RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 RBM17Q96I25 401 aaKnown RBP12.33□□□□□ -0.44
VAPB-204ENST00000475243 FNBP1Q96RU3 617 aa12.33□□□□□ -0.44
VAPB-204ENST00000475243 DCTPP1Q9H773 170 aa12.33□□□□□ -0.44
VAPB-204ENST00000475243 LUC7L2Q9Y383 392 aaKnown RBP12.33□□□□□ -0.44
VAPB-204ENST00000475243 OPA1O60313 960 aa12.33□□□□□ -0.44
VAPB-204ENST00000475243 ANKS4BQ8N8V4 417 aa12.33□□□□□ -0.44
VAPB-204ENST00000475243 RBM28Q9NW13 759 aaKnown RBP12.33□□□□□ -0.44
VAPB-204ENST00000475243 TCP10Q12799 353 aa12.33□□□□□ -0.44
VAPB-204ENST00000475243 NCOA5Q9HCD5 579 aaKnown RBP12.33□□□□□ -0.44
VAPB-204ENST00000475243 POLR2DO15514 142 aaKnown RBP12.33□□□□□ -0.44
VAPB-204ENST00000475243 MYCLP12524 364 aaPredicted RBP12.33□□□□□ -0.44
VAPB-204ENST00000475243 MAP7D1Q3KQU3 841 aa12.33□□□□□ -0.44
VAPB-204ENST00000475243 PICK1Q9NRD5 415 aa12.33□□□□□ -0.44
VAPB-204ENST00000475243 FAM169AQ9Y6X4 670 aa12.33□□□□□ -0.44
VAPB-204ENST00000475243 PIK3AP1Q6ZUJ8 805 aa12.33□□□□□ -0.44
VAPB-204ENST00000475243 USH1GQ495M9 461 aa12.32□□□□□ -0.44
VAPB-204ENST00000475243 C8orf34Q49A92 452 aa12.32□□□□□ -0.44
VAPB-204ENST00000475243 CFAP58Q5T655 872 aa12.32□□□□□ -0.44
VAPB-204ENST00000475243 SLU7O95391 586 aaKnown RBP12.32□□□□□ -0.44
VAPB-204ENST00000475243 LEO1Q8WVC0 666 aaPredicted RBP12.32□□□□□ -0.44
VAPB-204ENST00000475243 SH3BP5O60239 455 aa12.32□□□□□ -0.44
VAPB-204ENST00000475243 DCAF5Q96JK2 942 aa12.32□□□□□ -0.44
VAPB-204ENST00000475243 EYA3Q99504 573 aa12.32□□□□□ -0.44
VAPB-204ENST00000475243 RAPGEF6Q8TEU7 1601 aa12.32□□□□□ -0.44
VAPB-204ENST00000475243 CAPN2P17655 700 aa12.32□□□□□ -0.44
VAPB-204ENST00000475243 CNBD1Q8NA66 436 aa12.32□□□□□ -0.44
VAPB-204ENST00000475243 NOC4LQ9BVI4 516 aaKnown RBP12.32□□□□□ -0.44
VAPB-204ENST00000475243 TBC1D7Q9P0N9 293 aa12.32□□□□□ -0.44
VAPB-204ENST00000475243 EPB41P11171 864 aaKnown RBP12.32□□□□□ -0.44
VAPB-204ENST00000475243 RAD51AP2Q09MP3 1159 aa12.32□□□□□ -0.44
VAPB-204ENST00000475243 MSL1Q68DK7 614 aa12.32□□□□□ -0.44
VAPB-204ENST00000475243 BRAPQ7Z569 592 aa12.32□□□□□ -0.44
VAPB-204ENST00000475243 FLT4P35916 1363 aa12.32□□□□□ -0.44
VAPB-204ENST00000475243 PRDM1O75626 825 aa12.31□□□□□ -0.44
VAPB-204ENST00000475243 PDE4DQ08499 809 aa12.31□□□□□ -0.44
VAPB-204ENST00000475243 CCDC122Q5T0U0 273 aa12.31□□□□□ -0.44
VAPB-204ENST00000475243 PPP1R21Q6ZMI0 780 aa12.31□□□□□ -0.44
VAPB-204ENST00000475243 SOS1Q07889 1333 aaPredicted RBP12.31□□□□□ -0.44
VAPB-204ENST00000475243 TXKP42681 527 aa12.31□□□□□ -0.44
VAPB-204ENST00000475243 CPLX4Q7Z7G2 160 aa12.31□□□□□ -0.44
VAPB-204ENST00000475243 SNX21Q969T3 373 aa12.31□□□□□ -0.44
VAPB-204ENST00000475243 DENND2AQ9ULE3 1009 aa12.31□□□□□ -0.44
VAPB-204ENST00000475243 HOXC9P31274 260 aa12.31□□□□□ -0.44
VAPB-204ENST00000475243 SPATA24Q86W54 205 aa12.31□□□□□ -0.44
VAPB-204ENST00000475243 KIFC2Q96AC6 838 aa12.31□□□□□ -0.44
VAPB-204ENST00000475243 SYCP2Q9BX26 1530 aa12.31□□□□□ -0.44
VAPB-204ENST00000475243 WDR44Q5JSH3 913 aa12.31□□□□□ -0.44
VAPB-204ENST00000475243 HIBADHP31937 336 aaKnown RBP12.31□□□□□ -0.44
VAPB-204ENST00000475243 RNF34Q969K3 372 aa12.31□□□□□ -0.44
VAPB-204ENST00000475243 V9GY48 417 aaPredicted RBP12.31□□□□□ -0.44
VAPB-204ENST00000475243 hCG_1642624A0A1W2PR95 340 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 SMC1BQ8NDV3 1235 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 USP26Q9BXU7 913 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 IGSF3O75054 1194 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 TTC6Q86TZ1 520 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 MSANTD4Q8NCY6 345 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 SMC6Q96SB8 1091 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 BAG1Q99933 345 aaPredicted RBP12.3□□□□□ -0.44
VAPB-204ENST00000475243 STMN4Q9H169 189 aaPredicted RBP12.3□□□□□ -0.44
VAPB-204ENST00000475243 GEN1Q17RS7 908 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 FAM227BQ96M60 508 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 AKR1B15C9JRZ8 316 aaPredicted RBP12.3□□□□□ -0.44
VAPB-204ENST00000475243 RPS6KB1P23443 525 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 RPL13P26373 211 aaKnown RBP12.3□□□□□ -0.44
VAPB-204ENST00000475243 CTDSPL2Q05D32 466 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 PPP2R5DQ14738 602 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 CPXCR1Q8N123 301 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 MICALL1Q8N3F8 863 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 TIGD1Q96MW7 591 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 ZBTB40Q9NUA8 1239 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 PCDH11XQ9BZA7 1347 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 PCDH11YQ9BZA8 1340 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 A1BGP04217 495 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 SNX16P57768 344 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 NBPF14Q5TI25 921 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 PHKBQ93100 1093 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 MYL10Q9BUA6 226 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 ZNF608Q9ULD9 1512 aaPredicted RBP12.3□□□□□ -0.44
VAPB-204ENST00000475243 ELP1O95163 1332 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 FAM160A1Q05DH4 1040 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 OTUD7AQ8TE49 926 aaPredicted RBP12.3□□□□□ -0.44
VAPB-204ENST00000475243 XAGE2Q96GT9 111 aa12.3□□□□□ -0.44
VAPB-204ENST00000475243 URB2Q14146 1524 aaKnown RBP12.3□□□□□ -0.44
VAPB-204ENST00000475243 TBC1D8BQ0IIM8 1120 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 TMOD4Q9NZQ9 345 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 SLC27A2O14975 620 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 PUM3Q15397 648 aaKnown RBP12.29□□□□□ -0.44
VAPB-204ENST00000475243 ZNF790Q6PG37 636 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 HELLSQ9NRZ9 838 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 CCNL1Q9UK58 526 aaPredicted RBP12.29□□□□□ -0.44
VAPB-204ENST00000475243 GPATCH8Q9UKJ3 1502 aaKnown RBP12.29□□□□□ -0.44
VAPB-204ENST00000475243 E7EVH7 732 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 SPOPO43791 374 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 CFAP157Q5JU67 520 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 SEC62Q99442 399 aaKnown RBP12.29□□□□□ -0.44
VAPB-204ENST00000475243 NOD1Q9Y239 953 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.29□□□□□ -0.44
VAPB-204ENST00000475243 STX10O60499 249 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 NCAPH2Q6IBW4 605 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 PPANQ9NQ55 473 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms