RNA–Protein interactions for RNA: ENST00000476640.1

HMGCS2-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 3

Gene HMGCS2, Length 857 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-203ENST00000476640 ZGPATQ8N5A5 531 aaKnown RBP16.62■□□□□ 0.25
HMGCS2-203ENST00000476640 PTPN18Q99952 460 aa16.62■□□□□ 0.25
HMGCS2-203ENST00000476640 IPO8O15397 1037 aaKnown RBP16.61■□□□□ 0.25
HMGCS2-203ENST00000476640 RARSP54136 660 aaKnown RBP16.61■□□□□ 0.25
HMGCS2-203ENST00000476640 FAM151AQ8WW52 585 aa16.61■□□□□ 0.25
HMGCS2-203ENST00000476640 BRI3BPQ8WY22 251 aa16.61■□□□□ 0.25
HMGCS2-203ENST00000476640 ZNF341Q9BYN7 854 aa16.61■□□□□ 0.25
HMGCS2-203ENST00000476640 EFCC1Q9HA90 598 aa16.61■□□□□ 0.25
HMGCS2-203ENST00000476640 ZCCHC17Q9NP64 241 aaKnown RBP16.61■□□□□ 0.25
HMGCS2-203ENST00000476640 COPRSQ9NQ92 184 aa16.61■□□□□ 0.25
HMGCS2-203ENST00000476640 SALL1Q9NSC2 1324 aa16.61■□□□□ 0.25
HMGCS2-203ENST00000476640 ZBTB22O15209 634 aa16.6■□□□□ 0.25
HMGCS2-203ENST00000476640 SNAPC2Q13487 334 aa16.6■□□□□ 0.25
HMGCS2-203ENST00000476640 CD99L2Q8TCZ2 262 aa16.6■□□□□ 0.25
HMGCS2-203ENST00000476640 PTPN22Q9Y2R2 807 aa16.6■□□□□ 0.25
HMGCS2-203ENST00000476640 DAGLAQ9Y4D2 1042 aa16.6■□□□□ 0.25
HMGCS2-203ENST00000476640 KIAA0100Q14667 2235 aaKnown RBP16.6■□□□□ 0.25
HMGCS2-203ENST00000476640 PPIL2Q13356 520 aa16.59■□□□□ 0.25
HMGCS2-203ENST00000476640 SLF2Q8IX21 1173 aa16.59■□□□□ 0.25
HMGCS2-203ENST00000476640 CNKSR2Q8WXI2 1034 aa16.59■□□□□ 0.25
HMGCS2-203ENST00000476640 MEIS3Q99687 375 aa16.59■□□□□ 0.25
HMGCS2-203ENST00000476640 AKAP2Q9Y2D5 859 aa16.59■□□□□ 0.25
HMGCS2-203ENST00000476640 SNCAIPQ9Y6H5 919 aa16.59■□□□□ 0.25
HMGCS2-203ENST00000476640 PRDX5P30044 214 aa16.58■□□□□ 0.24
HMGCS2-203ENST00000476640 PPATQ06203 517 aa16.58■□□□□ 0.24
HMGCS2-203ENST00000476640 DIXDC1Q155Q3 683 aa16.58■□□□□ 0.24
HMGCS2-203ENST00000476640 SPTY2D1Q68D10 685 aaPredicted RBP16.58■□□□□ 0.24
HMGCS2-203ENST00000476640 CDC42EP5Q6NZY7 148 aa16.58■□□□□ 0.24
HMGCS2-203ENST00000476640 ZKSCAN4Q969J2 545 aaPredicted RBP16.58■□□□□ 0.24
HMGCS2-203ENST00000476640 PA2G4Q9UQ80 394 aaKnown RBP16.58■□□□□ 0.24
HMGCS2-203ENST00000476640 PDS5AQ29RF7 1337 aaKnown RBP16.58■□□□□ 0.24
HMGCS2-203ENST00000476640 SRGAP3O43295 1099 aa16.57■□□□□ 0.24
HMGCS2-203ENST00000476640 PHKA1P46020 1223 aa16.57■□□□□ 0.24
HMGCS2-203ENST00000476640 KIF22Q14807 665 aa16.57■□□□□ 0.24
HMGCS2-203ENST00000476640 PRPF38BQ5VTL8 546 aaKnown RBP16.57■□□□□ 0.24
HMGCS2-203ENST00000476640 CCDC102BQ68D86 513 aa16.57■□□□□ 0.24
HMGCS2-203ENST00000476640 USP40Q9NVE5 1235 aa16.57■□□□□ 0.24
HMGCS2-203ENST00000476640 SLC34A2O95436 690 aa16.56■□□□□ 0.24
HMGCS2-203ENST00000476640 TCP10Q12799 353 aa16.56■□□□□ 0.24
HMGCS2-203ENST00000476640 MTX1Q13505 466 aa16.56■□□□□ 0.24
HMGCS2-203ENST00000476640 MVPQ14764 893 aaKnown RBP16.56■□□□□ 0.24
HMGCS2-203ENST00000476640 MIGA2Q7L4E1 593 aa16.56■□□□□ 0.24
HMGCS2-203ENST00000476640 DZIP1Q86YF9 867 aaKnown RBP16.56■□□□□ 0.24
HMGCS2-203ENST00000476640 FAM43AQ8N2R8 423 aa16.56■□□□□ 0.24
HMGCS2-203ENST00000476640 IRF6O14896 467 aa16.55■□□□□ 0.24
HMGCS2-203ENST00000476640 TLR2O60603 784 aa16.55■□□□□ 0.24
HMGCS2-203ENST00000476640 NBPF11Q86T75 865 aa16.55■□□□□ 0.24
HMGCS2-203ENST00000476640 ZNF112Q9UJU3 913 aa16.55■□□□□ 0.24
HMGCS2-203ENST00000476640 A0A1B0GUL7 405 aa16.54■□□□□ 0.24
HMGCS2-203ENST00000476640 BTBD19C9JJ37 291 aa16.54■□□□□ 0.24
HMGCS2-203ENST00000476640 GNRH1P01148 92 aa16.54■□□□□ 0.24
HMGCS2-203ENST00000476640 INPP5BP32019 993 aa16.54■□□□□ 0.24
HMGCS2-203ENST00000476640 ARMC5Q96C12 935 aa16.54■□□□□ 0.24
HMGCS2-203ENST00000476640 ABCF2Q9UG63 623 aa16.54■□□□□ 0.24
HMGCS2-203ENST00000476640 DOCK1Q14185 1865 aa16.54■□□□□ 0.24
HMGCS2-203ENST00000476640 ENTPD3O75355 529 aa16.53■□□□□ 0.24
HMGCS2-203ENST00000476640 GNAI2P04899 355 aa16.53■□□□□ 0.24
HMGCS2-203ENST00000476640 ADORA1P30542 326 aa16.53■□□□□ 0.24
HMGCS2-203ENST00000476640 TIMM10P62072 90 aa16.53■□□□□ 0.24
HMGCS2-203ENST00000476640 NFIAQ12857 509 aa16.53■□□□□ 0.24
HMGCS2-203ENST00000476640 RASGRF1Q13972 1273 aa16.53■□□□□ 0.24
HMGCS2-203ENST00000476640 SLC9C1Q4G0N8 1177 aa16.53■□□□□ 0.24
HMGCS2-203ENST00000476640 NOL9Q5SY16 702 aaKnown RBP16.53■□□□□ 0.24
HMGCS2-203ENST00000476640 GORABQ5T7V8 394 aa16.53■□□□□ 0.24
HMGCS2-203ENST00000476640 ATF7IPQ6VMQ6 1270 aa16.53■□□□□ 0.24
HMGCS2-203ENST00000476640 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.53■□□□□ 0.24
HMGCS2-203ENST00000476640 FRAT1Q92837 279 aaPredicted RBP16.53■□□□□ 0.24
HMGCS2-203ENST00000476640 TMEM106CQ9BVX2 250 aa16.53■□□□□ 0.24
HMGCS2-203ENST00000476640 IDI2Q9BXS1 227 aa16.53■□□□□ 0.24
HMGCS2-203ENST00000476640 FAM198AQ9UFP1 575 aa16.53■□□□□ 0.24
HMGCS2-203ENST00000476640 HTTP42858 3142 aa16.53■□□□□ 0.24
HMGCS2-203ENST00000476640 MGAMO43451 1857 aa16.52■□□□□ 0.24
HMGCS2-203ENST00000476640 GAKO14976 1311 aa16.52■□□□□ 0.24
HMGCS2-203ENST00000476640 TRIM27P14373 513 aa16.52■□□□□ 0.24
HMGCS2-203ENST00000476640 PRMT2P55345 433 aa16.52■□□□□ 0.24
HMGCS2-203ENST00000476640 TFCP2Q12800 502 aa16.52■□□□□ 0.24
HMGCS2-203ENST00000476640 ANKRD23Q86SG2 305 aa16.52■□□□□ 0.24
HMGCS2-203ENST00000476640 ZSCAN29Q8IWY8 852 aaPredicted RBP16.52■□□□□ 0.24
HMGCS2-203ENST00000476640 FAM163AQ96GL9 167 aaPredicted RBP16.52■□□□□ 0.24
HMGCS2-203ENST00000476640 XAGE2Q96GT9 111 aa16.52■□□□□ 0.24
HMGCS2-203ENST00000476640 NEUROD6Q96NK8 337 aa16.52■□□□□ 0.24
HMGCS2-203ENST00000476640 KCNH4Q9UQ05 1017 aa16.52■□□□□ 0.24
HMGCS2-203ENST00000476640 PTPRFP10586 1907 aa16.52■□□□□ 0.23
HMGCS2-203ENST00000476640 RGS3P49796 1198 aa16.51■□□□□ 0.23
HMGCS2-203ENST00000476640 GSTO1P78417 241 aa16.51■□□□□ 0.23
HMGCS2-203ENST00000476640 LACTBP83111 547 aaPredicted RBP16.51■□□□□ 0.23
HMGCS2-203ENST00000476640 G3BP1Q13283 466 aaKnown RBP eCLIP16.51■□□□□ 0.23
HMGCS2-203ENST00000476640 ERICH6Q7L0X2 663 aa16.51■□□□□ 0.23
HMGCS2-203ENST00000476640 PICK1Q9NRD5 415 aa16.51■□□□□ 0.23
HMGCS2-203ENST00000476640 ZSWIM8A7E2V4 1837 aa16.51■□□□□ 0.23
HMGCS2-203ENST00000476640 CXCL11O14625 94 aa16.5■□□□□ 0.23
HMGCS2-203ENST00000476640 MAP4K4O95819 1239 aaPredicted RBP16.5■□□□□ 0.23
HMGCS2-203ENST00000476640 LDHCP07864 332 aa16.5■□□□□ 0.23
HMGCS2-203ENST00000476640 PHIPQ8WWQ0 1821 aa16.49■□□□□ 0.23
HMGCS2-203ENST00000476640 ATAD5Q96QE3 1844 aa16.49■□□□□ 0.23
HMGCS2-203ENST00000476640 MROH7-TTC4A0A0A0MT08 1334 aa16.49■□□□□ 0.23
HMGCS2-203ENST00000476640 POTEFA5A3E0 1075 aa16.49■□□□□ 0.23
HMGCS2-203ENST00000476640 PDHXO00330 501 aa16.49■□□□□ 0.23
HMGCS2-203ENST00000476640 SCYL3Q8IZE3 742 aa16.49■□□□□ 0.23
HMGCS2-203ENST00000476640 ZNF333Q96JL9 665 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms