RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 IFIT1P09914 478 aaKnown RBP12.12□□□□□ -0.47
CCM2-210ENST00000478169 PUM3Q15397 648 aaKnown RBP12.12□□□□□ -0.47
CCM2-210ENST00000478169 ZNF341Q9BYN7 854 aa12.12□□□□□ -0.47
CCM2-210ENST00000478169 TRIOBPQ9H2D6 2365 aa12.12□□□□□ -0.47
CCM2-210ENST00000478169 MGAMO43451 1857 aa12.11□□□□□ -0.47
CCM2-210ENST00000478169 FGFR2P21802 821 aa12.11□□□□□ -0.47
CCM2-210ENST00000478169 FXR1P51114 621 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCM2-210ENST00000478169 C17orf99Q6UX52 265 aa12.11□□□□□ -0.47
CCM2-210ENST00000478169 WDR66Q8TBY9 1149 aa12.11□□□□□ -0.47
CCM2-210ENST00000478169 FAM151AQ8WW52 585 aa12.11□□□□□ -0.47
CCM2-210ENST00000478169 ARHGAP39Q9C0H5 1083 aa12.11□□□□□ -0.47
CCM2-210ENST00000478169 PTPRCP08575 1304 aa12.11□□□□□ -0.47
CCM2-210ENST00000478169 HOXD10P28358 340 aa12.1□□□□□ -0.47
CCM2-210ENST00000478169 ANKRD23Q86SG2 305 aa12.1□□□□□ -0.47
CCM2-210ENST00000478169 MRPL50Q8N5N7 158 aaKnown RBP12.1□□□□□ -0.47
CCM2-210ENST00000478169 KLHDC4Q8TBB5 520 aa12.1□□□□□ -0.47
CCM2-210ENST00000478169 SH3TC2Q8TF17 1288 aa12.1□□□□□ -0.47
CCM2-210ENST00000478169 ZNF112Q9UJU3 913 aa12.1□□□□□ -0.47
CCM2-210ENST00000478169 KCNH4Q9UQ05 1017 aa12.1□□□□□ -0.47
CCM2-210ENST00000478169 SLC5A1P13866 664 aa12.09□□□□□ -0.47
CCM2-210ENST00000478169 MIGA2Q7L4E1 593 aa12.09□□□□□ -0.47
CCM2-210ENST00000478169 LPIN2Q92539 896 aa12.09□□□□□ -0.47
CCM2-210ENST00000478169 USP44Q9H0E7 712 aa12.09□□□□□ -0.47
CCM2-210ENST00000478169 SRRDQ9UH36 339 aa12.09□□□□□ -0.47
CCM2-210ENST00000478169 COLQQ9Y215 455 aaPredicted RBP12.09□□□□□ -0.47
CCM2-210ENST00000478169 MYH2Q9UKX2 1941 aa12.09□□□□□ -0.47
CCM2-210ENST00000478169 EYA2O00167 538 aa12.08□□□□□ -0.48
CCM2-210ENST00000478169 PDHXO00330 501 aa12.08□□□□□ -0.48
CCM2-210ENST00000478169 MYCP01106 439 aaPredicted RBP12.08□□□□□ -0.48
CCM2-210ENST00000478169 INPP5BP32019 993 aa12.08□□□□□ -0.48
CCM2-210ENST00000478169 ZEB1P37275 1124 aaPredicted RBP12.08□□□□□ -0.48
CCM2-210ENST00000478169 PSMC4P43686 418 aa12.08□□□□□ -0.48
CCM2-210ENST00000478169 NOL9Q5SY16 702 aaKnown RBP12.08□□□□□ -0.48
CCM2-210ENST00000478169 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.08□□□□□ -0.48
CCM2-210ENST00000478169 NKX2-3Q8TAU0 364 aa12.08□□□□□ -0.48
CCM2-210ENST00000478169 CPA4Q9UI42 421 aa12.08□□□□□ -0.48
CCM2-210ENST00000478169 DAGLAQ9Y4D2 1042 aa12.08□□□□□ -0.48
CCM2-210ENST00000478169 ZNF521Q96K83 1311 aa12.08□□□□□ -0.48
CCM2-210ENST00000478169 ADGRA2Q96PE1 1338 aa12.08□□□□□ -0.48
CCM2-210ENST00000478169 H0YGN5 161 aa12.07□□□□□ -0.48
CCM2-210ENST00000478169 CTGFP29279 349 aa12.07□□□□□ -0.48
CCM2-210ENST00000478169 RFX5P48382 616 aaPredicted RBP12.07□□□□□ -0.48
CCM2-210ENST00000478169 CDC42EP5Q6NZY7 148 aa12.07□□□□□ -0.48
CCM2-210ENST00000478169 DOCK3Q8IZD9 2030 aa12.07□□□□□ -0.48
CCM2-210ENST00000478169 FAM9BQ8IZU0 186 aa12.07□□□□□ -0.48
CCM2-210ENST00000478169 RAET1EQ8TD07 263 aa12.07□□□□□ -0.48
CCM2-210ENST00000478169 TRIM47Q96LD4 638 aa12.07□□□□□ -0.48
CCM2-210ENST00000478169 GNL3LQ9NVN8 582 aaKnown RBP12.07□□□□□ -0.48
CCM2-210ENST00000478169 FBXO3Q9UK99 471 aa12.07□□□□□ -0.48
CCM2-210ENST00000478169 DOCK2Q92608 1830 aa12.07□□□□□ -0.48
CCM2-210ENST00000478169 PTPRFP10586 1907 aa12.06□□□□□ -0.48
CCM2-210ENST00000478169 CXCL11O14625 94 aa12.06□□□□□ -0.48
CCM2-210ENST00000478169 FMNL1O95466 1100 aaPredicted RBP12.06□□□□□ -0.48
CCM2-210ENST00000478169 OSBPP22059 807 aa12.06□□□□□ -0.48
CCM2-210ENST00000478169 GRK4P32298 578 aa12.06□□□□□ -0.48
CCM2-210ENST00000478169 TCP10Q12799 353 aa12.06□□□□□ -0.48
CCM2-210ENST00000478169 MOGSQ13724 837 aa12.06□□□□□ -0.48
CCM2-210ENST00000478169 ATG9AQ7Z3C6 839 aa12.06□□□□□ -0.48
CCM2-210ENST00000478169 PARK7Q99497 189 aaKnown RBP12.06□□□□□ -0.48
CCM2-210ENST00000478169 SALL1Q9NSC2 1324 aa12.06□□□□□ -0.48
CCM2-210ENST00000478169 SEMA3EO15041 775 aa12.05□□□□□ -0.48
CCM2-210ENST00000478169 ZBTB22O15209 634 aa12.05□□□□□ -0.48
CCM2-210ENST00000478169 CIAO1O76071 339 aa12.05□□□□□ -0.48
CCM2-210ENST00000478169 LDHBP07195 334 aaKnown RBP12.05□□□□□ -0.48
CCM2-210ENST00000478169 GJB1P08034 283 aa12.05□□□□□ -0.48
CCM2-210ENST00000478169 BCRP11274 1271 aa12.05□□□□□ -0.48
CCM2-210ENST00000478169 GJA8P48165 433 aa12.05□□□□□ -0.48
CCM2-210ENST00000478169 NFIAQ12857 509 aa12.05□□□□□ -0.48
CCM2-210ENST00000478169 MTFR1Q15390 333 aa12.05□□□□□ -0.48
CCM2-210ENST00000478169 DIXDC1Q155Q3 683 aa12.05□□□□□ -0.48
CCM2-210ENST00000478169 SSH1Q8WYL5 1049 aa12.05□□□□□ -0.48
CCM2-210ENST00000478169 SHISA4Q96DD7 197 aa12.05□□□□□ -0.48
CCM2-210ENST00000478169 USP40Q9NVE5 1235 aa12.05□□□□□ -0.48
CCM2-210ENST00000478169 FAM198AQ9UFP1 575 aa12.05□□□□□ -0.48
CCM2-210ENST00000478169 MYPNQ86TC9 1320 aa12.05□□□□□ -0.48
CCM2-210ENST00000478169 ECM2O94769 699 aaPredicted RBP12.04□□□□□ -0.48
CCM2-210ENST00000478169 PRDX5P30044 214 aa12.04□□□□□ -0.48
CCM2-210ENST00000478169 FCGRTP55899 365 aa12.04□□□□□ -0.48
CCM2-210ENST00000478169 UBXN2AP68543 259 aa12.04□□□□□ -0.48
CCM2-210ENST00000478169 ATP2B3Q16720 1220 aa12.04□□□□□ -0.48
CCM2-210ENST00000478169 GPAT2Q6NUI2 795 aa12.04□□□□□ -0.48
CCM2-210ENST00000478169 FASTKD5Q7L8L6 764 aaKnown RBP12.04□□□□□ -0.48
CCM2-210ENST00000478169 DPF3Q92784 378 aa12.04□□□□□ -0.48
CCM2-210ENST00000478169 HTATIP2Q9BUP3 242 aa12.04□□□□□ -0.48
CCM2-210ENST00000478169 IDI2Q9BXS1 227 aa12.04□□□□□ -0.48
CCM2-210ENST00000478169 CEP126Q9P2H0 1117 aa12.04□□□□□ -0.48
CCM2-210ENST00000478169 DENND2AQ9ULE3 1009 aa12.04□□□□□ -0.48
CCM2-210ENST00000478169 PHIPQ8WWQ0 1821 aa12.04□□□□□ -0.48
CCM2-210ENST00000478169 PHF20L1A8MW92 1017 aa12.03□□□□□ -0.48
CCM2-210ENST00000478169 E9PSI1 815 aa12.03□□□□□ -0.48
CCM2-210ENST00000478169 ENTPD3O75355 529 aa12.03□□□□□ -0.48
CCM2-210ENST00000478169 CCL5P13501 91 aa12.03□□□□□ -0.48
CCM2-210ENST00000478169 CAPN2P17655 700 aa12.03□□□□□ -0.48
CCM2-210ENST00000478169 CACNB1Q02641 598 aaPredicted RBP12.03□□□□□ -0.48
CCM2-210ENST00000478169 ALDH1L2Q3SY69 923 aa12.03□□□□□ -0.48
CCM2-210ENST00000478169 UBE2Q1Q7Z7E8 422 aa12.03□□□□□ -0.48
CCM2-210ENST00000478169 ZGPATQ8N5A5 531 aaKnown RBP12.03□□□□□ -0.48
CCM2-210ENST00000478169 RNF208Q9H0X6 261 aa12.03□□□□□ -0.48
CCM2-210ENST00000478169 BIN2Q9UBW5 565 aaPredicted RBP12.03□□□□□ -0.48
CCM2-210ENST00000478169 HDAC5Q9UQL6 1122 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms