RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 ZBTB48P10074 688 aaPredicted RBP26.79■■□□□ 1.88
COL9A3-211ENST00000477612 GORABQ5T7V8 394 aa26.79■■□□□ 1.88
COL9A3-211ENST00000477612 CDC42EP5Q6NZY7 148 aa26.79■■□□□ 1.88
COL9A3-211ENST00000477612 SPATA5Q8NB90 893 aa26.79■■□□□ 1.88
COL9A3-211ENST00000477612 CLMNQ96JQ2 1002 aa26.79■■□□□ 1.88
COL9A3-211ENST00000477612 ZBTB40Q9NUA8 1239 aa26.79■■□□□ 1.88
COL9A3-211ENST00000477612 UQCRFS1P1P0C7P4 283 aa26.78■■□□□ 1.88
COL9A3-211ENST00000477612 OS9Q13438 667 aaPredicted RBP26.78■■□□□ 1.88
COL9A3-211ENST00000477612 FAM151AQ8WW52 585 aa26.78■■□□□ 1.88
COL9A3-211ENST00000477612 ABCF2Q9UG63 623 aa26.78■■□□□ 1.88
COL9A3-211ENST00000477612 COG6Q9Y2V7 657 aa26.78■■□□□ 1.88
COL9A3-211ENST00000477612 MCAMP43121 646 aa26.77■■□□□ 1.88
COL9A3-211ENST00000477612 SREBF2Q12772 1141 aa26.77■■□□□ 1.88
COL9A3-211ENST00000477612 PDE3AQ14432 1141 aa26.77■■□□□ 1.88
COL9A3-211ENST00000477612 SLF2Q8IX21 1173 aa26.77■■□□□ 1.88
COL9A3-211ENST00000477612 RPAP2Q8IXW5 612 aaPredicted RBP26.77■■□□□ 1.88
COL9A3-211ENST00000477612 WNK4Q96J92 1243 aa26.77■■□□□ 1.88
COL9A3-211ENST00000477612 ZNF512BQ96KM6 892 aaPredicted RBP26.77■■□□□ 1.88
COL9A3-211ENST00000477612 INHBEP58166 350 aa26.76■■□□□ 1.87
COL9A3-211ENST00000477612 ERICH6Q7L0X2 663 aa26.76■■□□□ 1.87
COL9A3-211ENST00000477612 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.76■■□□□ 1.87
COL9A3-211ENST00000477612 HOOK2Q96ED9 719 aa26.76■■□□□ 1.87
COL9A3-211ENST00000477612 CHMP4BQ9H444 224 aaKnown RBP26.76■■□□□ 1.87
COL9A3-211ENST00000477612 MYO5AQ9Y4I1 1855 aaKnown RBP26.75■■□□□ 1.87
COL9A3-211ENST00000477612 MANSC4A6NHS7 340 aaPredicted RBP26.75■■□□□ 1.87
COL9A3-211ENST00000477612 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.75■■□□□ 1.87
COL9A3-211ENST00000477612 DZIP1Q86YF9 867 aaKnown RBP26.75■■□□□ 1.87
COL9A3-211ENST00000477612 DBNDD2Q9BQY9 259 aa26.75■■□□□ 1.87
COL9A3-211ENST00000477612 USP40Q9NVE5 1235 aa26.75■■□□□ 1.87
COL9A3-211ENST00000477612 MAP3K9P80192 1104 aa26.74■■□□□ 1.87
COL9A3-211ENST00000477612 MKRN3Q13064 507 aaKnown RBP26.74■■□□□ 1.87
COL9A3-211ENST00000477612 CCDC158Q5M9N0 1113 aa26.74■■□□□ 1.87
COL9A3-211ENST00000477612 PI16Q6UXB8 463 aa26.74■■□□□ 1.87
COL9A3-211ENST00000477612 ZNF384Q8TF68 577 aa26.74■■□□□ 1.87
COL9A3-211ENST00000477612 CFHR5Q9BXR6 569 aa26.74■■□□□ 1.87
COL9A3-211ENST00000477612 IDI2Q9BXS1 227 aa26.74■■□□□ 1.87
COL9A3-211ENST00000477612 FAM198AQ9UFP1 575 aa26.74■■□□□ 1.87
COL9A3-211ENST00000477612 MECOMQ03112 1051 aa26.73■■□□□ 1.87
COL9A3-211ENST00000477612 NFIAQ12857 509 aa26.73■■□□□ 1.87
COL9A3-211ENST00000477612 ERC1Q8IUD2 1116 aa26.73■■□□□ 1.87
COL9A3-211ENST00000477612 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.73■■□□□ 1.87
COL9A3-211ENST00000477612 EAF2Q96CJ1 260 aaPredicted RBP26.73■■□□□ 1.87
COL9A3-211ENST00000477612 MROH7-TTC4A0A0A0MT08 1334 aa26.72■■□□□ 1.87
COL9A3-211ENST00000477612 IGSF3O75054 1194 aa26.72■■□□□ 1.87
COL9A3-211ENST00000477612 GJA5P36382 358 aa26.72■■□□□ 1.87
COL9A3-211ENST00000477612 HSP90AB4PQ58FF6 505 aa26.72■■□□□ 1.87
COL9A3-211ENST00000477612 NSUN4Q96CB9 384 aaKnown RBP26.72■■□□□ 1.87
COL9A3-211ENST00000477612 DBNLQ9UJU6 430 aaKnown RBP26.72■■□□□ 1.87
COL9A3-211ENST00000477612 RFX7Q2KHR2 1363 aa26.71■■□□□ 1.87
COL9A3-211ENST00000477612 GPR75-ASB3A0A0A6YYF3 556 aa26.71■■□□□ 1.87
COL9A3-211ENST00000477612 NOM1Q5C9Z4 860 aaKnown RBP26.71■■□□□ 1.87
COL9A3-211ENST00000477612 TTC39AQ5SRH9 613 aa26.71■■□□□ 1.87
COL9A3-211ENST00000477612 TBC1D9Q6ZT07 1266 aa26.71■■□□□ 1.87
COL9A3-211ENST00000477612 SIRT2Q8IXJ6 389 aa26.71■■□□□ 1.87
COL9A3-211ENST00000477612 EXOC6BQ9Y2D4 811 aa26.71■■□□□ 1.87
COL9A3-211ENST00000477612 DOCK2Q92608 1830 aa26.71■■□□□ 1.87
COL9A3-211ENST00000477612 TESPA1A2RU30 521 aaPredicted RBP26.7■■□□□ 1.86
COL9A3-211ENST00000477612 ENTPD3O75355 529 aa26.7■■□□□ 1.86
COL9A3-211ENST00000477612 DCAF15Q66K64 600 aa26.7■■□□□ 1.86
COL9A3-211ENST00000477612 MAST2Q6P0Q8 1798 aa26.7■■□□□ 1.86
COL9A3-211ENST00000477612 MAP4K4O95819 1239 aaPredicted RBP26.69■■□□□ 1.86
COL9A3-211ENST00000477612 ALDH1A1P00352 501 aa26.69■■□□□ 1.86
COL9A3-211ENST00000477612 LDHCP07864 332 aa26.69■■□□□ 1.86
COL9A3-211ENST00000477612 GSTO1P78417 241 aa26.69■■□□□ 1.86
COL9A3-211ENST00000477612 TCP10Q12799 353 aa26.69■■□□□ 1.86
COL9A3-211ENST00000477612 VGLL4Q14135 290 aa26.69■■□□□ 1.86
COL9A3-211ENST00000477612 C20orf194Q5TEA3 1177 aa26.69■■□□□ 1.86
COL9A3-211ENST00000477612 OPTNQ96CV9 577 aa26.69■■□□□ 1.86
COL9A3-211ENST00000477612 ELP3Q9H9T3 547 aa26.69■■□□□ 1.86
COL9A3-211ENST00000477612 HMMRO75330 724 aa26.68■■□□□ 1.86
COL9A3-211ENST00000477612 NPM3O75607 178 aaKnown RBP26.68■■□□□ 1.86
COL9A3-211ENST00000477612 BTDP43251 543 aa26.68■■□□□ 1.86
COL9A3-211ENST00000477612 RHBDL3P58872 404 aa26.68■■□□□ 1.86
COL9A3-211ENST00000477612 ZNF341Q9BYN7 854 aa26.68■■□□□ 1.86
COL9A3-211ENST00000477612 CCDC8Q9H0W5 538 aaPredicted RBP26.68■■□□□ 1.86
COL9A3-211ENST00000477612 ZNF112Q9UJU3 913 aa26.68■■□□□ 1.86
COL9A3-211ENST00000477612 CSADQ9Y600 493 aa26.68■■□□□ 1.86
COL9A3-211ENST00000477612 WDHD1O75717 1129 aaPredicted RBP26.67■■□□□ 1.86
COL9A3-211ENST00000477612 IFNL1Q8IU54 200 aa26.67■■□□□ 1.86
COL9A3-211ENST00000477612 TLR7Q9NYK1 1049 aaKnown RBP26.67■■□□□ 1.86
COL9A3-211ENST00000477612 TBC1D8O95759 1140 aa26.66■■□□□ 1.86
COL9A3-211ENST00000477612 CYP2E1P05181 493 aaPredicted RBP26.66■■□□□ 1.86
COL9A3-211ENST00000477612 RGS3P49796 1198 aa26.66■■□□□ 1.86
COL9A3-211ENST00000477612 ZFPM1Q8IX07 1006 aa26.66■■□□□ 1.86
COL9A3-211ENST00000477612 RHPN1Q8TCX5 695 aa26.66■■□□□ 1.86
COL9A3-211ENST00000477612 MS4A4AQ96JQ5 239 aa26.66■■□□□ 1.86
COL9A3-211ENST00000477612 WRNIP1Q96S55 665 aa26.66■■□□□ 1.86
COL9A3-211ENST00000477612 RAI14Q9P0K7 980 aa26.66■■□□□ 1.86
COL9A3-211ENST00000477612 LRP2BPQ9P2M1 347 aa26.66■■□□□ 1.86
COL9A3-211ENST00000477612 SNCAIPQ9Y6H5 919 aa26.66■■□□□ 1.86
COL9A3-211ENST00000477612 SPDYE5A6NIY4 337 aa26.65■■□□□ 1.86
COL9A3-211ENST00000477612 MAP3K10Q02779 954 aa26.65■■□□□ 1.86
COL9A3-211ENST00000477612 MIGA2Q7L4E1 593 aa26.65■■□□□ 1.86
COL9A3-211ENST00000477612 SNRKQ9NRH2 765 aa26.65■■□□□ 1.86
COL9A3-211ENST00000477612 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.65■■□□□ 1.86
COL9A3-211ENST00000477612 ATRNL1Q5VV63 1379 aa26.65■■□□□ 1.86
COL9A3-211ENST00000477612 CDK5RAP2Q96SN8 1893 aa26.65■■□□□ 1.86
COL9A3-211ENST00000477612 IGF2BP3O00425 579 aaKnown RBP eCLIP26.64■■□□□ 1.86
COL9A3-211ENST00000477612 CNKSR2Q8WXI2 1034 aa26.64■■□□□ 1.86
COL9A3-211ENST00000477612 KIF1BPQ96EK5 621 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms