RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 USP40Q9NVE5 1235 aa14.11□□□□□ -0.15
TRAPPC12-219ENST00000479955 AATFQ9NY61 560 aaKnown RBP eCLIP14.11□□□□□ -0.15
TRAPPC12-219ENST00000479955 RPAP1Q9BWH6 1393 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC12-219ENST00000479955 WDR90Q96KV7 1748 aa14.1□□□□□ -0.15
TRAPPC12-219ENST00000479955 MBD4O95243 580 aa14.1□□□□□ -0.15
TRAPPC12-219ENST00000479955 EPHX2P34913 555 aa14.1□□□□□ -0.15
TRAPPC12-219ENST00000479955 EPS15P42566 896 aa14.1□□□□□ -0.15
TRAPPC12-219ENST00000479955 APOBEC3HQ6NTF7 200 aaKnown RBP14.1□□□□□ -0.15
TRAPPC12-219ENST00000479955 ADGRA1Q86SQ6 560 aa14.1□□□□□ -0.15
TRAPPC12-219ENST00000479955 MIGA1Q8NAN2 632 aa14.1□□□□□ -0.15
TRAPPC12-219ENST00000479955 OSBP2Q969R2 916 aa14.1□□□□□ -0.15
TRAPPC12-219ENST00000479955 PRMT6Q96LA8 375 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC12-219ENST00000479955 FAM227BQ96M60 508 aa14.1□□□□□ -0.15
TRAPPC12-219ENST00000479955 RIOK1Q9BRS2 568 aaKnown RBP14.1□□□□□ -0.15
TRAPPC12-219ENST00000479955 CRNKL1Q9BZJ0 848 aaKnown RBP14.1□□□□□ -0.15
TRAPPC12-219ENST00000479955 A0A0D9SFI3 127 aa14.09□□□□□ -0.15
TRAPPC12-219ENST00000479955 WNT10BO00744 389 aa14.09□□□□□ -0.15
TRAPPC12-219ENST00000479955 SGSM2O43147 1006 aa14.09□□□□□ -0.15
TRAPPC12-219ENST00000479955 GPAA1O43292 621 aa14.09□□□□□ -0.15
TRAPPC12-219ENST00000479955 TBC1D10BQ4KMP7 808 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC12-219ENST00000479955 FKBP1CQ5VVH2 108 aa14.09□□□□□ -0.15
TRAPPC12-219ENST00000479955 SAMD7Q7Z3H4 446 aa14.09□□□□□ -0.15
TRAPPC12-219ENST00000479955 ZC3H15Q8WU90 426 aaKnown RBP14.09□□□□□ -0.15
TRAPPC12-219ENST00000479955 ZBED3Q96IU2 234 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC12-219ENST00000479955 STRBPQ96SI9 672 aaKnown RBP14.09□□□□□ -0.15
TRAPPC12-219ENST00000479955 ESYT1Q9BSJ8 1104 aa14.09□□□□□ -0.15
TRAPPC12-219ENST00000479955 NACAP1Q9BZK3 213 aa14.09□□□□□ -0.15
TRAPPC12-219ENST00000479955 CCDC171Q6TFL3 1326 aa14.09□□□□□ -0.15
TRAPPC12-219ENST00000479955 PATL2C9JE40 543 aaKnown RBP14.08□□□□□ -0.16
TRAPPC12-219ENST00000479955 M0R2C6 588 aa14.08□□□□□ -0.16
TRAPPC12-219ENST00000479955 NPM3O75607 178 aaKnown RBP14.08□□□□□ -0.16
TRAPPC12-219ENST00000479955 REC8O95072 547 aa14.08□□□□□ -0.16
TRAPPC12-219ENST00000479955 USP5P45974 858 aa14.08□□□□□ -0.16
TRAPPC12-219ENST00000479955 TNNI2P48788 182 aa14.08□□□□□ -0.16
TRAPPC12-219ENST00000479955 TNFAIP1Q13829 316 aa14.08□□□□□ -0.16
TRAPPC12-219ENST00000479955 SLFNL1Q499Z3 407 aa14.08□□□□□ -0.16
TRAPPC12-219ENST00000479955 CDC42EP5Q6NZY7 148 aa14.08□□□□□ -0.16
TRAPPC12-219ENST00000479955 GIMAP6Q6P9H5 292 aa14.08□□□□□ -0.16
TRAPPC12-219ENST00000479955 TEX11Q8IYF3 940 aa14.08□□□□□ -0.16
TRAPPC12-219ENST00000479955 SEC62Q99442 399 aaKnown RBP14.08□□□□□ -0.16
TRAPPC12-219ENST00000479955 TAF1DQ9H5J8 278 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC12-219ENST00000479955 TDRD3Q9H7E2 651 aaKnown RBP14.08□□□□□ -0.16
TRAPPC12-219ENST00000479955 ARMT1Q9H993 441 aa14.08□□□□□ -0.16
TRAPPC12-219ENST00000479955 ATP8A2Q9NTI2 1148 aa14.08□□□□□ -0.16
TRAPPC12-219ENST00000479955 SLC4A4Q9Y6R1 1079 aa14.08□□□□□ -0.16
TRAPPC12-219ENST00000479955 UTRNP46939 3433 aa14.08□□□□□ -0.16
TRAPPC12-219ENST00000479955 EPB41L2O43491 1005 aaKnown RBP14.07□□□□□ -0.16
TRAPPC12-219ENST00000479955 CHGBP05060 677 aa14.07□□□□□ -0.16
TRAPPC12-219ENST00000479955 APPP05067 770 aa14.07□□□□□ -0.16
TRAPPC12-219ENST00000479955 RHBDL3P58872 404 aa14.07□□□□□ -0.16
TRAPPC12-219ENST00000479955 DYNLL1P63167 89 aaKnown RBP14.07□□□□□ -0.16
TRAPPC12-219ENST00000479955 SPDYE2Q495Y8 402 aa14.07□□□□□ -0.16
TRAPPC12-219ENST00000479955 AMOTL1Q8IY63 956 aa14.07□□□□□ -0.16
TRAPPC12-219ENST00000479955 LCORLQ8N3X6 602 aa14.07□□□□□ -0.16
TRAPPC12-219ENST00000479955 SH3RF3Q8TEJ3 882 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC12-219ENST00000479955 IDI2Q9BXS1 227 aa14.07□□□□□ -0.16
TRAPPC12-219ENST00000479955 RRAGCQ9HB90 399 aa14.07□□□□□ -0.16
TRAPPC12-219ENST00000479955 ZNF70Q9UC06 446 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC12-219ENST00000479955 SHTN1A0MZ66 631 aa14.06□□□□□ -0.16
TRAPPC12-219ENST00000479955 ENTPD3O75355 529 aa14.06□□□□□ -0.16
TRAPPC12-219ENST00000479955 NBPF9Q3BBW0 867 aa14.06□□□□□ -0.16
TRAPPC12-219ENST00000479955 APOBEC3FQ8IUX4 373 aaKnown RBP14.06□□□□□ -0.16
TRAPPC12-219ENST00000479955 DCPSQ96C86 337 aaKnown RBP14.06□□□□□ -0.16
TRAPPC12-219ENST00000479955 DSCC1Q9BVC3 393 aa14.06□□□□□ -0.16
TRAPPC12-219ENST00000479955 CTNNA3Q9UI47 895 aa14.06□□□□□ -0.16
TRAPPC12-219ENST00000479955 PITPNM2Q9BZ72 1349 aa14.06□□□□□ -0.16
TRAPPC12-219ENST00000479955 ECM29Q5VYK3 1845 aa14.06□□□□□ -0.16
TRAPPC12-219ENST00000479955 POTECB2RU33 542 aa14.05□□□□□ -0.16
TRAPPC12-219ENST00000479955 HSPD1P10809 573 aaKnown RBP14.05□□□□□ -0.16
TRAPPC12-219ENST00000479955 FAM83AQ86UY5 434 aa14.05□□□□□ -0.16
TRAPPC12-219ENST00000479955 TRPM4Q8TD43 1214 aa14.05□□□□□ -0.16
TRAPPC12-219ENST00000479955 TGFBRAP1Q8WUH2 860 aa14.05□□□□□ -0.16
TRAPPC12-219ENST00000479955 VEZTQ9HBM0 779 aa14.05□□□□□ -0.16
TRAPPC12-219ENST00000479955 GPBP1L1Q9HC44 474 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC12-219ENST00000479955 ANO2Q9NQ90 1003 aa14.05□□□□□ -0.16
TRAPPC12-219ENST00000479955 PGAP2Q9UHJ9 254 aa14.05□□□□□ -0.16
TRAPPC12-219ENST00000479955 PCDHAC2Q9Y5I4 1007 aa14.05□□□□□ -0.16
TRAPPC12-219ENST00000479955 CLRN2A0PK11 232 aa14.04□□□□□ -0.16
TRAPPC12-219ENST00000479955 WDHD1O75717 1129 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC12-219ENST00000479955 EGFRP00533 1210 aa14.04□□□□□ -0.16
TRAPPC12-219ENST00000479955 HIRAP54198 1017 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC12-219ENST00000479955 ALX1Q15699 326 aa14.04□□□□□ -0.16
TRAPPC12-219ENST00000479955 EAPPQ56P03 285 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC12-219ENST00000479955 CCDC129Q6ZRS4 1044 aa14.04□□□□□ -0.16
TRAPPC12-219ENST00000479955 ZNF589Q86UQ0 364 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC12-219ENST00000479955 IFNL3Q8IZI9 196 aa14.04□□□□□ -0.16
TRAPPC12-219ENST00000479955 ZNF526Q8TF50 670 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC12-219ENST00000479955 DHX36Q9H2U1 1008 aaKnown RBP14.04□□□□□ -0.16
TRAPPC12-219ENST00000479955 TAOK2Q9UL54 1235 aa14.04□□□□□ -0.16
TRAPPC12-219ENST00000479955 CLEC11AQ9Y240 323 aa14.04□□□□□ -0.16
TRAPPC12-219ENST00000479955 PPP2R3BQ9Y5P8 575 aa14.04□□□□□ -0.16
TRAPPC12-219ENST00000479955 GSG1L2A8MUP6 293 aa14.03□□□□□ -0.16
TRAPPC12-219ENST00000479955 TDO2P48775 406 aa14.03□□□□□ -0.16
TRAPPC12-219ENST00000479955 C8orf34Q49A92 452 aa14.03□□□□□ -0.16
TRAPPC12-219ENST00000479955 ANGEL2Q5VTE6 544 aaKnown RBP14.03□□□□□ -0.16
TRAPPC12-219ENST00000479955 TTC6Q86TZ1 520 aa14.03□□□□□ -0.16
TRAPPC12-219ENST00000479955 SULF1Q8IWU6 871 aa14.03□□□□□ -0.16
TRAPPC12-219ENST00000479955 FAM151AQ8WW52 585 aa14.03□□□□□ -0.16
TRAPPC12-219ENST00000479955 MAP4K1Q92918 833 aa14.03□□□□□ -0.16
TRAPPC12-219ENST00000479955 HOOK2Q96ED9 719 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms