RNA–Protein interactions for RNA: ENST00000480828.5

UBE2F-221, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 802 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-221ENST00000480828 MUC3BQ9H195 1237 aa5.32□□□□□ -1.56
UBE2F-221ENST00000480828 RBSNQ9H1K0 784 aa5.32□□□□□ -1.56
UBE2F-221ENST00000480828 ZNF408Q9H9D4 720 aa5.32□□□□□ -1.56
UBE2F-221ENST00000480828 SH2B1Q9NRF2 756 aaPredicted RBP5.32□□□□□ -1.56
UBE2F-221ENST00000480828 KANSL3Q9P2N6 904 aa5.32□□□□□ -1.56
UBE2F-221ENST00000480828 MRVI1Q9Y6F6 885 aa5.32□□□□□ -1.56
UBE2F-221ENST00000480828 MRPL42Q9Y6G3 142 aaKnown RBP5.32□□□□□ -1.56
UBE2F-221ENST00000480828 A0A1W2PP55 124 aa5.31□□□□□ -1.56
UBE2F-221ENST00000480828 HYAL3O43820 417 aaPredicted RBP5.31□□□□□ -1.56
UBE2F-221ENST00000480828 SSBP05455 408 aaKnown RBP eCLIP5.31□□□□□ -1.56
UBE2F-221ENST00000480828 CES1P23141 567 aa5.31□□□□□ -1.56
UBE2F-221ENST00000480828 CDC27P30260 824 aa5.31□□□□□ -1.56
UBE2F-221ENST00000480828 FCGRTP55899 365 aa5.31□□□□□ -1.56
UBE2F-221ENST00000480828 CCDC85BQ15834 202 aaPredicted RBP5.31□□□□□ -1.56
UBE2F-221ENST00000480828 TTC39BQ5VTQ0 682 aaPredicted RBP5.31□□□□□ -1.56
UBE2F-221ENST00000480828 CKAP2LQ8IYA6 745 aa5.31□□□□□ -1.56
UBE2F-221ENST00000480828 ARMC10Q8N2F6 343 aa5.31□□□□□ -1.56
UBE2F-221ENST00000480828 HHIPQ96QV1 700 aa5.31□□□□□ -1.56
UBE2F-221ENST00000480828 NOC4LQ9BVI4 516 aaKnown RBP5.31□□□□□ -1.56
UBE2F-221ENST00000480828 EHD4Q9H223 541 aa5.31□□□□□ -1.56
UBE2F-221ENST00000480828 RNF112Q9ULX5 631 aa5.31□□□□□ -1.56
UBE2F-221ENST00000480828 EFR3BQ9Y2G0 817 aa5.31□□□□□ -1.56
UBE2F-221ENST00000480828 SMNDC1O75940 238 aaKnown RBP eCLIP5.3□□□□□ -1.56
UBE2F-221ENST00000480828 GBP2P32456 591 aaPredicted RBP5.3□□□□□ -1.56
UBE2F-221ENST00000480828 ETFBP38117 255 aa5.3□□□□□ -1.56
UBE2F-221ENST00000480828 FAM160A1Q05DH4 1040 aa5.3□□□□□ -1.56
UBE2F-221ENST00000480828 SERINC3Q13530 473 aa5.3□□□□□ -1.56
UBE2F-221ENST00000480828 PEAR1Q5VY43 1037 aaPredicted RBP5.3□□□□□ -1.56
UBE2F-221ENST00000480828 KIAA1211Q6ZU35 1233 aa5.3□□□□□ -1.56
UBE2F-221ENST00000480828 GPATCH3Q96I76 525 aa5.3□□□□□ -1.56
UBE2F-221ENST00000480828 EAF1Q96JC9 268 aaPredicted RBP5.3□□□□□ -1.56
UBE2F-221ENST00000480828 SPACA7Q96KW9 195 aa5.3□□□□□ -1.56
UBE2F-221ENST00000480828 RSRP1Q9BUV0 290 aa5.3□□□□□ -1.56
UBE2F-221ENST00000480828 CARD10Q9BWT7 1032 aa5.3□□□□□ -1.56
UBE2F-221ENST00000480828 GINM1Q9NU53 330 aa5.3□□□□□ -1.56
UBE2F-221ENST00000480828 DZANK1Q9NVP4 752 aa5.3□□□□□ -1.56
UBE2F-221ENST00000480828 KRTAP9-6A0A140TA67 174 aa5.29□□□□□ -1.56
UBE2F-221ENST00000480828 FSCN2O14926 492 aa5.29□□□□□ -1.56
UBE2F-221ENST00000480828 DDX3YO15523 660 aaKnown RBP5.29□□□□□ -1.56
UBE2F-221ENST00000480828 TRPA1O75762 1119 aa5.29□□□□□ -1.56
UBE2F-221ENST00000480828 FSTP19883 344 aa5.29□□□□□ -1.56
UBE2F-221ENST00000480828 CD68P34810 354 aaPredicted RBP5.29□□□□□ -1.56
UBE2F-221ENST00000480828 EIF4A3P38919 411 aaKnown RBP5.29□□□□□ -1.56
UBE2F-221ENST00000480828 KIAA0319Q5VV43 1072 aa5.29□□□□□ -1.56
UBE2F-221ENST00000480828 NCAPG2Q86XI2 1143 aa5.29□□□□□ -1.56
UBE2F-221ENST00000480828 RELL1Q8IUW5 271 aa5.29□□□□□ -1.56
UBE2F-221ENST00000480828 ZNF296Q8WUU4 475 aaPredicted RBP5.29□□□□□ -1.56
UBE2F-221ENST00000480828 KLHDC7BQ96G42 594 aa5.29□□□□□ -1.56
UBE2F-221ENST00000480828 MRFAP1L1Q96HT8 127 aa5.29□□□□□ -1.56
UBE2F-221ENST00000480828 SEC16BQ96JE7 1060 aa5.29□□□□□ -1.56
UBE2F-221ENST00000480828 TMEM74Q96NL1 305 aa5.29□□□□□ -1.56
UBE2F-221ENST00000480828 ABCB6Q9NP58 842 aa5.29□□□□□ -1.56
UBE2F-221ENST00000480828 AKAP2Q9Y2D5 859 aa5.29□□□□□ -1.56
UBE2F-221ENST00000480828 CDC25BP30305 580 aa5.28□□□□□ -1.56
UBE2F-221ENST00000480828 HGSNATQ68CP4 663 aa5.28□□□□□ -1.56
UBE2F-221ENST00000480828 TPTE2Q6XPS3 522 aa5.28□□□□□ -1.56
UBE2F-221ENST00000480828 ANKS3Q6ZW76 656 aa5.28□□□□□ -1.56
UBE2F-221ENST00000480828 UBASH3BQ8TF42 649 aa5.28□□□□□ -1.56
UBE2F-221ENST00000480828 FAM46AQ96IP4 442 aaKnown RBP5.28□□□□□ -1.56
UBE2F-221ENST00000480828 SOX13Q9UN79 622 aa5.28□□□□□ -1.56
UBE2F-221ENST00000480828 TRAK1Q9UPV9 953 aa5.28□□□□□ -1.56
UBE2F-221ENST00000480828 TLR6Q9Y2C9 796 aa5.28□□□□□ -1.56
UBE2F-221ENST00000480828 H3BRJ5 948 aa5.27□□□□□ -1.57
UBE2F-221ENST00000480828 CELA3AP09093 270 aa5.27□□□□□ -1.57
UBE2F-221ENST00000480828 EDN3P14138 238 aa5.27□□□□□ -1.57
UBE2F-221ENST00000480828 PTPRAP18433 802 aa5.27□□□□□ -1.57
UBE2F-221ENST00000480828 PWP1Q13610 501 aa5.27□□□□□ -1.57
UBE2F-221ENST00000480828 NFE2L2Q16236 605 aa5.27□□□□□ -1.57
UBE2F-221ENST00000480828 PRPF40BQ6NWY9 871 aaKnown RBP5.27□□□□□ -1.57
UBE2F-221ENST00000480828 FBXL19Q6PCT2 694 aa5.27□□□□□ -1.57
UBE2F-221ENST00000480828 ACAD11Q709F0 780 aa5.27□□□□□ -1.57
UBE2F-221ENST00000480828 KLHL23Q8NBE8 558 aa5.27□□□□□ -1.57
UBE2F-221ENST00000480828 PHC3Q8NDX5 983 aa5.27□□□□□ -1.57
UBE2F-221ENST00000480828 DCAF11Q8TEB1 546 aa5.27□□□□□ -1.57
UBE2F-221ENST00000480828 HNRNPLLQ8WVV9 542 aaKnown RBP5.27□□□□□ -1.57
UBE2F-221ENST00000480828 PMEPA1Q969W9 287 aa5.27□□□□□ -1.57
UBE2F-221ENST00000480828 ANAPC16Q96DE5 110 aa5.27□□□□□ -1.57
UBE2F-221ENST00000480828 PPP4R2Q9NY27 417 aa5.27□□□□□ -1.57
UBE2F-221ENST00000480828 UBP1Q9NZI7 540 aa5.27□□□□□ -1.57
UBE2F-221ENST00000480828 TMEM238LA0A1B0GVL6 79 aa5.26□□□□□ -1.57
UBE2F-221ENST00000480828 CCDC85CA6NKD9 419 aa5.26□□□□□ -1.57
UBE2F-221ENST00000480828 KLF4O43474 513 aa5.26□□□□□ -1.57
UBE2F-221ENST00000480828 MED26O95402 600 aa5.26□□□□□ -1.57
UBE2F-221ENST00000480828 XRCC5P13010 732 aaKnown RBP5.26□□□□□ -1.57
UBE2F-221ENST00000480828 GLB1P16278 677 aa5.26□□□□□ -1.57
UBE2F-221ENST00000480828 GARTP22102 1010 aa5.26□□□□□ -1.57
UBE2F-221ENST00000480828 CRKP46108 304 aa5.26□□□□□ -1.57
UBE2F-221ENST00000480828 SOX9P48436 509 aa5.26□□□□□ -1.57
UBE2F-221ENST00000480828 NBPF6Q5VWK0 638 aa5.26□□□□□ -1.57
UBE2F-221ENST00000480828 DTHD1Q6ZMT9 781 aa5.26□□□□□ -1.57
UBE2F-221ENST00000480828 VN1R5Q7Z5H4 357 aa5.26□□□□□ -1.57
UBE2F-221ENST00000480828 TMEM102Q8N9M5 508 aaPredicted RBP5.26□□□□□ -1.57
UBE2F-221ENST00000480828 RHOVQ96L33 236 aa5.26□□□□□ -1.57
UBE2F-221ENST00000480828 NBPF4Q96M43 638 aa5.26□□□□□ -1.57
UBE2F-221ENST00000480828 SRPK1Q96SB4 655 aaKnown RBP5.26□□□□□ -1.57
UBE2F-221ENST00000480828 TCF12Q99081 682 aa5.26□□□□□ -1.57
UBE2F-221ENST00000480828 ZKSCAN3Q9BRR0 538 aa5.26□□□□□ -1.57
UBE2F-221ENST00000480828 CHMP4AQ9BY43 222 aa5.26□□□□□ -1.57
UBE2F-221ENST00000480828 TRIM55Q9BYV6 548 aa5.26□□□□□ -1.57
UBE2F-221ENST00000480828 LIN7BQ9HAP6 207 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms