RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 CERS3Q8IU89 383 aa16.03■□□□□ 0.16
HLA-DPA1-246ENST00000476642 APOBEC3FQ8IUX4 373 aaKnown RBP16.03■□□□□ 0.16
HLA-DPA1-246ENST00000476642 SULF1Q8IWU6 871 aa16.03■□□□□ 0.16
HLA-DPA1-246ENST00000476642 FAM163AQ96GL9 167 aaPredicted RBP16.03■□□□□ 0.16
HLA-DPA1-246ENST00000476642 ZBED3Q96IU2 234 aaPredicted RBP16.03■□□□□ 0.16
HLA-DPA1-246ENST00000476642 DNAJC2Q99543 621 aaKnown RBP16.03■□□□□ 0.16
HLA-DPA1-246ENST00000476642 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.03■□□□□ 0.16
HLA-DPA1-246ENST00000476642 PAG1Q9NWQ8 432 aa16.03■□□□□ 0.16
HLA-DPA1-246ENST00000476642 STAP2Q9UGK3 403 aa16.03■□□□□ 0.16
HLA-DPA1-246ENST00000476642 AOC2O75106 756 aa16.02■□□□□ 0.16
HLA-DPA1-246ENST00000476642 IDH1O75874 414 aaKnown RBP16.02■□□□□ 0.16
HLA-DPA1-246ENST00000476642 MAP4K4O95819 1239 aaPredicted RBP16.02■□□□□ 0.16
HLA-DPA1-246ENST00000476642 EGFRP00533 1210 aa16.02■□□□□ 0.16
HLA-DPA1-246ENST00000476642 MECOMQ03112 1051 aa16.02■□□□□ 0.16
HLA-DPA1-246ENST00000476642 TNFAIP1Q13829 316 aa16.02■□□□□ 0.16
HLA-DPA1-246ENST00000476642 GRIK5Q16478 980 aa16.02■□□□□ 0.16
HLA-DPA1-246ENST00000476642 NBPF9Q3BBW0 867 aa16.02■□□□□ 0.16
HLA-DPA1-246ENST00000476642 NAA16Q6N069 864 aaPredicted RBP16.02■□□□□ 0.16
HLA-DPA1-246ENST00000476642 ZSCAN25Q6NSZ9 544 aa16.02■□□□□ 0.16
HLA-DPA1-246ENST00000476642 TBC1D9Q6ZT07 1266 aa16.02■□□□□ 0.16
HLA-DPA1-246ENST00000476642 USP48Q86UV5 1035 aa16.02■□□□□ 0.16
HLA-DPA1-246ENST00000476642 GGA3Q9NZ52 723 aa16.02■□□□□ 0.16
HLA-DPA1-246ENST00000476642 GOLIM4O00461 696 aa16.01■□□□□ 0.15
HLA-DPA1-246ENST00000476642 BAG3O95817 575 aa16.01■□□□□ 0.15
HLA-DPA1-246ENST00000476642 TNNI2P48788 182 aa16.01■□□□□ 0.15
HLA-DPA1-246ENST00000476642 PDE1AP54750 535 aa16.01■□□□□ 0.15
HLA-DPA1-246ENST00000476642 ANGEL2Q5VTE6 544 aaKnown RBP16.01■□□□□ 0.15
HLA-DPA1-246ENST00000476642 NSUN4Q96CB9 384 aaKnown RBP16.01■□□□□ 0.15
HLA-DPA1-246ENST00000476642 HHIPL1Q96JK4 782 aa16.01■□□□□ 0.15
HLA-DPA1-246ENST00000476642 PRMT6Q96LA8 375 aaPredicted RBP16.01■□□□□ 0.15
HLA-DPA1-246ENST00000476642 POLR2AP24928 1970 aaKnown RBP16■□□□□ 0.15
HLA-DPA1-246ENST00000476642 MROH7-TTC4A0A0A0MT08 1334 aa16■□□□□ 0.15
HLA-DPA1-246ENST00000476642 GAKO14976 1311 aa16■□□□□ 0.15
HLA-DPA1-246ENST00000476642 SALL3Q9BXA9 1300 aa16■□□□□ 0.15
HLA-DPA1-246ENST00000476642 MYH7P12883 1935 aa16■□□□□ 0.15
HLA-DPA1-246ENST00000476642 TRPM7Q96QT4 1865 aa16■□□□□ 0.15
HLA-DPA1-246ENST00000476642 MYO5AQ9Y4I1 1855 aaKnown RBP16■□□□□ 0.15
HLA-DPA1-246ENST00000476642 PLCG2P16885 1265 aa16■□□□□ 0.15
HLA-DPA1-246ENST00000476642 FKBP1CQ5VVH2 108 aa16■□□□□ 0.15
HLA-DPA1-246ENST00000476642 OSBPL3Q9H4L5 887 aa16■□□□□ 0.15
HLA-DPA1-246ENST00000476642 PPP4R2Q9NY27 417 aa16■□□□□ 0.15
HLA-DPA1-246ENST00000476642 DAGLAQ9Y4D2 1042 aa16■□□□□ 0.15
HLA-DPA1-246ENST00000476642 PPP2R3BQ9Y5P8 575 aa16■□□□□ 0.15
HLA-DPA1-246ENST00000476642 CA12O43570 354 aa15.99■□□□□ 0.15
HLA-DPA1-246ENST00000476642 DIXDC1Q155Q3 683 aa15.99■□□□□ 0.15
HLA-DPA1-246ENST00000476642 SPDYE2Q495Y8 402 aa15.99■□□□□ 0.15
HLA-DPA1-246ENST00000476642 KRT26Q7Z3Y9 468 aa15.99■□□□□ 0.15
HLA-DPA1-246ENST00000476642 TICAM2Q86XR7 235 aa15.99■□□□□ 0.15
HLA-DPA1-246ENST00000476642 PI4K2BQ8TCG2 481 aa15.99■□□□□ 0.15
HLA-DPA1-246ENST00000476642 ABHD8Q96I13 439 aa15.99■□□□□ 0.15
HLA-DPA1-246ENST00000476642 PIH1D3Q9NQM4 214 aaKnown RBP15.99■□□□□ 0.15
HLA-DPA1-246ENST00000476642 GPR75-ASB3A0A0A6YYF3 556 aa15.98■□□□□ 0.15
HLA-DPA1-246ENST00000476642 HUNKP57058 714 aa15.98■□□□□ 0.15
HLA-DPA1-246ENST00000476642 APOBEC3HQ6NTF7 200 aaKnown RBP15.98■□□□□ 0.15
HLA-DPA1-246ENST00000476642 ANTXR1Q9H6X2 564 aa15.98■□□□□ 0.15
HLA-DPA1-246ENST00000476642 TDRD3Q9H7E2 651 aaKnown RBP15.98■□□□□ 0.15
HLA-DPA1-246ENST00000476642 VEZTQ9HBM0 779 aa15.98■□□□□ 0.15
HLA-DPA1-246ENST00000476642 ZNF70Q9UC06 446 aaPredicted RBP15.98■□□□□ 0.15
HLA-DPA1-246ENST00000476642 ZFYP08048 801 aaPredicted RBP15.97■□□□□ 0.15
HLA-DPA1-246ENST00000476642 NF2P35240 595 aa15.97■□□□□ 0.15
HLA-DPA1-246ENST00000476642 NOGQ13253 232 aa15.97■□□□□ 0.15
HLA-DPA1-246ENST00000476642 SLC9C2Q5TAH2 1124 aa15.97■□□□□ 0.15
HLA-DPA1-246ENST00000476642 MAGEB6Q8N7X4 407 aa15.97■□□□□ 0.15
HLA-DPA1-246ENST00000476642 C2orf69Q8N8R5 385 aa15.97■□□□□ 0.15
HLA-DPA1-246ENST00000476642 KBTBD3Q8NAB2 608 aa15.97■□□□□ 0.15
HLA-DPA1-246ENST00000476642 OTUD7AQ8TE49 926 aaPredicted RBP15.97■□□□□ 0.15
HLA-DPA1-246ENST00000476642 TSKSQ9UJT2 592 aa15.97■□□□□ 0.15
HLA-DPA1-246ENST00000476642 NDUFB9Q9Y6M9 179 aa15.97■□□□□ 0.15
HLA-DPA1-246ENST00000476642 CLRN2A0PK11 232 aa15.96■□□□□ 0.15
HLA-DPA1-246ENST00000476642 CYP7A1P22680 504 aa15.96■□□□□ 0.15
HLA-DPA1-246ENST00000476642 BTDP43251 543 aa15.96■□□□□ 0.15
HLA-DPA1-246ENST00000476642 TSHZ3Q63HK5 1081 aa15.96■□□□□ 0.15
HLA-DPA1-246ENST00000476642 FAM83AQ86UY5 434 aa15.96■□□□□ 0.15
HLA-DPA1-246ENST00000476642 PLEKHM2Q8IWE5 1019 aa15.96■□□□□ 0.15
HLA-DPA1-246ENST00000476642 EVI5LQ96CN4 794 aa15.96■□□□□ 0.15
HLA-DPA1-246ENST00000476642 HOOK2Q96ED9 719 aa15.96■□□□□ 0.15
HLA-DPA1-246ENST00000476642 GBA2Q9HCG7 927 aaPredicted RBP15.96■□□□□ 0.15
HLA-DPA1-246ENST00000476642 USP40Q9NVE5 1235 aa15.96■□□□□ 0.15
HLA-DPA1-246ENST00000476642 CCDC85CA6NKD9 419 aa15.95■□□□□ 0.14
HLA-DPA1-246ENST00000476642 PPP4CP60510 307 aa15.95■□□□□ 0.14
HLA-DPA1-246ENST00000476642 UBE3CQ15386 1083 aa15.95■□□□□ 0.14
HLA-DPA1-246ENST00000476642 CDC42EP5Q6NZY7 148 aa15.95■□□□□ 0.14
HLA-DPA1-246ENST00000476642 DEFB129Q9H1M3 183 aa15.95■□□□□ 0.14
HLA-DPA1-246ENST00000476642 PCDHAC2Q9Y5I4 1007 aa15.95■□□□□ 0.14
HLA-DPA1-246ENST00000476642 ASTN2O75129 1339 aaPredicted RBP15.94■□□□□ 0.14
HLA-DPA1-246ENST00000476642 THSD7BQ9C0I4 1608 aa15.94■□□□□ 0.14
HLA-DPA1-246ENST00000476642 AK9Q5TCS8 1911 aa15.94■□□□□ 0.14
HLA-DPA1-246ENST00000476642 ADM5C9JUS6 153 aa15.94■□□□□ 0.14
HLA-DPA1-246ENST00000476642 NPM3O75607 178 aaKnown RBP15.94■□□□□ 0.14
HLA-DPA1-246ENST00000476642 PDE6AP16499 860 aa15.94■□□□□ 0.14
HLA-DPA1-246ENST00000476642 ADD2P35612 726 aa15.94■□□□□ 0.14
HLA-DPA1-246ENST00000476642 SUPT20HL1Q3ZLR7 823 aa15.94■□□□□ 0.14
HLA-DPA1-246ENST00000476642 RGMBQ6NW40 437 aa15.94■□□□□ 0.14
HLA-DPA1-246ENST00000476642 ZNF384Q8TF68 577 aa15.94■□□□□ 0.14
HLA-DPA1-246ENST00000476642 EDC3Q96F86 508 aaKnown RBP15.94■□□□□ 0.14
HLA-DPA1-246ENST00000476642 FSD1Q9BTV5 496 aa15.94■□□□□ 0.14
HLA-DPA1-246ENST00000476642 ZNF532Q9HCE3 1301 aa15.94■□□□□ 0.14
HLA-DPA1-246ENST00000476642 ENTPD3O75355 529 aa15.93■□□□□ 0.14
HLA-DPA1-246ENST00000476642 RASA3Q14644 834 aa15.93■□□□□ 0.14
HLA-DPA1-246ENST00000476642 DLK2Q6UY11 383 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms