RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 H0YGN5 161 aa15.84■□□□□ 0.13
SKA3-206ENST00000475251 PDE8BO95263 885 aa15.84■□□□□ 0.13
SKA3-206ENST00000475251 CACNB3P54284 484 aa15.84■□□□□ 0.13
SKA3-206ENST00000475251 POLA2Q14181 598 aa15.84■□□□□ 0.13
SKA3-206ENST00000475251 HHIPL2Q6UWX4 724 aa15.84■□□□□ 0.13
SKA3-206ENST00000475251 C17orf99Q6UX52 265 aa15.84■□□□□ 0.13
SKA3-206ENST00000475251 ANKRD23Q86SG2 305 aa15.84■□□□□ 0.13
SKA3-206ENST00000475251 KIF16BQ96L93 1317 aa15.84■□□□□ 0.13
SKA3-206ENST00000475251 IFIT1P09914 478 aaKnown RBP15.83■□□□□ 0.12
SKA3-206ENST00000475251 PSMC4P43686 418 aa15.83■□□□□ 0.12
SKA3-206ENST00000475251 GRIK5Q16478 980 aa15.83■□□□□ 0.12
SKA3-206ENST00000475251 RABL6Q3YEC7 729 aaPredicted RBP15.83■□□□□ 0.12
SKA3-206ENST00000475251 CCDC184Q52MB2 194 aa15.83■□□□□ 0.12
SKA3-206ENST00000475251 APOBEC3HQ6NTF7 200 aaKnown RBP15.83■□□□□ 0.12
SKA3-206ENST00000475251 RAET1EQ8TD07 263 aa15.83■□□□□ 0.12
SKA3-206ENST00000475251 DPF3Q92784 378 aa15.83■□□□□ 0.12
SKA3-206ENST00000475251 HTATIP2Q9BUP3 242 aa15.83■□□□□ 0.12
SKA3-206ENST00000475251 SRRDQ9UH36 339 aa15.83■□□□□ 0.12
SKA3-206ENST00000475251 UTYO14607 1347 aa15.83■□□□□ 0.12
SKA3-206ENST00000475251 FMNL1O95466 1100 aaPredicted RBP15.82■□□□□ 0.12
SKA3-206ENST00000475251 NBPF7P0C2Y1 421 aaPredicted RBP15.82■□□□□ 0.12
SKA3-206ENST00000475251 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.82■□□□□ 0.12
SKA3-206ENST00000475251 KAZALD1Q96I82 304 aa15.82■□□□□ 0.12
SKA3-206ENST00000475251 TRIM47Q96LD4 638 aa15.82■□□□□ 0.12
SKA3-206ENST00000475251 BICC1Q9H694 974 aaKnown RBP15.82■□□□□ 0.12
SKA3-206ENST00000475251 MRS2Q9HD23 443 aa15.82■□□□□ 0.12
SKA3-206ENST00000475251 CPA4Q9UI42 421 aa15.82■□□□□ 0.12
SKA3-206ENST00000475251 SALL2Q9Y467 1007 aaPredicted RBP15.82■□□□□ 0.12
SKA3-206ENST00000475251 PDHXO00330 501 aa15.81■□□□□ 0.12
SKA3-206ENST00000475251 GRK4P32298 578 aa15.81■□□□□ 0.12
SKA3-206ENST00000475251 ZEB1P37275 1124 aaPredicted RBP15.81■□□□□ 0.12
SKA3-206ENST00000475251 UBXN2AP68543 259 aa15.81■□□□□ 0.12
SKA3-206ENST00000475251 PUM3Q15397 648 aaKnown RBP15.81■□□□□ 0.12
SKA3-206ENST00000475251 MYPNQ86TC9 1320 aa15.81■□□□□ 0.12
SKA3-206ENST00000475251 VGLL2Q8N8G2 317 aa15.81■□□□□ 0.12
SKA3-206ENST00000475251 WDR66Q8TBY9 1149 aa15.81■□□□□ 0.12
SKA3-206ENST00000475251 FAM151AQ8WW52 585 aa15.81■□□□□ 0.12
SKA3-206ENST00000475251 PARK7Q99497 189 aaKnown RBP15.81■□□□□ 0.12
SKA3-206ENST00000475251 KCNH4Q9UQ05 1017 aa15.81■□□□□ 0.12
SKA3-206ENST00000475251 ZSWIM8A7E2V4 1837 aa15.8■□□□□ 0.12
SKA3-206ENST00000475251 OSBPP22059 807 aa15.8■□□□□ 0.12
SKA3-206ENST00000475251 GJA8P48165 433 aa15.8■□□□□ 0.12
SKA3-206ENST00000475251 BCAMP50895 628 aa15.8■□□□□ 0.12
SKA3-206ENST00000475251 LRRC24Q50LG9 513 aa15.8■□□□□ 0.12
SKA3-206ENST00000475251 CHRDL2Q6WN34 429 aa15.8■□□□□ 0.12
SKA3-206ENST00000475251 MIGA2Q7L4E1 593 aa15.8■□□□□ 0.12
SKA3-206ENST00000475251 GJB1P08034 283 aa15.79■□□□□ 0.12
SKA3-206ENST00000475251 CAPN2P17655 700 aa15.79■□□□□ 0.12
SKA3-206ENST00000475251 INPP5BP32019 993 aa15.79■□□□□ 0.12
SKA3-206ENST00000475251 FCGRTP55899 365 aa15.79■□□□□ 0.12
SKA3-206ENST00000475251 MTFR1Q15390 333 aa15.79■□□□□ 0.12
SKA3-206ENST00000475251 SHISA4Q96DD7 197 aa15.79■□□□□ 0.12
SKA3-206ENST00000475251 BIN2Q9UBW5 565 aaPredicted RBP15.79■□□□□ 0.12
SKA3-206ENST00000475251 ZNF112Q9UJU3 913 aa15.79■□□□□ 0.12
SKA3-206ENST00000475251 NR2E3Q9Y5X4 410 aa15.79■□□□□ 0.12
SKA3-206ENST00000475251 ADGRA2Q96PE1 1338 aa15.78■□□□□ 0.12
SKA3-206ENST00000475251 SLC5A1P13866 664 aa15.78■□□□□ 0.12
SKA3-206ENST00000475251 NOL9Q5SY16 702 aaKnown RBP15.78■□□□□ 0.12
SKA3-206ENST00000475251 SLAIN1Q8ND83 568 aa15.78■□□□□ 0.12
SKA3-206ENST00000475251 RNF208Q9H0X6 261 aa15.78■□□□□ 0.12
SKA3-206ENST00000475251 MYH13Q9UKX3 1938 aa15.77■□□□□ 0.12
SKA3-206ENST00000475251 CXCL11O14625 94 aa15.77■□□□□ 0.12
SKA3-206ENST00000475251 ECM2O94769 699 aaPredicted RBP15.77■□□□□ 0.12
SKA3-206ENST00000475251 CCL5P13501 91 aa15.77■□□□□ 0.12
SKA3-206ENST00000475251 ANKRD44Q8N8A2 993 aa15.77■□□□□ 0.12
SKA3-206ENST00000475251 LPIN2Q92539 896 aa15.77■□□□□ 0.12
SKA3-206ENST00000475251 PTPRCP08575 1304 aa15.76■□□□□ 0.11
SKA3-206ENST00000475251 FGFR2P21802 821 aa15.76■□□□□ 0.11
SKA3-206ENST00000475251 CTGFP29279 349 aa15.76■□□□□ 0.11
SKA3-206ENST00000475251 TCP10Q12799 353 aa15.76■□□□□ 0.11
SKA3-206ENST00000475251 FASTKD5Q7L8L6 764 aaKnown RBP15.76■□□□□ 0.11
SKA3-206ENST00000475251 GNL3LQ9NVN8 582 aaKnown RBP15.76■□□□□ 0.11
SKA3-206ENST00000475251 RBM27Q9P2N5 1060 aaKnown RBP15.76■□□□□ 0.11
SKA3-206ENST00000475251 DAGLAQ9Y4D2 1042 aa15.76■□□□□ 0.11
SKA3-206ENST00000475251 AK9Q5TCS8 1911 aa15.76■□□□□ 0.11
SKA3-206ENST00000475251 ATXN8OSP0DMR3 200 aa15.75■□□□□ 0.11
SKA3-206ENST00000475251 BCRP11274 1271 aa15.75■□□□□ 0.11
SKA3-206ENST00000475251 PRKCZQ05513 592 aa15.75■□□□□ 0.11
SKA3-206ENST00000475251 CDC42EP5Q6NZY7 148 aa15.75■□□□□ 0.11
SKA3-206ENST00000475251 UBE2Q1Q7Z7E8 422 aa15.75■□□□□ 0.11
SKA3-206ENST00000475251 A0A1W2PPC1 479 aa15.74■□□□□ 0.11
SKA3-206ENST00000475251 EYA2O00167 538 aa15.74■□□□□ 0.11
SKA3-206ENST00000475251 FARP2O94887 1054 aaPredicted RBP15.74■□□□□ 0.11
SKA3-206ENST00000475251 LDHBP07195 334 aaKnown RBP15.74■□□□□ 0.11
SKA3-206ENST00000475251 MOGSQ13724 837 aa15.74■□□□□ 0.11
SKA3-206ENST00000475251 KLHDC4Q8TBB5 520 aa15.74■□□□□ 0.11
SKA3-206ENST00000475251 U2AF1L4Q8WU68 220 aaKnown RBP15.74■□□□□ 0.11
SKA3-206ENST00000475251 PICK1Q9NRD5 415 aa15.74■□□□□ 0.11
SKA3-206ENST00000475251 SLC45A1Q9Y2W3 748 aa15.74■□□□□ 0.11
SKA3-206ENST00000475251 ANP32CO43423 234 aa15.73■□□□□ 0.11
SKA3-206ENST00000475251 SCYL3Q8IZE3 742 aa15.73■□□□□ 0.11
SKA3-206ENST00000475251 ZGPATQ8N5A5 531 aaKnown RBP15.73■□□□□ 0.11
SKA3-206ENST00000475251 USP40Q9NVE5 1235 aa15.73■□□□□ 0.11
SKA3-206ENST00000475251 FBXO3Q9UK99 471 aa15.73■□□□□ 0.11
SKA3-206ENST00000475251 SALL1Q9NSC2 1324 aa15.72■□□□□ 0.11
SKA3-206ENST00000475251 MGAMO43451 1857 aa15.72■□□□□ 0.11
SKA3-206ENST00000475251 A0A0G2JLL6 359 aaPredicted RBP15.72■□□□□ 0.11
SKA3-206ENST00000475251 SEMA3EO15041 775 aa15.72■□□□□ 0.11
SKA3-206ENST00000475251 SGPL1O95470 568 aa15.72■□□□□ 0.11
SKA3-206ENST00000475251 CYP2C8P10632 490 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms