RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 KIF28PB7ZC32 967 aa15.38■□□□□ 0.05
PDZRN3-208ENST00000479530 POLR3GO15318 223 aaPredicted RBP15.38■□□□□ 0.05
PDZRN3-208ENST00000479530 METTL24Q5JXM2 366 aa15.38■□□□□ 0.05
PDZRN3-208ENST00000479530 LDHAL6AQ6ZMR3 332 aa15.38■□□□□ 0.05
PDZRN3-208ENST00000479530 BPIFA3Q9BQP9 254 aa15.38■□□□□ 0.05
PDZRN3-208ENST00000479530 SENP2Q9HC62 589 aa15.38■□□□□ 0.05
PDZRN3-208ENST00000479530 ORC3Q9UBD5 711 aaPredicted RBP15.38■□□□□ 0.05
PDZRN3-208ENST00000479530 TBC1D2BQ9UPU7 963 aa15.38■□□□□ 0.05
PDZRN3-208ENST00000479530 MROH7-TTC4A0A0A0MT08 1334 aa15.38■□□□□ 0.05
PDZRN3-208ENST00000479530 SPTLC2O15270 562 aa15.38■□□□□ 0.05
PDZRN3-208ENST00000479530 PRC1O43663 620 aa15.38■□□□□ 0.05
PDZRN3-208ENST00000479530 RXRAP19793 462 aa15.38■□□□□ 0.05
PDZRN3-208ENST00000479530 NLRP10Q86W26 655 aa15.38■□□□□ 0.05
PDZRN3-208ENST00000479530 FAM177A1Q8N128 213 aaPredicted RBP15.38■□□□□ 0.05
PDZRN3-208ENST00000479530 NUP188Q5SRE5 1749 aa15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 GPAA1O43292 621 aa15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 NLRP12P59046 1061 aa15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 KIF6Q6ZMV9 814 aa15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 ZNF274Q96GC6 653 aaPredicted RBP15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 AIFM3Q96NN9 605 aa15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 PIH1D3Q9NQM4 214 aaKnown RBP15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 BTG4Q9NY30 223 aa15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 KLF18A0A0U1RQI7 1052 aa15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 WDHD1O75717 1129 aaPredicted RBP15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 URI1O94763 535 aaPredicted RBP15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 PFKFB1P16118 471 aa15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 CAPN2P17655 700 aa15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 MARCKSP29966 332 aaPredicted RBP15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 HNRNPH2P55795 449 aaKnown RBP15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 TRIM28Q13263 835 aaKnown RBP15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 AXDND1Q5T1B0 1012 aaPredicted RBP15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 UBXN4Q92575 508 aa15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 UTP14AQ9BVJ6 771 aaKnown RBP15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 CARD6Q9BX69 1037 aa15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 TMX1Q9H3N1 280 aa15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 ZCCHC17Q9NP64 241 aaKnown RBP15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 ZBTB1Q9Y2K1 713 aa15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 LAMB4A4D0S4 1761 aa15.37■□□□□ 0.05
PDZRN3-208ENST00000479530 TMEM232C9JQI7 657 aa15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 MYSM1Q5VVJ2 828 aa15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 MB21D2Q8IYB1 491 aaPredicted RBP15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 SASH3O75995 380 aa15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 MAPK8IP2Q13387 824 aaPredicted RBP15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 GIGYF2Q6Y7W6 1299 aaKnown RBP15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 C8orf76Q96K31 380 aa15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 AKAP2Q9Y2D5 859 aa15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 UBE2Q2LH0YL09 131 aa15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 TADA3O75528 432 aa15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 KCNJ6P48051 423 aa15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 HSP90AA4PQ58FG1 418 aa15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 REXO1L1PQ8IX06 675 aa15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 NEK11Q8NG66 645 aa15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 KCNG4Q8TDN1 519 aa15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 APPBP2Q92624 585 aa15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 POLR3EQ9NVU0 708 aa15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 PARP3Q9Y6F1 533 aa15.36■□□□□ 0.05
PDZRN3-208ENST00000479530 MAP3K15Q6ZN16 1313 aa15.35■□□□□ 0.05
PDZRN3-208ENST00000479530 RIC1Q4ADV7 1423 aa15.35■□□□□ 0.05
PDZRN3-208ENST00000479530 GOLGA8BA8MQT2 603 aa15.35■□□□□ 0.05
PDZRN3-208ENST00000479530 PHKA1P46020 1223 aa15.35■□□□□ 0.05
PDZRN3-208ENST00000479530 IMMTQ16891 758 aaKnown RBP15.35■□□□□ 0.05
PDZRN3-208ENST00000479530 SLC9C2Q5TAH2 1124 aa15.35■□□□□ 0.05
PDZRN3-208ENST00000479530 TMCO3Q6UWJ1 677 aa15.35■□□□□ 0.05
PDZRN3-208ENST00000479530 FBXO18Q8NFZ0 1043 aa15.35■□□□□ 0.05
PDZRN3-208ENST00000479530 PLEKHG2Q9H7P9 1386 aa15.35■□□□□ 0.05
PDZRN3-208ENST00000479530 PHLPP2Q6ZVD8 1323 aa15.35■□□□□ 0.05
PDZRN3-208ENST00000479530 IRS4O14654 1257 aaPredicted RBP15.35■□□□□ 0.05
PDZRN3-208ENST00000479530 IDH1O75874 414 aaKnown RBP15.35■□□□□ 0.05
PDZRN3-208ENST00000479530 ST5P78524 1137 aa15.35■□□□□ 0.05
PDZRN3-208ENST00000479530 TBC1D10CQ8IV04 446 aa15.35■□□□□ 0.05
PDZRN3-208ENST00000479530 CNNM1Q9NRU3 951 aa15.35■□□□□ 0.05
PDZRN3-208ENST00000479530 UBR2Q8IWV8 1755 aa15.34■□□□□ 0.05
PDZRN3-208ENST00000479530 STARD3NLO95772 234 aa15.34■□□□□ 0.05
PDZRN3-208ENST00000479530 UBASH3AP57075 661 aa15.34■□□□□ 0.05
PDZRN3-208ENST00000479530 CYB5R4Q7L1T6 521 aa15.34■□□□□ 0.05
PDZRN3-208ENST00000479530 PLA2G12BQ9BX93 195 aa15.34■□□□□ 0.05
PDZRN3-208ENST00000479530 CALCOCO1Q9P1Z2 691 aa15.34■□□□□ 0.05
PDZRN3-208ENST00000479530 TRMT112Q9UI30 125 aaKnown RBP15.34■□□□□ 0.05
PDZRN3-208ENST00000479530 WWC3Q9ULE0 1092 aa15.34■□□□□ 0.05
PDZRN3-208ENST00000479530 KAT6BQ8WYB5 2073 aa15.34■□□□□ 0.05
PDZRN3-208ENST00000479530 YEATS4O95619 227 aa15.34■□□□□ 0.05
PDZRN3-208ENST00000479530 CYP19A1P11511 503 aaPredicted RBP15.34■□□□□ 0.05
PDZRN3-208ENST00000479530 EVCP57679 992 aa15.34■□□□□ 0.05
PDZRN3-208ENST00000479530 MNS1Q8NEH6 495 aa15.34■□□□□ 0.05
PDZRN3-208ENST00000479530 VWA3AA6NCI4 1184 aa15.33■□□□□ 0.04
PDZRN3-208ENST00000479530 ZNF213O14771 459 aa15.33■□□□□ 0.04
PDZRN3-208ENST00000479530 CTSWP56202 376 aa15.33■□□□□ 0.04
PDZRN3-208ENST00000479530 PNOCQ13519 176 aa15.33■□□□□ 0.04
PDZRN3-208ENST00000479530 CFAP100Q494V2 611 aa15.33■□□□□ 0.04
PDZRN3-208ENST00000479530 VGLL2Q8N8G2 317 aa15.33■□□□□ 0.04
PDZRN3-208ENST00000479530 WDR24Q96S15 920 aa15.33■□□□□ 0.04
PDZRN3-208ENST00000479530 PARP4Q9UKK3 1724 aaKnown RBP15.33■□□□□ 0.04
PDZRN3-208ENST00000479530 SERPINC1P01008 464 aa15.33■□□□□ 0.04
PDZRN3-208ENST00000479530 APPP05067 770 aa15.33■□□□□ 0.04
PDZRN3-208ENST00000479530 ANO1Q5XXA6 986 aa15.33■□□□□ 0.04
PDZRN3-208ENST00000479530 ZBTB9Q96C00 473 aa15.33■□□□□ 0.04
PDZRN3-208ENST00000479530 UBN2Q6ZU65 1347 aa15.32■□□□□ 0.04
PDZRN3-208ENST00000479530 TULP2O00295 520 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms