RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 HMG20BQ9P0W2 317 aa20.93■□□□□ 0.94
HSPG2-209ENST00000480900 ABCF2Q9UG63 623 aa20.93■□□□□ 0.94
HSPG2-209ENST00000480900 PDE3AQ14432 1141 aa20.92■□□□□ 0.94
HSPG2-209ENST00000480900 SPRYD7Q5W111 196 aa20.92■□□□□ 0.94
HSPG2-209ENST00000480900 CDC42EP5Q6NZY7 148 aa20.92■□□□□ 0.94
HSPG2-209ENST00000480900 SLF2Q8IX21 1173 aa20.92■□□□□ 0.94
HSPG2-209ENST00000480900 ANKRD13AQ8IZ07 590 aa20.92■□□□□ 0.94
HSPG2-209ENST00000480900 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.92■□□□□ 0.94
HSPG2-209ENST00000480900 CLMNQ96JQ2 1002 aa20.92■□□□□ 0.94
HSPG2-209ENST00000480900 ZBTB40Q9NUA8 1239 aa20.92■□□□□ 0.94
HSPG2-209ENST00000480900 RNF186Q9NXI6 227 aa20.92■□□□□ 0.94
HSPG2-209ENST00000480900 GAKO14976 1311 aa20.92■□□□□ 0.94
HSPG2-209ENST00000480900 MAST2Q6P0Q8 1798 aa20.92■□□□□ 0.94
HSPG2-209ENST00000480900 ERICH6Q7L0X2 663 aa20.91■□□□□ 0.94
HSPG2-209ENST00000480900 ERC1Q8IUD2 1116 aa20.91■□□□□ 0.94
HSPG2-209ENST00000480900 HOOK2Q96ED9 719 aa20.91■□□□□ 0.94
HSPG2-209ENST00000480900 DOCK2Q92608 1830 aa20.9■□□□□ 0.94
HSPG2-209ENST00000480900 TRPA1O75762 1119 aa20.9■□□□□ 0.94
HSPG2-209ENST00000480900 ZBTB48P10074 688 aaPredicted RBP20.9■□□□□ 0.94
HSPG2-209ENST00000480900 MCAMP43121 646 aa20.9■□□□□ 0.94
HSPG2-209ENST00000480900 TM4SF4P48230 202 aa20.9■□□□□ 0.94
HSPG2-209ENST00000480900 SREBF2Q12772 1141 aa20.9■□□□□ 0.94
HSPG2-209ENST00000480900 PI16Q6UXB8 463 aa20.9■□□□□ 0.94
HSPG2-209ENST00000480900 RPAP2Q8IXW5 612 aaPredicted RBP20.9■□□□□ 0.94
HSPG2-209ENST00000480900 FAM163AQ96GL9 167 aaPredicted RBP20.9■□□□□ 0.94
HSPG2-209ENST00000480900 DBNDD2Q9BQY9 259 aa20.9■□□□□ 0.94
HSPG2-209ENST00000480900 MKRN3Q13064 507 aaKnown RBP20.89■□□□□ 0.93
HSPG2-209ENST00000480900 HSP90AB4PQ58FF6 505 aa20.89■□□□□ 0.93
HSPG2-209ENST00000480900 CCDC158Q5M9N0 1113 aa20.89■□□□□ 0.93
HSPG2-209ENST00000480900 TTC39AQ5SRH9 613 aa20.89■□□□□ 0.93
HSPG2-209ENST00000480900 FAM151AQ8WW52 585 aa20.89■□□□□ 0.93
HSPG2-209ENST00000480900 WNK4Q96J92 1243 aa20.89■□□□□ 0.93
HSPG2-209ENST00000480900 USP40Q9NVE5 1235 aa20.89■□□□□ 0.93
HSPG2-209ENST00000480900 EXOC6BQ9Y2D4 811 aa20.89■□□□□ 0.93
HSPG2-209ENST00000480900 HMMRO75330 724 aa20.88■□□□□ 0.93
HSPG2-209ENST00000480900 MECOMQ03112 1051 aa20.88■□□□□ 0.93
HSPG2-209ENST00000480900 ZNF512BQ96KM6 892 aaPredicted RBP20.88■□□□□ 0.93
HSPG2-209ENST00000480900 MROH7-TTC4A0A0A0MT08 1334 aa20.87■□□□□ 0.93
HSPG2-209ENST00000480900 NFIAQ12857 509 aa20.87■□□□□ 0.93
HSPG2-209ENST00000480900 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.87■□□□□ 0.93
HSPG2-209ENST00000480900 EAF2Q96CJ1 260 aaPredicted RBP20.87■□□□□ 0.93
HSPG2-209ENST00000480900 DBNLQ9UJU6 430 aaKnown RBP20.87■□□□□ 0.93
HSPG2-209ENST00000480900 RFX7Q2KHR2 1363 aa20.86■□□□□ 0.93
HSPG2-209ENST00000480900 MANSC4A6NHS7 340 aaPredicted RBP20.86■□□□□ 0.93
HSPG2-209ENST00000480900 GSTO1P78417 241 aa20.86■□□□□ 0.93
HSPG2-209ENST00000480900 MAP3K9P80192 1104 aa20.86■□□□□ 0.93
HSPG2-209ENST00000480900 C20orf194Q5TEA3 1177 aa20.86■□□□□ 0.93
HSPG2-209ENST00000480900 DCAF15Q66K64 600 aa20.86■□□□□ 0.93
HSPG2-209ENST00000480900 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.86■□□□□ 0.93
HSPG2-209ENST00000480900 TBC1D9Q6ZT07 1266 aa20.86■□□□□ 0.93
HSPG2-209ENST00000480900 IDI2Q9BXS1 227 aa20.86■□□□□ 0.93
HSPG2-209ENST00000480900 FAM198AQ9UFP1 575 aa20.86■□□□□ 0.93
HSPG2-209ENST00000480900 GPR75-ASB3A0A0A6YYF3 556 aa20.85■□□□□ 0.93
HSPG2-209ENST00000480900 LDHCP07864 332 aa20.85■□□□□ 0.93
HSPG2-209ENST00000480900 BTDP43251 543 aa20.85■□□□□ 0.93
HSPG2-209ENST00000480900 INHBEP58166 350 aa20.85■□□□□ 0.93
HSPG2-209ENST00000480900 VGLL4Q14135 290 aa20.85■□□□□ 0.93
HSPG2-209ENST00000480900 SIRT2Q8IXJ6 389 aa20.85■□□□□ 0.93
HSPG2-209ENST00000480900 ZNF384Q8TF68 577 aa20.85■□□□□ 0.93
HSPG2-209ENST00000480900 NSUN4Q96CB9 384 aaKnown RBP20.85■□□□□ 0.93
HSPG2-209ENST00000480900 ELP3Q9H9T3 547 aa20.85■□□□□ 0.93
HSPG2-209ENST00000480900 TLR7Q9NYK1 1049 aaKnown RBP20.85■□□□□ 0.93
HSPG2-209ENST00000480900 RAI14Q9P0K7 980 aa20.85■□□□□ 0.93
HSPG2-209ENST00000480900 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.85■□□□□ 0.93
HSPG2-209ENST00000480900 CSADQ9Y600 493 aa20.85■□□□□ 0.93
HSPG2-209ENST00000480900 CDK5RAP2Q96SN8 1893 aa20.85■□□□□ 0.93
HSPG2-209ENST00000480900 ENTPD3O75355 529 aa20.84■□□□□ 0.93
HSPG2-209ENST00000480900 GJA5P36382 358 aa20.84■□□□□ 0.93
HSPG2-209ENST00000480900 TCP10Q12799 353 aa20.84■□□□□ 0.93
HSPG2-209ENST00000480900 CCDC8Q9H0W5 538 aaPredicted RBP20.84■□□□□ 0.93
HSPG2-209ENST00000480900 SNRKQ9NRH2 765 aa20.84■□□□□ 0.93
HSPG2-209ENST00000480900 LRP2BPQ9P2M1 347 aa20.84■□□□□ 0.93
HSPG2-209ENST00000480900 FOCADQ5VW36 1801 aa20.83■□□□□ 0.93
HSPG2-209ENST00000480900 IGSF3O75054 1194 aa20.83■□□□□ 0.93
HSPG2-209ENST00000480900 MAP4K4O95819 1239 aaPredicted RBP20.83■□□□□ 0.93
HSPG2-209ENST00000480900 RGS3P49796 1198 aa20.83■□□□□ 0.93
HSPG2-209ENST00000480900 RHPN1Q8TCX5 695 aa20.83■□□□□ 0.93
HSPG2-209ENST00000480900 WRNIP1Q96S55 665 aa20.83■□□□□ 0.93
HSPG2-209ENST00000480900 ZNF341Q9BYN7 854 aa20.83■□□□□ 0.93
HSPG2-209ENST00000480900 WDHD1O75717 1129 aaPredicted RBP20.82■□□□□ 0.92
HSPG2-209ENST00000480900 ALDH1A1P00352 501 aa20.82■□□□□ 0.92
HSPG2-209ENST00000480900 AACSQ86V21 672 aa20.82■□□□□ 0.92
HSPG2-209ENST00000480900 OPTNQ96CV9 577 aa20.82■□□□□ 0.92
HSPG2-209ENST00000480900 KIF1BPQ96EK5 621 aa20.82■□□□□ 0.92
HSPG2-209ENST00000480900 CFHR5Q9BXR6 569 aa20.82■□□□□ 0.92
HSPG2-209ENST00000480900 CYP2E1P05181 493 aaPredicted RBP20.81■□□□□ 0.92
HSPG2-209ENST00000480900 RHBDL3P58872 404 aa20.81■□□□□ 0.92
HSPG2-209ENST00000480900 MIGA2Q7L4E1 593 aa20.81■□□□□ 0.92
HSPG2-209ENST00000480900 IFNL1Q8IU54 200 aa20.81■□□□□ 0.92
HSPG2-209ENST00000480900 SNCAIPQ9Y6H5 919 aa20.81■□□□□ 0.92
HSPG2-209ENST00000480900 SPDYE5A6NIY4 337 aa20.8■□□□□ 0.92
HSPG2-209ENST00000480900 RAB11FIP3O75154 756 aa20.8■□□□□ 0.92
HSPG2-209ENST00000480900 NPM3O75607 178 aaKnown RBP20.8■□□□□ 0.92
HSPG2-209ENST00000480900 ZAP70P43403 619 aa20.8■□□□□ 0.92
HSPG2-209ENST00000480900 NOM1Q5C9Z4 860 aaKnown RBP20.8■□□□□ 0.92
HSPG2-209ENST00000480900 ZFPM1Q8IX07 1006 aa20.8■□□□□ 0.92
HSPG2-209ENST00000480900 CLASRPQ8N2M8 674 aaKnown RBP20.8■□□□□ 0.92
HSPG2-209ENST00000480900 IL1RAPL2Q9NP60 686 aa20.8■□□□□ 0.92
HSPG2-209ENST00000480900 TESPA1A2RU30 521 aaPredicted RBP20.79■□□□□ 0.92
HSPG2-209ENST00000480900 TBC1D8O95759 1140 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms