CDAN1Q8IWY9 1227 aa24.46■■□□□ 1.51
MSH5-215ENST00000482280 FAM151AQ8WW52 585 aa24.46■■□□□ 1.51
MSH5-215ENST00000482280 OPTNQ96CV9 577 aa24.46■■□□□ 1.51
MSH5-215ENST00000482280 RPAP1Q9BWH6 1393 aaPredicted RBP24.45■■□□□ 1.5
MSH5-215ENST00000482280 CCDC85CA6NKD9 419 aa24.45■■□□□ 1.5
MSH5-215ENST00000482280 WRNIP1Q96S55 665 aa24.45■■□□□ 1.5
MSH5-215ENST00000482280 GPR108Q9NPR9 543 aa24.45■■□□□ 1.5
MSH5-215ENST00000482280 RCAN3Q9UKA8 241 aa24.45■■□□□ 1.5
MSH5-215ENST00000482280 LDHCP07864 332 aa24.44■■□□□ 1.5
MSH5-215ENST00000482280 VGLL4Q14135 290 aa24.44■■□□□ 1.5
MSH5-215ENST00000482280 TNNI3KQ59H18 835 aa24.44■■□□□ 1.5
MSH5-215ENST00000482280 IFNL1Q8IU54 200 aa24.44■■□□□ 1.5
MSH5-215ENST00000482280 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.44■■□□□ 1.5
MSH5-215ENST00000482280 ZNF341Q9BYN7 854 aa24.44■■□□□ 1.5
MSH5-215ENST00000482280 RAI14Q9P0K7 980 aa24.44■■□□□ 1.5
MSH5-215ENST00000482280 HMG20BQ9P0W2 317 aa24.44■■□□□ 1.5
MSH5-215ENST00000482280 FPGT-TNNI3KV9GXZ4 949 aa24.44■■□□□ 1.5
MSH5-215ENST00000482280 ARID4AP29374 1257 aaPredicted RBP24.43■■□□□ 1.5
MSH5-215ENST00000482280 ERC1Q8IUD2 1116 aa24.43■■□□□ 1.5
MSH5-215ENST00000482280 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.43■■□□□ 1.5
MSH5-215ENST00000482280 NOL10Q9BSC4 688 aaKnown RBP24.43■■□□□ 1.5
MSH5-215ENST00000482280 LRP2BPQ9P2M1 347 aa24.43■■□□□ 1.5
MSH5-215ENST00000482280 DDX19BQ9UMR2 479 aa24.43■■□□□ 1.5
MSH5-215ENST00000482280 WDHD1O75717 1129 aaPredicted RBP24.42■■□□□ 1.5
MSH5-215ENST00000482280 HSP90AB4PQ58FF6 505 aa24.42■■□□□ 1.5
MSH5-215ENST00000482280 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.42■■□□□ 1.5
MSH5-215ENST00000482280 CTU1Q7Z7A3 348 aaKnown RBP24.42■■□□□ 1.5
MSH5-215ENST00000482280 ZSCAN29Q8IWY8 852 aaPredicted RBP24.42■■□□□ 1.5
MSH5-215ENST00000482280 OTUD5Q96G74 571 aa24.42■■□□□ 1.5
MSH5-215ENST00000482280 CASP8AP2Q9UKL3 1982 aa24.42■■□□□ 1.5
MSH5-215ENST00000482280 GPR25O00155 361 aa24.41■■□□□ 1.5
MSH5-215ENST00000482280 GTF2A2P52657 109 aa24.41■■□□□ 1.5
MSH5-215ENST00000482280 MECOMQ03112 1051 aa24.41■■□□□ 1.5
MSH5-215ENST00000482280 CEP85Q6P2H3 762 aa24.41■■□□□ 1.5
MSH5-215ENST00000482280 MIGA2Q7L4E1 593 aa24.41■■□□□ 1.5
MSH5-215ENST00000482280 NOP58Q9Y2X3 529 aaKnown RBP24.41■■□□□ 1.5
MSH5-215ENST00000482280 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.41■■□□□ 1.5
MSH5-215ENST00000482280 MROH7-TTC4A0A0A0MT08 1334 aa24.4■■□□□ 1.5
MSH5-215ENST00000482280 GAKO14976 1311 aa24.4■■□□□ 1.5
MSH5-215ENST00000482280 HMMRO75330 724 aa24.4■■□□□ 1.5
MSH5-215ENST00000482280 BTDP43251 543 aa24.4■■□□□ 1.5
MSH5-215ENST00000482280 NOM1Q5C9Z4 860 aaKnown RBP24.4■■□□□ 1.5
MSH5-215ENST00000482280 ZNF296Q8WUU4 475 aaPredicted RBP24.4■■□□□ 1.5
MSH5-215ENST00000482280 FAM163AQ96GL9 167 aaPredicted RBP24.4■■□□□ 1.5
MSH5-215ENST00000482280 FKTNO75072 461 aa24.39■■□□□ 1.49
MSH5-215ENST00000482280 ENTPD3O75355 529 aa24.39■■□□□ 1.49
MSH5-215ENST00000482280 NFIAQ12857 509 aa24.39■■□□□ 1.49
MSH5-215ENST00000482280 ERO1BQ86YB8 467 aa24.39■■□□□ 1.49
MSH5-215ENST00000482280 CFHR5Q9BXR6 569 aa24.39■■□□□ 1.49
MSH5-215ENST00000482280 MCAMP43121 646 aa24.38■■□□□ 1.49
MSH5-215ENST00000482280 RGS3P49796 1198 aa24.38■■□□□ 1.49
MSH5-215ENST00000482280 PKN2Q16513 984 aaKnown RBP24.38■■□□□ 1.49
MSH5-215ENST00000482280 PI16Q6UXB8 463 aa24.38■■□□□ 1.49
MSH5-215ENST00000482280 TBC1D9Q6ZT07 1266 aa24.38■■□□□ 1.49
MSH5-215ENST00000482280 ZKSCAN4Q969J2 545 aaPredicted RBP24.38■■□□□ 1.49
MSH5-215ENST00000482280 DBNDD2Q9BQY9 259 aa24.38■■□□□ 1.49
MSH5-215ENST00000482280 IDI2Q9BXS1 227 aa24.38■■□□□ 1.49
MSH5-215ENST00000482280 COG6Q9Y2V7 657 aa24.38■■□□□ 1.49
MSH5-215ENST00000482280 CCL15-CCL14A0A0B4J2E2 113 aa24.37■■□□□ 1.49
MSH5-215ENST00000482280 SPDYE5A6NIY4 337 aa24.37■■□□□ 1.49
MSH5-215ENST00000482280 GJA5P36382 358 aa24.37■■□□□ 1.49
MSH5-215ENST00000482280 PICALMQ13492 652 aa24.37■■□□□ 1.49
MSH5-215ENST00000482280 CCL15Q16663 113 aa24.37■■□□□ 1.49
MSH5-215ENST00000482280 FAM198AQ9UFP1 575 aa24.37■■□□□ 1.49
MSH5-215ENST00000482280 IGF2BP3O00425 579 aaKnown RBP eCLIP24.36■■□□□ 1.49
MSH5-215ENST00000482280 MAP4K4O95819 1239 aaPredicted RBP24.36■■□□□ 1.49
MSH5-215ENST00000482280 RPAP2Q8IXW5 612 aaPredicted RBP24.36■■□□□ 1.49
MSH5-215ENST00000482280 SNRKQ9NRH2 765 aa24.36■■□□□ 1.49
MSH5-215ENST00000482280 EXOC6BQ9Y2D4 811 aa24.36■■□□□ 1.49
MSH5-215ENST00000482280 GPR75-ASB3A0A0A6YYF3 556 aa24.35■■□□□ 1.49
MSH5-215ENST00000482280 CETPP11597 493 aa24.35■■□□□ 1.49
MSH5-215ENST00000482280 SNAPC2Q13487 334 aa24.35■■□□□ 1.49
MSH5-215ENST00000482280 CNKSR2Q8WXI2 1034 aa24.35■■□□□ 1.49
MSH5-215ENST00000482280 NSUN4Q96CB9 384 aaKnown RBP24.35■■□□□ 1.49
MSH5-215ENST00000482280 SNCAIPQ9Y6H5 919 aa24.35■■□□□ 1.49
MSH5-215ENST00000482280 TESPA1A2RU30 521 aaPredicted RBP24.34■■□□□ 1.49
MSH5-215ENST00000482280 BAG3O95817 575 aa24.34■■□□□ 1.49
MSH5-215ENST00000482280 NAA16Q6N069 864 aaPredicted RBP24.34■■□□□ 1.49
MSH5-215ENST00000482280 CCDC8Q9H0W5 538 aaPredicted RBP24.34■■□□□ 1.49
MSH5-215ENST00000482280 OTOFQ9HC10 1997 aa24.33■■□□□ 1.49
MSH5-215ENST00000482280 PPATQ06203 517 aa24.33■■□□□ 1.49
MSH5-215ENST00000482280 PPIL2Q13356 520 aa24.33■■□□□ 1.49
MSH5-215ENST00000482280 AACSQ86V21 672 aa24.33■■□□□ 1.49
MSH5-215ENST00000482280 MS4A4AQ96JQ5 239 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms