RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 GORABQ5T7V8 394 aa12.94□□□□□ -0.34
CPSF4-212ENST00000482251 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.94□□□□□ -0.34
CPSF4-212ENST00000482251 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.94□□□□□ -0.34
CPSF4-212ENST00000482251 PANK1Q8TE04 598 aa12.94□□□□□ -0.34
CPSF4-212ENST00000482251 WRNIP1Q96S55 665 aa12.94□□□□□ -0.34
CPSF4-212ENST00000482251 RPAP1Q9BWH6 1393 aaPredicted RBP12.94□□□□□ -0.34
CPSF4-212ENST00000482251 MIGA2Q7L4E1 593 aa12.93□□□□□ -0.34
CPSF4-212ENST00000482251 FAM83AQ86UY5 434 aa12.93□□□□□ -0.34
CPSF4-212ENST00000482251 IFNL1Q8IU54 200 aa12.93□□□□□ -0.34
CPSF4-212ENST00000482251 OTUD5Q96G74 571 aa12.93□□□□□ -0.34
CPSF4-212ENST00000482251 USP40Q9NVE5 1235 aa12.93□□□□□ -0.34
CPSF4-212ENST00000482251 CSADQ9Y600 493 aa12.93□□□□□ -0.34
CPSF4-212ENST00000482251 AK9Q5TCS8 1911 aa12.93□□□□□ -0.34
CPSF4-212ENST00000482251 DOCK2Q92608 1830 aa12.92□□□□□ -0.34
CPSF4-212ENST00000482251 GPR25O00155 361 aa12.92□□□□□ -0.34
CPSF4-212ENST00000482251 MAP3K9P80192 1104 aa12.92□□□□□ -0.34
CPSF4-212ENST00000482251 POLA2Q14181 598 aa12.92□□□□□ -0.34
CPSF4-212ENST00000482251 CTU1Q7Z7A3 348 aaKnown RBP12.92□□□□□ -0.34
CPSF4-212ENST00000482251 ZGPATQ8N5A5 531 aaKnown RBP12.92□□□□□ -0.34
CPSF4-212ENST00000482251 ZKSCAN4Q969J2 545 aaPredicted RBP12.92□□□□□ -0.34
CPSF4-212ENST00000482251 MRIQ9BWK5 157 aa12.92□□□□□ -0.34
CPSF4-212ENST00000482251 HMG20BQ9P0W2 317 aa12.92□□□□□ -0.34
CPSF4-212ENST00000482251 SNCAIPQ9Y6H5 919 aa12.92□□□□□ -0.34
CPSF4-212ENST00000482251 SURF6O75683 361 aaKnown RBP12.91□□□□□ -0.34
CPSF4-212ENST00000482251 MCAMP43121 646 aa12.91□□□□□ -0.34
CPSF4-212ENST00000482251 ATP8B2P98198 1209 aa12.91□□□□□ -0.34
CPSF4-212ENST00000482251 FKBP1CQ5VVH2 108 aa12.91□□□□□ -0.34
CPSF4-212ENST00000482251 TBC1D9Q6ZT07 1266 aa12.91□□□□□ -0.34
CPSF4-212ENST00000482251 ZFPM1Q8IX07 1006 aa12.91□□□□□ -0.34
CPSF4-212ENST00000482251 SSH3Q8TE77 659 aa12.91□□□□□ -0.34
CPSF4-212ENST00000482251 FAM198AQ9UFP1 575 aa12.91□□□□□ -0.34
CPSF4-212ENST00000482251 MAST2Q6P0Q8 1798 aa12.91□□□□□ -0.34
CPSF4-212ENST00000482251 GAKO14976 1311 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 PDS5AQ29RF7 1337 aaKnown RBP12.9□□□□□ -0.34
CPSF4-212ENST00000482251 CCL15-CCL14A0A0B4J2E2 113 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 UNCXA6NJT0 531 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 ZBTB7BO15156 539 aaPredicted RBP12.9□□□□□ -0.34
CPSF4-212ENST00000482251 ARID4AP29374 1257 aaPredicted RBP12.9□□□□□ -0.34
CPSF4-212ENST00000482251 INPP5BP32019 993 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 BTDP43251 543 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 RGS3P49796 1198 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 MECOMQ03112 1051 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 CRHR2Q13324 411 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 PICALMQ13492 652 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 CCL15Q16663 113 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 TNNI3KQ59H18 835 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 DCAF15Q66K64 600 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 ERICH6Q7L0X2 663 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 SPATA5Q8NB90 893 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 FAM151AQ8WW52 585 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 PTPN18Q99952 460 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 DBNDD2Q9BQY9 259 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 SNRKQ9NRH2 765 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 TLR7Q9NYK1 1049 aaKnown RBP12.9□□□□□ -0.34
CPSF4-212ENST00000482251 FPGT-TNNI3KV9GXZ4 949 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 RFX7Q2KHR2 1363 aa12.9□□□□□ -0.34
CPSF4-212ENST00000482251 MROH7-TTC4A0A0A0MT08 1334 aa12.89□□□□□ -0.35
CPSF4-212ENST00000482251 FKTNO75072 461 aa12.89□□□□□ -0.35
CPSF4-212ENST00000482251 ALDH1A1P00352 501 aa12.89□□□□□ -0.35
CPSF4-212ENST00000482251 SLURP2P0DP57 97 aa12.89□□□□□ -0.35
CPSF4-212ENST00000482251 SOX10P56693 466 aa12.89□□□□□ -0.35
CPSF4-212ENST00000482251 TTC39AQ5SRH9 613 aa12.89□□□□□ -0.35
CPSF4-212ENST00000482251 SPTY2D1Q68D10 685 aaPredicted RBP12.89□□□□□ -0.35
CPSF4-212ENST00000482251 CEP85Q6P2H3 762 aa12.89□□□□□ -0.35
CPSF4-212ENST00000482251 ZNF384Q8TF68 577 aa12.89□□□□□ -0.35
CPSF4-212ENST00000482251 BRI3BPQ8WY22 251 aa12.89□□□□□ -0.35
CPSF4-212ENST00000482251 HOOK2Q96ED9 719 aa12.89□□□□□ -0.35
CPSF4-212ENST00000482251 MS4A4AQ96JQ5 239 aa12.89□□□□□ -0.35
CPSF4-212ENST00000482251 ZNF341Q9BYN7 854 aa12.89□□□□□ -0.35
CPSF4-212ENST00000482251 RAI14Q9P0K7 980 aa12.89□□□□□ -0.35
CPSF4-212ENST00000482251 SPDYE5A6NIY4 337 aa12.88□□□□□ -0.35
CPSF4-212ENST00000482251 INHBEP58166 350 aa12.88□□□□□ -0.35
CPSF4-212ENST00000482251 ZSCAN29Q8IWY8 852 aaPredicted RBP12.88□□□□□ -0.35
CPSF4-212ENST00000482251 CFHR5Q9BXR6 569 aa12.88□□□□□ -0.35
CPSF4-212ENST00000482251 BCL11AQ9H165 835 aa12.88□□□□□ -0.35
CPSF4-212ENST00000482251 DDX4Q9NQI0 724 aaKnown RBP12.88□□□□□ -0.35
CPSF4-212ENST00000482251 EXOC6BQ9Y2D4 811 aa12.88□□□□□ -0.35
CPSF4-212ENST00000482251 IRF6O14896 467 aa12.87□□□□□ -0.35
CPSF4-212ENST00000482251 WDHD1O75717 1129 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-212ENST00000482251 GTF2A2P52657 109 aa12.87□□□□□ -0.35
CPSF4-212ENST00000482251 OTUD7BQ6GQQ9 843 aa12.87□□□□□ -0.35
CPSF4-212ENST00000482251 ERO1BQ86YB8 467 aa12.87□□□□□ -0.35
CPSF4-212ENST00000482251 SLF2Q8IX21 1173 aa12.87□□□□□ -0.35
CPSF4-212ENST00000482251 FAM43AQ8N2R8 423 aa12.87□□□□□ -0.35
CPSF4-212ENST00000482251 NSUN4Q96CB9 384 aaKnown RBP12.87□□□□□ -0.35
CPSF4-212ENST00000482251 CCDC8Q9H0W5 538 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-212ENST00000482251 LRP2BPQ9P2M1 347 aa12.87□□□□□ -0.35
CPSF4-212ENST00000482251 DBNLQ9UJU6 430 aaKnown RBP12.87□□□□□ -0.35
CPSF4-212ENST00000482251 HPS5Q9UPZ3 1129 aa12.87□□□□□ -0.35
CPSF4-212ENST00000482251 COG6Q9Y2V7 657 aa12.87□□□□□ -0.35
CPSF4-212ENST00000482251 MYO5AQ9Y4I1 1855 aaKnown RBP12.87□□□□□ -0.35
CPSF4-212ENST00000482251 ZSWIM8A7E2V4 1837 aa12.86□□□□□ -0.35
CPSF4-212ENST00000482251 ATRNL1Q5VV63 1379 aa12.86□□□□□ -0.35
CPSF4-212ENST00000482251 TESPA1A2RU30 521 aaPredicted RBP12.86□□□□□ -0.35
CPSF4-212ENST00000482251 DDTLA6NHG4 134 aaPredicted RBP12.86□□□□□ -0.35
CPSF4-212ENST00000482251 APBB1O00213 710 aa12.86□□□□□ -0.35
CPSF4-212ENST00000482251 ZBTB22O15209 634 aa12.86□□□□□ -0.35
CPSF4-212ENST00000482251 UQCRFS1P1P0C7P4 283 aa12.86□□□□□ -0.35
CPSF4-212ENST00000482251 TAF1CQ15572 869 aaPredicted RBP12.86□□□□□ -0.35
CPSF4-212ENST00000482251 CCDC158Q5M9N0 1113 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms