RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 RASAL3Q86YV0 1011 aa11.7□□□□□ -0.54
PDPN-204ENST00000475043 TDRD3Q9H7E2 651 aaKnown RBP11.7□□□□□ -0.54
PDPN-204ENST00000475043 COPRSQ9NQ92 184 aa11.7□□□□□ -0.54
PDPN-204ENST00000475043 ANGEL1Q9UNK9 670 aaKnown RBP11.7□□□□□ -0.54
PDPN-204ENST00000475043 FZD1Q9UP38 647 aa11.7□□□□□ -0.54
PDPN-204ENST00000475043 PPP2R3BQ9Y5P8 575 aa11.7□□□□□ -0.54
PDPN-204ENST00000475043 TNFAIP1Q13829 316 aa11.69□□□□□ -0.54
PDPN-204ENST00000475043 DZIP1LQ8IYY4 767 aaKnown RBP11.69□□□□□ -0.54
PDPN-204ENST00000475043 TEKT1Q969V4 418 aa11.69□□□□□ -0.54
PDPN-204ENST00000475043 GNL3LQ9NVN8 582 aaKnown RBP11.69□□□□□ -0.54
PDPN-204ENST00000475043 ZNF70Q9UC06 446 aaPredicted RBP11.69□□□□□ -0.54
PDPN-204ENST00000475043 MAST3O60307 1309 aa11.68□□□□□ -0.54
PDPN-204ENST00000475043 TCP10L2B9ZVM9 353 aa11.68□□□□□ -0.54
PDPN-204ENST00000475043 PPP1R12BO60237 982 aaPredicted RBP11.68□□□□□ -0.54
PDPN-204ENST00000475043 MTX1Q13505 466 aa11.68□□□□□ -0.54
PDPN-204ENST00000475043 RASA3Q14644 834 aa11.68□□□□□ -0.54
PDPN-204ENST00000475043 SUPT20HL1Q3ZLR7 823 aa11.68□□□□□ -0.54
PDPN-204ENST00000475043 NBPF12Q5TAG4 269 aaPredicted RBP11.68□□□□□ -0.54
PDPN-204ENST00000475043 ITPRIPQ8IWB1 547 aa11.68□□□□□ -0.54
PDPN-204ENST00000475043 WDR66Q8TBY9 1149 aa11.68□□□□□ -0.54
PDPN-204ENST00000475043 CSRNP1Q96S65 589 aa11.68□□□□□ -0.54
PDPN-204ENST00000475043 PNMA6EA0A0J9YXQ4 647 aa11.67□□□□□ -0.54
PDPN-204ENST00000475043 TRPA1O75762 1119 aa11.67□□□□□ -0.54
PDPN-204ENST00000475043 PHKA1P46020 1223 aa11.67□□□□□ -0.54
PDPN-204ENST00000475043 TNNI2P48788 182 aa11.67□□□□□ -0.54
PDPN-204ENST00000475043 TIMM10P62072 90 aa11.67□□□□□ -0.54
PDPN-204ENST00000475043 HDLBPQ00341 1268 aaKnown RBP11.67□□□□□ -0.54
PDPN-204ENST00000475043 TFCP2Q12800 502 aa11.67□□□□□ -0.54
PDPN-204ENST00000475043 NEUROD6Q96NK8 337 aa11.67□□□□□ -0.54
PDPN-204ENST00000475043 AKAP2Q9Y2D5 859 aa11.67□□□□□ -0.54
PDPN-204ENST00000475043 SUGT1Q9Y2Z0 365 aa11.67□□□□□ -0.54
PDPN-204ENST00000475043 SSC5DA1L4H1 1573 aa11.67□□□□□ -0.54
PDPN-204ENST00000475043 A0A1B0GUL7 405 aa11.66□□□□□ -0.54
PDPN-204ENST00000475043 ADORA1P30542 326 aa11.66□□□□□ -0.54
PDPN-204ENST00000475043 CACNB3P54284 484 aa11.66□□□□□ -0.54
PDPN-204ENST00000475043 G3BP1Q13283 466 aaKnown RBP eCLIP11.66□□□□□ -0.54
PDPN-204ENST00000475043 CCDC102BQ68D86 513 aa11.66□□□□□ -0.54
PDPN-204ENST00000475043 SLC10A4Q96EP9 437 aa11.66□□□□□ -0.54
PDPN-204ENST00000475043 ZDHHC15Q96MV8 337 aa11.66□□□□□ -0.54
PDPN-204ENST00000475043 C1orf115Q9H7X2 142 aa11.66□□□□□ -0.54
PDPN-204ENST00000475043 RNF186Q9NXI6 227 aa11.66□□□□□ -0.54
PDPN-204ENST00000475043 TMOD2Q9NZR1 351 aa11.66□□□□□ -0.54
PDPN-204ENST00000475043 DENND2AQ9ULE3 1009 aa11.66□□□□□ -0.54
PDPN-204ENST00000475043 CASP8AP2Q9UKL3 1982 aa11.66□□□□□ -0.54
PDPN-204ENST00000475043 SEMA3EO15041 775 aa11.65□□□□□ -0.54
PDPN-204ENST00000475043 LDHBP07195 334 aaKnown RBP11.65□□□□□ -0.54
PDPN-204ENST00000475043 RLBP1P12271 317 aa11.65□□□□□ -0.54
PDPN-204ENST00000475043 IREB2P48200 963 aaKnown RBP11.65□□□□□ -0.54
PDPN-204ENST00000475043 LDLRAD1Q5T700 205 aa11.65□□□□□ -0.54
PDPN-204ENST00000475043 GORABQ5T7V8 394 aa11.65□□□□□ -0.54
PDPN-204ENST00000475043 XAGE2Q96GT9 111 aa11.65□□□□□ -0.54
PDPN-204ENST00000475043 MRIQ9BWK5 157 aa11.65□□□□□ -0.54
PDPN-204ENST00000475043 TMEM39BQ9GZU3 492 aa11.65□□□□□ -0.54
PDPN-204ENST00000475043 SAGE1Q9NXZ1 904 aa11.65□□□□□ -0.54
PDPN-204ENST00000475043 PRDX5P30044 214 aa11.64□□□□□ -0.55
PDPN-204ENST00000475043 OS9Q13438 667 aaPredicted RBP11.64□□□□□ -0.55
PDPN-204ENST00000475043 MVPQ14764 893 aaKnown RBP11.64□□□□□ -0.55
PDPN-204ENST00000475043 DIXDC1Q155Q3 683 aa11.64□□□□□ -0.55
PDPN-204ENST00000475043 MAP3K11Q16584 847 aa11.64□□□□□ -0.55
PDPN-204ENST00000475043 APOBEC3HQ6NTF7 200 aaKnown RBP11.64□□□□□ -0.55
PDPN-204ENST00000475043 HHIPL2Q6UWX4 724 aa11.64□□□□□ -0.55
PDPN-204ENST00000475043 CDAN1Q8IWY9 1227 aa11.64□□□□□ -0.55
PDPN-204ENST00000475043 CLMNQ96JQ2 1002 aa11.64□□□□□ -0.55
PDPN-204ENST00000475043 ABCF2Q9UG63 623 aa11.64□□□□□ -0.55
PDPN-204ENST00000475043 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.64□□□□□ -0.55
PDPN-204ENST00000475043 OTOFQ9HC10 1997 aa11.64□□□□□ -0.55
PDPN-204ENST00000475043 AK9Q5TCS8 1911 aa11.63□□□□□ -0.55
PDPN-204ENST00000475043 MYH2Q9UKX2 1941 aa11.63□□□□□ -0.55
PDPN-204ENST00000475043 ZBTB7BO15156 539 aaPredicted RBP11.63□□□□□ -0.55
PDPN-204ENST00000475043 USP2O75604 605 aaPredicted RBP11.63□□□□□ -0.55
PDPN-204ENST00000475043 ATP8B2P98198 1209 aa11.63□□□□□ -0.55
PDPN-204ENST00000475043 SREBF2Q12772 1141 aa11.63□□□□□ -0.55
PDPN-204ENST00000475043 RASGRF1Q13972 1273 aa11.63□□□□□ -0.55
PDPN-204ENST00000475043 SPRYD7Q5W111 196 aa11.63□□□□□ -0.55
PDPN-204ENST00000475043 DZIP1Q86YF9 867 aaKnown RBP11.63□□□□□ -0.55
PDPN-204ENST00000475043 ANKRD13AQ8IZ07 590 aa11.63□□□□□ -0.55
PDPN-204ENST00000475043 ZGPATQ8N5A5 531 aaKnown RBP11.63□□□□□ -0.55
PDPN-204ENST00000475043 PANK1Q8TE04 598 aa11.63□□□□□ -0.55
PDPN-204ENST00000475043 TEPSINQ96N21 525 aa11.63□□□□□ -0.55
PDPN-204ENST00000475043 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.63□□□□□ -0.55
PDPN-204ENST00000475043 SALL1Q9NSC2 1324 aa11.62□□□□□ -0.55
PDPN-204ENST00000475043 SURF6O75683 361 aaKnown RBP11.62□□□□□ -0.55
PDPN-204ENST00000475043 TM4SF4P48230 202 aa11.62□□□□□ -0.55
PDPN-204ENST00000475043 SSH3Q8TE77 659 aa11.62□□□□□ -0.55
PDPN-204ENST00000475043 WNK4Q96J92 1243 aa11.62□□□□□ -0.55
PDPN-204ENST00000475043 DAGLAQ9Y4D2 1042 aa11.62□□□□□ -0.55
PDPN-204ENST00000475043 UNCXA6NJT0 531 aa11.61□□□□□ -0.55
PDPN-204ENST00000475043 TBC1D8O95759 1140 aa11.61□□□□□ -0.55
PDPN-204ENST00000475043 ZBTB48P10074 688 aaPredicted RBP11.61□□□□□ -0.55
PDPN-204ENST00000475043 MS4A1P11836 297 aa11.61□□□□□ -0.55
PDPN-204ENST00000475043 TCP10Q12799 353 aa11.61□□□□□ -0.55
PDPN-204ENST00000475043 DGKZQ13574 1117 aa11.61□□□□□ -0.55
PDPN-204ENST00000475043 FKBP1CQ5VVH2 108 aa11.61□□□□□ -0.55
PDPN-204ENST00000475043 CDC42EP5Q6NZY7 148 aa11.61□□□□□ -0.55
PDPN-204ENST00000475043 FAM83AQ86UY5 434 aa11.61□□□□□ -0.55
PDPN-204ENST00000475043 HOOK2Q96ED9 719 aa11.61□□□□□ -0.55
PDPN-204ENST00000475043 ABHD8Q96I13 439 aa11.61□□□□□ -0.55
PDPN-204ENST00000475043 ELP3Q9H9T3 547 aa11.61□□□□□ -0.55
PDPN-204ENST00000475043 LAMB1P07942 1786 aa11.61□□□□□ -0.55
PDPN-204ENST00000475043 PDS5AQ29RF7 1337 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms