RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 MYPNQ86TC9 1320 aa25.62■■□□□ 1.69
PDLIM1-202ENST00000477757 A0A0C4DFX4 3053 aa25.61■■□□□ 1.69
PDLIM1-202ENST00000477757 PDHXO00330 501 aa25.61■■□□□ 1.69
PDLIM1-202ENST00000477757 MRIQ9BWK5 157 aa25.61■■□□□ 1.69
PDLIM1-202ENST00000477757 ZNF341Q9BYN7 854 aa25.61■■□□□ 1.69
PDLIM1-202ENST00000477757 KCNH4Q9UQ05 1017 aa25.61■■□□□ 1.69
PDLIM1-202ENST00000477757 FMNL1O95466 1100 aaPredicted RBP25.6■■□□□ 1.69
PDLIM1-202ENST00000477757 APOBEC3HQ6NTF7 200 aaKnown RBP25.6■■□□□ 1.69
PDLIM1-202ENST00000477757 C9orf78Q9NZ63 289 aaPredicted RBP25.6■■□□□ 1.69
PDLIM1-202ENST00000477757 NR2E3Q9Y5X4 410 aa25.6■■□□□ 1.69
PDLIM1-202ENST00000477757 MAST3O60307 1309 aa25.6■■□□□ 1.69
PDLIM1-202ENST00000477757 INPP5BP32019 993 aa25.59■■□□□ 1.69
PDLIM1-202ENST00000477757 RNF208Q9H0X6 261 aa25.59■■□□□ 1.69
PDLIM1-202ENST00000477757 A0A1W2PPC1 479 aa25.58■■□□□ 1.69
PDLIM1-202ENST00000477757 ZBTB7BO15156 539 aaPredicted RBP25.58■■□□□ 1.69
PDLIM1-202ENST00000477757 FARP2O94887 1054 aaPredicted RBP25.58■■□□□ 1.69
PDLIM1-202ENST00000477757 UBXN2AP68543 259 aa25.58■■□□□ 1.69
PDLIM1-202ENST00000477757 MOGSQ13724 837 aa25.58■■□□□ 1.69
PDLIM1-202ENST00000477757 NCBP3Q53F19 620 aaKnown RBP25.58■■□□□ 1.69
PDLIM1-202ENST00000477757 SUGT1Q9Y2Z0 365 aa25.58■■□□□ 1.69
PDLIM1-202ENST00000477757 FRAT2O75474 233 aaPredicted RBP25.57■■□□□ 1.68
PDLIM1-202ENST00000477757 ALDH1L1O75891 902 aa25.57■■□□□ 1.68
PDLIM1-202ENST00000477757 PRKCZQ05513 592 aa25.57■■□□□ 1.68
PDLIM1-202ENST00000477757 CAVIN4Q5BKX8 364 aa25.57■■□□□ 1.68
PDLIM1-202ENST00000477757 U2AF1L4Q8WU68 220 aaKnown RBP25.57■■□□□ 1.68
PDLIM1-202ENST00000477757 KAZALD1Q96I82 304 aa25.57■■□□□ 1.68
PDLIM1-202ENST00000477757 CUL9Q8IWT3 2517 aa25.57■■□□□ 1.68
PDLIM1-202ENST00000477757 DLL1O00548 723 aa25.56■■□□□ 1.68
PDLIM1-202ENST00000477757 HHIPL2Q6UWX4 724 aa25.56■■□□□ 1.68
PDLIM1-202ENST00000477757 MIGA2Q7L4E1 593 aa25.56■■□□□ 1.68
PDLIM1-202ENST00000477757 SLAIN1Q8ND83 568 aa25.56■■□□□ 1.68
PDLIM1-202ENST00000477757 SLC17A8Q8NDX2 589 aa25.56■■□□□ 1.68
PDLIM1-202ENST00000477757 SUCLG2Q96I99 432 aa25.56■■□□□ 1.68
PDLIM1-202ENST00000477757 PARK7Q99497 189 aaKnown RBP25.56■■□□□ 1.68
PDLIM1-202ENST00000477757 BIN2Q9UBW5 565 aaPredicted RBP25.56■■□□□ 1.68
PDLIM1-202ENST00000477757 ZNF112Q9UJU3 913 aa25.56■■□□□ 1.68
PDLIM1-202ENST00000477757 BCRP11274 1271 aa25.55■■□□□ 1.68
PDLIM1-202ENST00000477757 VGLL2Q8N8G2 317 aa25.55■■□□□ 1.68
PDLIM1-202ENST00000477757 MGAMO43451 1857 aa25.54■■□□□ 1.68
PDLIM1-202ENST00000477757 FCGRTP55899 365 aa25.54■■□□□ 1.68
PDLIM1-202ENST00000477757 EXOSC9Q06265 439 aaKnown RBP25.54■■□□□ 1.68
PDLIM1-202ENST00000477757 NOL9Q5SY16 702 aaKnown RBP25.54■■□□□ 1.68
PDLIM1-202ENST00000477757 METTL24Q5JXM2 366 aa25.53■■□□□ 1.68
PDLIM1-202ENST00000477757 FAM151AQ8WW52 585 aa25.53■■□□□ 1.68
PDLIM1-202ENST00000477757 SRCIN1Q9C0H9 1055 aa25.53■■□□□ 1.68
PDLIM1-202ENST00000477757 UNC93B1Q9H1C4 597 aa25.53■■□□□ 1.68
PDLIM1-202ENST00000477757 KIF16BQ96L93 1317 aa25.53■■□□□ 1.68
PDLIM1-202ENST00000477757 LRRC24Q50LG9 513 aa25.52■■□□□ 1.68
PDLIM1-202ENST00000477757 PDE8BO95263 885 aa25.51■■□□□ 1.67
PDLIM1-202ENST00000477757 BCAMP50895 628 aa25.51■■□□□ 1.67
PDLIM1-202ENST00000477757 RABL6Q3YEC7 729 aaPredicted RBP25.51■■□□□ 1.67
PDLIM1-202ENST00000477757 UTYO14607 1347 aa25.51■■□□□ 1.67
PDLIM1-202ENST00000477757 SOX1O00570 391 aaPredicted RBP25.5■■□□□ 1.67
PDLIM1-202ENST00000477757 SGPL1O95470 568 aa25.5■■□□□ 1.67
PDLIM1-202ENST00000477757 NBPF7P0C2Y1 421 aaPredicted RBP25.5■■□□□ 1.67
PDLIM1-202ENST00000477757 CYP2C8P10632 490 aa25.5■■□□□ 1.67
PDLIM1-202ENST00000477757 GPAT2Q6NUI2 795 aa25.5■■□□□ 1.67
PDLIM1-202ENST00000477757 SLC4A10Q6U841 1118 aa25.5■■□□□ 1.67
PDLIM1-202ENST00000477757 GABRQQ9UN88 632 aa25.5■■□□□ 1.67
PDLIM1-202ENST00000477757 CAPN2P17655 700 aa25.49■■□□□ 1.67
PDLIM1-202ENST00000477757 CCDC184Q52MB2 194 aa25.49■■□□□ 1.67
PDLIM1-202ENST00000477757 WDR63Q8IWG1 891 aa25.49■■□□□ 1.67
PDLIM1-202ENST00000477757 BICC1Q9H694 974 aaKnown RBP25.49■■□□□ 1.67
PDLIM1-202ENST00000477757 MYH13Q9UKX3 1938 aa25.49■■□□□ 1.67
PDLIM1-202ENST00000477757 CXCL11O14625 94 aa25.48■■□□□ 1.67
PDLIM1-202ENST00000477757 ADCY3O60266 1144 aa25.48■■□□□ 1.67
PDLIM1-202ENST00000477757 EVI5O60447 810 aa25.48■■□□□ 1.67
PDLIM1-202ENST00000477757 DAGLAQ9Y4D2 1042 aa25.48■■□□□ 1.67
PDLIM1-202ENST00000477757 TCP10Q12799 353 aa25.47■■□□□ 1.67
PDLIM1-202ENST00000477757 ANKRD44Q8N8A2 993 aa25.47■■□□□ 1.67
PDLIM1-202ENST00000477757 ATRNL1Q5VV63 1379 aa25.46■■□□□ 1.67
PDLIM1-202ENST00000477757 INHAP05111 366 aa25.46■■□□□ 1.67
PDLIM1-202ENST00000477757 FGFR2P21802 821 aa25.46■■□□□ 1.67
PDLIM1-202ENST00000477757 FLT3LGP49771 235 aa25.46■■□□□ 1.67
PDLIM1-202ENST00000477757 NFIAQ12857 509 aa25.46■■□□□ 1.67
PDLIM1-202ENST00000477757 PUM3Q15397 648 aaKnown RBP25.46■■□□□ 1.67
PDLIM1-202ENST00000477757 CDC42EP5Q6NZY7 148 aa25.46■■□□□ 1.67
PDLIM1-202ENST00000477757 PXYLP1Q8TE99 480 aa25.46■■□□□ 1.67
PDLIM1-202ENST00000477757 LRCH3Q96II8 777 aa25.46■■□□□ 1.67
PDLIM1-202ENST00000477757 DOCK2Q92608 1830 aa25.46■■□□□ 1.67
PDLIM1-202ENST00000477757 A0A0G2JLL6 359 aaPredicted RBP25.45■■□□□ 1.66
PDLIM1-202ENST00000477757 IFIT1P09914 478 aaKnown RBP25.45■■□□□ 1.66
PDLIM1-202ENST00000477757 ELNP15502 786 aa25.45■■□□□ 1.66
PDLIM1-202ENST00000477757 PRRT2Q7Z6L0 340 aaPredicted RBP25.45■■□□□ 1.66
PDLIM1-202ENST00000477757 WDR66Q8TBY9 1149 aa25.45■■□□□ 1.66
PDLIM1-202ENST00000477757 PAK6Q9NQU5 681 aaPredicted RBP25.45■■□□□ 1.66
PDLIM1-202ENST00000477757 ALPK3Q96L96 1907 aa25.44■■□□□ 1.66
PDLIM1-202ENST00000477757 IRF5Q13568 498 aa25.44■■□□□ 1.66
PDLIM1-202ENST00000477757 FAM198AQ9UFP1 575 aa25.44■■□□□ 1.66
PDLIM1-202ENST00000477757 AK9Q5TCS8 1911 aa25.43■■□□□ 1.66
PDLIM1-202ENST00000477757 DIXDC1Q155Q3 683 aa25.43■■□□□ 1.66
PDLIM1-202ENST00000477757 FASTKD5Q7L8L6 764 aaKnown RBP25.43■■□□□ 1.66
PDLIM1-202ENST00000477757 DEFB118Q96PH6 123 aa25.43■■□□□ 1.66
PDLIM1-202ENST00000477757 STAP2Q9UGK3 403 aa25.43■■□□□ 1.66
PDLIM1-202ENST00000477757 SLC45A1Q9Y2W3 748 aa25.43■■□□□ 1.66
PDLIM1-202ENST00000477757 PTPRFP10586 1907 aa25.42■■□□□ 1.66
PDLIM1-202ENST00000477757 TNPO2O14787 897 aaKnown RBP25.42■■□□□ 1.66
PDLIM1-202ENST00000477757 TFRCP02786 760 aaKnown RBP25.42■■□□□ 1.66
PDLIM1-202ENST00000477757 SCYL3Q8IZE3 742 aa25.42■■□□□ 1.66
PDLIM1-202ENST00000477757 KLHDC4Q8TBB5 520 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms