RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 RPAP2Q8IXW5 612 aaPredicted RBP17.39■□□□□ 0.37
PDE6D-204ENST00000477748 ANKRD13AQ8IZ07 590 aa17.39■□□□□ 0.37
PDE6D-204ENST00000477748 GPR108Q9NPR9 543 aa17.39■□□□□ 0.37
PDE6D-204ENST00000477748 FZD1Q9UP38 647 aa17.39■□□□□ 0.37
PDE6D-204ENST00000477748 FPGT-TNNI3KV9GXZ4 949 aa17.39■□□□□ 0.37
PDE6D-204ENST00000477748 SALL1Q9NSC2 1324 aa17.39■□□□□ 0.37
PDE6D-204ENST00000477748 PRDX5P30044 214 aa17.38■□□□□ 0.37
PDE6D-204ENST00000477748 HHIPL2Q6UWX4 724 aa17.38■□□□□ 0.37
PDE6D-204ENST00000477748 ZGPATQ8N5A5 531 aaKnown RBP17.38■□□□□ 0.37
PDE6D-204ENST00000477748 WNK4Q96J92 1243 aa17.38■□□□□ 0.37
PDE6D-204ENST00000477748 CLMNQ96JQ2 1002 aa17.38■□□□□ 0.37
PDE6D-204ENST00000477748 ZDHHC15Q96MV8 337 aa17.38■□□□□ 0.37
PDE6D-204ENST00000477748 TMOD2Q9NZR1 351 aa17.38■□□□□ 0.37
PDE6D-204ENST00000477748 HMMRO75330 724 aa17.37■□□□□ 0.37
PDE6D-204ENST00000477748 USP2O75604 605 aaPredicted RBP17.37■□□□□ 0.37
PDE6D-204ENST00000477748 TBC1D8O95759 1140 aa17.37■□□□□ 0.37
PDE6D-204ENST00000477748 ABCF2Q9UG63 623 aa17.37■□□□□ 0.37
PDE6D-204ENST00000477748 EXOC6BQ9Y2D4 811 aa17.37■□□□□ 0.37
PDE6D-204ENST00000477748 PDS5AQ29RF7 1337 aaKnown RBP17.37■□□□□ 0.37
PDE6D-204ENST00000477748 TCP10L2B9ZVM9 353 aa17.36■□□□□ 0.37
PDE6D-204ENST00000477748 UQCRFS1P1P0C7P4 283 aa17.36■□□□□ 0.37
PDE6D-204ENST00000477748 PKN2Q16513 984 aaKnown RBP17.36■□□□□ 0.37
PDE6D-204ENST00000477748 HSP90AB4PQ58FF6 505 aa17.36■□□□□ 0.37
PDE6D-204ENST00000477748 FKBP1CQ5VVH2 108 aa17.36■□□□□ 0.37
PDE6D-204ENST00000477748 ERC1Q8IUD2 1116 aa17.36■□□□□ 0.37
PDE6D-204ENST00000477748 ZNF296Q8WUU4 475 aaPredicted RBP17.36■□□□□ 0.37
PDE6D-204ENST00000477748 TEPSINQ96N21 525 aa17.36■□□□□ 0.37
PDE6D-204ENST00000477748 DBNDD2Q9BQY9 259 aa17.36■□□□□ 0.37
PDE6D-204ENST00000477748 HMG20BQ9P0W2 317 aa17.36■□□□□ 0.37
PDE6D-204ENST00000477748 MYH2Q9UKX2 1941 aa17.36■□□□□ 0.37
PDE6D-204ENST00000477748 GPR25O00155 361 aa17.35■□□□□ 0.37
PDE6D-204ENST00000477748 ARID4AP29374 1257 aaPredicted RBP17.35■□□□□ 0.37
PDE6D-204ENST00000477748 DIXDC1Q155Q3 683 aa17.35■□□□□ 0.37
PDE6D-204ENST00000477748 CCDC158Q5M9N0 1113 aa17.35■□□□□ 0.37
PDE6D-204ENST00000477748 TTC39AQ5SRH9 613 aa17.35■□□□□ 0.37
PDE6D-204ENST00000477748 SPTY2D1Q68D10 685 aaPredicted RBP17.35■□□□□ 0.37
PDE6D-204ENST00000477748 APOBEC3HQ6NTF7 200 aaKnown RBP17.35■□□□□ 0.37
PDE6D-204ENST00000477748 FAM83AQ86UY5 434 aa17.35■□□□□ 0.37
PDE6D-204ENST00000477748 IFNL1Q8IU54 200 aa17.35■□□□□ 0.37
PDE6D-204ENST00000477748 SPATA5Q8NB90 893 aa17.35■□□□□ 0.37
PDE6D-204ENST00000477748 HOOK2Q96ED9 719 aa17.35■□□□□ 0.37
PDE6D-204ENST00000477748 TMEM39BQ9GZU3 492 aa17.35■□□□□ 0.37
PDE6D-204ENST00000477748 CACNB3P54284 484 aa17.34■□□□□ 0.37
PDE6D-204ENST00000477748 PI16Q6UXB8 463 aa17.34■□□□□ 0.37
PDE6D-204ENST00000477748 ERICH6Q7L0X2 663 aa17.34■□□□□ 0.37
PDE6D-204ENST00000477748 DZIP1Q86YF9 867 aaKnown RBP17.34■□□□□ 0.37
PDE6D-204ENST00000477748 SIRT2Q8IXJ6 389 aa17.34■□□□□ 0.37
PDE6D-204ENST00000477748 RPAP1Q9BWH6 1393 aaPredicted RBP17.34■□□□□ 0.37
PDE6D-204ENST00000477748 CCDC8Q9H0W5 538 aaPredicted RBP17.34■□□□□ 0.37
PDE6D-204ENST00000477748 DAGLAQ9Y4D2 1042 aa17.34■□□□□ 0.37
PDE6D-204ENST00000477748 LAMB1P07942 1786 aa17.33■□□□□ 0.37
PDE6D-204ENST00000477748 MCAMP43121 646 aa17.33■□□□□ 0.36
PDE6D-204ENST00000477748 OTUD7BQ6GQQ9 843 aa17.33■□□□□ 0.36
PDE6D-204ENST00000477748 EAF2Q96CJ1 260 aaPredicted RBP17.33■□□□□ 0.36
PDE6D-204ENST00000477748 APBB1O00213 710 aa17.32■□□□□ 0.36
PDE6D-204ENST00000477748 FKTNO75072 461 aa17.32■□□□□ 0.36
PDE6D-204ENST00000477748 RRP1P56182 461 aaKnown RBP17.32■□□□□ 0.36
PDE6D-204ENST00000477748 TBC1D9Q6ZT07 1266 aa17.32■□□□□ 0.36
PDE6D-204ENST00000477748 CDAN1Q8IWY9 1227 aa17.32■□□□□ 0.36
PDE6D-204ENST00000477748 SLF2Q8IX21 1173 aa17.32■□□□□ 0.36
PDE6D-204ENST00000477748 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.32■□□□□ 0.36
PDE6D-204ENST00000477748 RHPN1Q8TCX5 695 aa17.32■□□□□ 0.36
PDE6D-204ENST00000477748 ELP3Q9H9T3 547 aa17.32■□□□□ 0.36
PDE6D-204ENST00000477748 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.32■□□□□ 0.36
PDE6D-204ENST00000477748 DBNLQ9UJU6 430 aaKnown RBP17.32■□□□□ 0.36
PDE6D-204ENST00000477748 CSADQ9Y600 493 aa17.32■□□□□ 0.36
PDE6D-204ENST00000477748 TESPA1A2RU30 521 aaPredicted RBP17.31■□□□□ 0.36
PDE6D-204ENST00000477748 IGF2BP3O00425 579 aaKnown RBP eCLIP17.31■□□□□ 0.36
PDE6D-204ENST00000477748 GJA5P36382 358 aa17.31■□□□□ 0.36
PDE6D-204ENST00000477748 MAP3K9P80192 1104 aa17.31■□□□□ 0.36
PDE6D-204ENST00000477748 VGLL4Q14135 290 aa17.31■□□□□ 0.36
PDE6D-204ENST00000477748 CDC42EP5Q6NZY7 148 aa17.31■□□□□ 0.36
PDE6D-204ENST00000477748 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.31■□□□□ 0.36
PDE6D-204ENST00000477748 AACSQ86V21 672 aa17.31■□□□□ 0.36
PDE6D-204ENST00000477748 OPTNQ96CV9 577 aa17.31■□□□□ 0.36
PDE6D-204ENST00000477748 IL1RAPL2Q9NP60 686 aa17.31■□□□□ 0.36
PDE6D-204ENST00000477748 SNRKQ9NRH2 765 aa17.31■□□□□ 0.36
PDE6D-204ENST00000477748 USP40Q9NVE5 1235 aa17.31■□□□□ 0.36
PDE6D-204ENST00000477748 TLR7Q9NYK1 1049 aaKnown RBP17.31■□□□□ 0.36
PDE6D-204ENST00000477748 OTOFQ9HC10 1997 aa17.31■□□□□ 0.36
PDE6D-204ENST00000477748 AK9Q5TCS8 1911 aa17.31■□□□□ 0.36
PDE6D-204ENST00000477748 MECOMQ03112 1051 aa17.3■□□□□ 0.36
PDE6D-204ENST00000477748 DCAF15Q66K64 600 aa17.3■□□□□ 0.36
PDE6D-204ENST00000477748 KIF1BPQ96EK5 621 aa17.3■□□□□ 0.36
PDE6D-204ENST00000477748 RAI14Q9P0K7 980 aa17.3■□□□□ 0.36
PDE6D-204ENST00000477748 HTTP42858 3142 aa17.3■□□□□ 0.36
PDE6D-204ENST00000477748 GAKO14976 1311 aa17.29■□□□□ 0.36
PDE6D-204ENST00000477748 RAB11FIP3O75154 756 aa17.29■□□□□ 0.36
PDE6D-204ENST00000477748 CLASRPQ8N2M8 674 aaKnown RBP17.29■□□□□ 0.36
PDE6D-204ENST00000477748 FAM163AQ96GL9 167 aaPredicted RBP17.29■□□□□ 0.36
PDE6D-204ENST00000477748 ZNF512BQ96KM6 892 aaPredicted RBP17.29■□□□□ 0.36
PDE6D-204ENST00000477748 BCL11AQ9H165 835 aa17.29■□□□□ 0.36
PDE6D-204ENST00000477748 R3HDMLQ9H3Y0 253 aa17.29■□□□□ 0.36
PDE6D-204ENST00000477748 LRP2BPQ9P2M1 347 aa17.29■□□□□ 0.36
PDE6D-204ENST00000477748 HPS5Q9UPZ3 1129 aa17.29■□□□□ 0.36
PDE6D-204ENST00000477748 LDHCP07864 332 aa17.28■□□□□ 0.36
PDE6D-204ENST00000477748 GTF2A2P52657 109 aa17.28■□□□□ 0.36
PDE6D-204ENST00000477748 GSTO1P78417 241 aa17.28■□□□□ 0.36
PDE6D-204ENST00000477748 TCP10Q12799 353 aa17.28■□□□□ 0.36
PDE6D-204ENST00000477748 FBXO46Q6PJ61 603 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms