RNA–Protein interactions for RNA: ENST00000480598.1

LIMS4-202, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 679 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-202ENST00000480598 ABCF2Q9UG63 623 aa18.4■□□□□ 0.54
LIMS4-202ENST00000480598 LAMB1P07942 1786 aa18.4■□□□□ 0.54
LIMS4-202ENST00000480598 MYH2Q9UKX2 1941 aa18.39■□□□□ 0.53
LIMS4-202ENST00000480598 CCDC85CA6NKD9 419 aa18.39■□□□□ 0.53
LIMS4-202ENST00000480598 MAP3K9P80192 1104 aa18.39■□□□□ 0.53
LIMS4-202ENST00000480598 TCP10Q12799 353 aa18.39■□□□□ 0.53
LIMS4-202ENST00000480598 NFIAQ12857 509 aa18.39■□□□□ 0.53
LIMS4-202ENST00000480598 VGLL4Q14135 290 aa18.39■□□□□ 0.53
LIMS4-202ENST00000480598 PI16Q6UXB8 463 aa18.39■□□□□ 0.53
LIMS4-202ENST00000480598 IFNL1Q8IU54 200 aa18.39■□□□□ 0.53
LIMS4-202ENST00000480598 ZNF296Q8WUU4 475 aaPredicted RBP18.39■□□□□ 0.53
LIMS4-202ENST00000480598 OPTNQ96CV9 577 aa18.39■□□□□ 0.53
LIMS4-202ENST00000480598 USP40Q9NVE5 1235 aa18.39■□□□□ 0.53
LIMS4-202ENST00000480598 PDS5AQ29RF7 1337 aaKnown RBP18.39■□□□□ 0.53
LIMS4-202ENST00000480598 RPAP1Q9BWH6 1393 aaPredicted RBP18.39■□□□□ 0.53
LIMS4-202ENST00000480598 IGF2BP3O00425 579 aaKnown RBP eCLIP18.38■□□□□ 0.53
LIMS4-202ENST00000480598 OS9Q13438 667 aaPredicted RBP18.38■□□□□ 0.53
LIMS4-202ENST00000480598 GORABQ5T7V8 394 aa18.38■□□□□ 0.53
LIMS4-202ENST00000480598 DZIP1Q86YF9 867 aaKnown RBP18.38■□□□□ 0.53
LIMS4-202ENST00000480598 HMG20BQ9P0W2 317 aa18.38■□□□□ 0.53
LIMS4-202ENST00000480598 GPR25O00155 361 aa18.37■□□□□ 0.53
LIMS4-202ENST00000480598 SURF6O75683 361 aaKnown RBP18.37■□□□□ 0.53
LIMS4-202ENST00000480598 INHBEP58166 350 aa18.37■□□□□ 0.53
LIMS4-202ENST00000480598 MIGA2Q7L4E1 593 aa18.37■□□□□ 0.53
LIMS4-202ENST00000480598 FAM151AQ8WW52 585 aa18.37■□□□□ 0.53
LIMS4-202ENST00000480598 WRNIP1Q96S55 665 aa18.37■□□□□ 0.53
LIMS4-202ENST00000480598 FAM198AQ9UFP1 575 aa18.37■□□□□ 0.53
LIMS4-202ENST00000480598 CSADQ9Y600 493 aa18.37■□□□□ 0.53
LIMS4-202ENST00000480598 GAKO14976 1311 aa18.37■□□□□ 0.53
LIMS4-202ENST00000480598 ARID4AP29374 1257 aaPredicted RBP18.36■□□□□ 0.53
LIMS4-202ENST00000480598 TNNI3KQ59H18 835 aa18.36■□□□□ 0.53
LIMS4-202ENST00000480598 CTU1Q7Z7A3 348 aaKnown RBP18.36■□□□□ 0.53
LIMS4-202ENST00000480598 ZFPM1Q8IX07 1006 aa18.36■□□□□ 0.53
LIMS4-202ENST00000480598 SPATA5Q8NB90 893 aa18.36■□□□□ 0.53
LIMS4-202ENST00000480598 CFHR5Q9BXR6 569 aa18.36■□□□□ 0.53
LIMS4-202ENST00000480598 FPGT-TNNI3KV9GXZ4 949 aa18.36■□□□□ 0.53
LIMS4-202ENST00000480598 AK9Q5TCS8 1911 aa18.35■□□□□ 0.53
LIMS4-202ENST00000480598 ALDH1A1P00352 501 aa18.35■□□□□ 0.53
LIMS4-202ENST00000480598 MCAMP43121 646 aa18.35■□□□□ 0.53
LIMS4-202ENST00000480598 SPTY2D1Q68D10 685 aaPredicted RBP18.35■□□□□ 0.53
LIMS4-202ENST00000480598 CEP85Q6P2H3 762 aa18.35■□□□□ 0.53
LIMS4-202ENST00000480598 TBC1D9Q6ZT07 1266 aa18.35■□□□□ 0.53
LIMS4-202ENST00000480598 ERICH6Q7L0X2 663 aa18.35■□□□□ 0.53
LIMS4-202ENST00000480598 ZKSCAN4Q969J2 545 aaPredicted RBP18.35■□□□□ 0.53
LIMS4-202ENST00000480598 HOOK2Q96ED9 719 aa18.35■□□□□ 0.53
LIMS4-202ENST00000480598 OTUD5Q96G74 571 aa18.35■□□□□ 0.53
LIMS4-202ENST00000480598 PTPN18Q99952 460 aa18.35■□□□□ 0.53
LIMS4-202ENST00000480598 DBNDD2Q9BQY9 259 aa18.35■□□□□ 0.53
LIMS4-202ENST00000480598 SNCAIPQ9Y6H5 919 aa18.35■□□□□ 0.53
LIMS4-202ENST00000480598 TESPA1A2RU30 521 aaPredicted RBP18.34■□□□□ 0.53
LIMS4-202ENST00000480598 MECOMQ03112 1051 aa18.34■□□□□ 0.53
LIMS4-202ENST00000480598 NOM1Q5C9Z4 860 aaKnown RBP18.34■□□□□ 0.53
LIMS4-202ENST00000480598 DCAF15Q66K64 600 aa18.34■□□□□ 0.53
LIMS4-202ENST00000480598 ZNF384Q8TF68 577 aa18.34■□□□□ 0.53
LIMS4-202ENST00000480598 MS4A4AQ96JQ5 239 aa18.34■□□□□ 0.53
LIMS4-202ENST00000480598 ZNF341Q9BYN7 854 aa18.34■□□□□ 0.53
LIMS4-202ENST00000480598 GPR108Q9NPR9 543 aa18.34■□□□□ 0.53
LIMS4-202ENST00000480598 NOP58Q9Y2X3 529 aaKnown RBP18.34■□□□□ 0.53
LIMS4-202ENST00000480598 RFX7Q2KHR2 1363 aa18.33■□□□□ 0.53
LIMS4-202ENST00000480598 MROH7-TTC4A0A0A0MT08 1334 aa18.33■□□□□ 0.53
LIMS4-202ENST00000480598 SPDYE5A6NIY4 337 aa18.33■□□□□ 0.52
LIMS4-202ENST00000480598 INPP5BP32019 993 aa18.33■□□□□ 0.52
LIMS4-202ENST00000480598 BTDP43251 543 aa18.33■□□□□ 0.52
LIMS4-202ENST00000480598 RGS3P49796 1198 aa18.33■□□□□ 0.52
LIMS4-202ENST00000480598 SLF2Q8IX21 1173 aa18.33■□□□□ 0.52
LIMS4-202ENST00000480598 BRI3BPQ8WY22 251 aa18.33■□□□□ 0.52
LIMS4-202ENST00000480598 FAM163AQ96GL9 167 aaPredicted RBP18.33■□□□□ 0.52
LIMS4-202ENST00000480598 FKTNO75072 461 aa18.32■□□□□ 0.52
LIMS4-202ENST00000480598 UQCRFS1P1P0C7P4 283 aa18.32■□□□□ 0.52
LIMS4-202ENST00000480598 TTC39AQ5SRH9 613 aa18.32■□□□□ 0.52
LIMS4-202ENST00000480598 IDI2Q9BXS1 227 aa18.32■□□□□ 0.52
LIMS4-202ENST00000480598 SNRKQ9NRH2 765 aa18.32■□□□□ 0.52
LIMS4-202ENST00000480598 CCL15-CCL14A0A0B4J2E2 113 aa18.31■□□□□ 0.52
LIMS4-202ENST00000480598 WDHD1O75717 1129 aaPredicted RBP18.31■□□□□ 0.52
LIMS4-202ENST00000480598 GTF2A2P52657 109 aa18.31■□□□□ 0.52
LIMS4-202ENST00000480598 CRHR2Q13324 411 aa18.31■□□□□ 0.52
LIMS4-202ENST00000480598 CCL15Q16663 113 aa18.31■□□□□ 0.52
LIMS4-202ENST00000480598 OTUD7BQ6GQQ9 843 aa18.31■□□□□ 0.52
LIMS4-202ENST00000480598 ERO1BQ86YB8 467 aa18.31■□□□□ 0.52
LIMS4-202ENST00000480598 NSUN4Q96CB9 384 aaKnown RBP18.31■□□□□ 0.52
LIMS4-202ENST00000480598 DDX4Q9NQI0 724 aaKnown RBP18.31■□□□□ 0.52
LIMS4-202ENST00000480598 TLR7Q9NYK1 1049 aaKnown RBP18.31■□□□□ 0.52
LIMS4-202ENST00000480598 RAI14Q9P0K7 980 aa18.31■□□□□ 0.52
LIMS4-202ENST00000480598 RCAN3Q9UKA8 241 aa18.31■□□□□ 0.52
LIMS4-202ENST00000480598 DOCK2Q92608 1830 aa18.3■□□□□ 0.52
LIMS4-202ENST00000480598 GPR75-ASB3A0A0A6YYF3 556 aa18.3■□□□□ 0.52
LIMS4-202ENST00000480598 ENTPD3O75355 529 aa18.3■□□□□ 0.52
LIMS4-202ENST00000480598 MS4A1P11836 297 aa18.3■□□□□ 0.52
LIMS4-202ENST00000480598 RHBDL3P58872 404 aa18.3■□□□□ 0.52
LIMS4-202ENST00000480598 PICALMQ13492 652 aa18.3■□□□□ 0.52
LIMS4-202ENST00000480598 CCDC158Q5M9N0 1113 aa18.3■□□□□ 0.52
LIMS4-202ENST00000480598 SH3BP5LQ7L8J4 393 aa18.3■□□□□ 0.52
LIMS4-202ENST00000480598 CCDC8Q9H0W5 538 aaPredicted RBP18.3■□□□□ 0.52
LIMS4-202ENST00000480598 DBNLQ9UJU6 430 aaKnown RBP18.3■□□□□ 0.52
LIMS4-202ENST00000480598 EXOC6BQ9Y2D4 811 aa18.3■□□□□ 0.52
LIMS4-202ENST00000480598 COG6Q9Y2V7 657 aa18.3■□□□□ 0.52
LIMS4-202ENST00000480598 ATRNL1Q5VV63 1379 aa18.3■□□□□ 0.52
LIMS4-202ENST00000480598 IRF6O14896 467 aa18.29■□□□□ 0.52
LIMS4-202ENST00000480598 SLURP2P0DP57 97 aa18.29■□□□□ 0.52
LIMS4-202ENST00000480598 ZSCAN29Q8IWY8 852 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms