RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 HDLBPQ00341 1268 aaKnown RBP16.26■□□□□ 0.19
RTN1-205ENST00000474911 PAXIP1Q6ZW49 1069 aaPredicted RBP16.26■□□□□ 0.19
RTN1-205ENST00000474911 GNL3LQ9NVN8 582 aaKnown RBP16.26■□□□□ 0.19
RTN1-205ENST00000474911 TTF2Q9UNY4 1162 aaKnown RBP16.26■□□□□ 0.19
RTN1-205ENST00000474911 MYH7P12883 1935 aa16.26■□□□□ 0.19
RTN1-205ENST00000474911 CHMLP26374 656 aa16.25■□□□□ 0.19
RTN1-205ENST00000474911 MAP2K2P36507 400 aa16.25■□□□□ 0.19
RTN1-205ENST00000474911 MCAMP43121 646 aa16.25■□□□□ 0.19
RTN1-205ENST00000474911 MAP2K1Q02750 393 aaPredicted RBP16.25■□□□□ 0.19
RTN1-205ENST00000474911 CHAF1AQ13111 956 aaPredicted RBP16.25■□□□□ 0.19
RTN1-205ENST00000474911 TICAM2Q86XR7 235 aa16.25■□□□□ 0.19
RTN1-205ENST00000474911 PRMT6Q96LA8 375 aaPredicted RBP16.25■□□□□ 0.19
RTN1-205ENST00000474911 FSD1Q9BTV5 496 aa16.25■□□□□ 0.19
RTN1-205ENST00000474911 MRIQ9BWK5 157 aa16.25■□□□□ 0.19
RTN1-205ENST00000474911 GOLIM4O00461 696 aa16.24■□□□□ 0.19
RTN1-205ENST00000474911 SEMA3EO15041 775 aa16.24■□□□□ 0.19
RTN1-205ENST00000474911 WDR66Q8TBY9 1149 aa16.24■□□□□ 0.19
RTN1-205ENST00000474911 UPF2Q9HAU5 1272 aaKnown RBP16.24■□□□□ 0.19
RTN1-205ENST00000474911 DIAPH3Q9NSV4 1193 aa16.24■□□□□ 0.19
RTN1-205ENST00000474911 WBP1LQ9NX94 342 aa16.24■□□□□ 0.19
RTN1-205ENST00000474911 SCAF8Q9UPN6 1271 aaKnown RBP16.24■□□□□ 0.19
RTN1-205ENST00000474911 PCDHAC2Q9Y5I4 1007 aa16.24■□□□□ 0.19
RTN1-205ENST00000474911 PPP2R3BQ9Y5P8 575 aa16.24■□□□□ 0.19
RTN1-205ENST00000474911 NPM3O75607 178 aaKnown RBP16.23■□□□□ 0.19
RTN1-205ENST00000474911 NF2P35240 595 aa16.23■□□□□ 0.19
RTN1-205ENST00000474911 ZAP70P43403 619 aa16.23■□□□□ 0.19
RTN1-205ENST00000474911 RBM5P52756 815 aaKnown RBP eCLIP16.23■□□□□ 0.19
RTN1-205ENST00000474911 TTF1Q15361 905 aaPredicted RBP16.23■□□□□ 0.19
RTN1-205ENST00000474911 RGMBQ6NW40 437 aa16.23■□□□□ 0.19
RTN1-205ENST00000474911 KBTBD3Q8NAB2 608 aa16.23■□□□□ 0.19
RTN1-205ENST00000474911 EDC3Q96F86 508 aaKnown RBP16.23■□□□□ 0.19
RTN1-205ENST00000474911 SNRKQ9NRH2 765 aa16.23■□□□□ 0.19
RTN1-205ENST00000474911 NDUFB9Q9Y6M9 179 aa16.23■□□□□ 0.19
RTN1-205ENST00000474911 MAST3O60307 1309 aa16.23■□□□□ 0.19
RTN1-205ENST00000474911 SEC24BO95487 1268 aa16.22■□□□□ 0.19
RTN1-205ENST00000474911 CRKP46108 304 aa16.22■□□□□ 0.19
RTN1-205ENST00000474911 NOGQ13253 232 aa16.22■□□□□ 0.19
RTN1-205ENST00000474911 RASGRF1Q13972 1273 aa16.22■□□□□ 0.19
RTN1-205ENST00000474911 GRIK5Q16478 980 aa16.22■□□□□ 0.19
RTN1-205ENST00000474911 LRRFIP1Q32MZ4 808 aaKnown RBP16.22■□□□□ 0.19
RTN1-205ENST00000474911 SPATA5Q8NB90 893 aa16.22■□□□□ 0.19
RTN1-205ENST00000474911 RUFY2Q8WXA3 655 aa16.22■□□□□ 0.19
RTN1-205ENST00000474911 DEFB129Q9H1M3 183 aa16.22■□□□□ 0.19
RTN1-205ENST00000474911 HMG20BQ9P0W2 317 aa16.22■□□□□ 0.19
RTN1-205ENST00000474911 DENND2AQ9ULE3 1009 aa16.22■□□□□ 0.19
RTN1-205ENST00000474911 DOCK2Q92608 1830 aa16.22■□□□□ 0.19
RTN1-205ENST00000474911 MFAP1P55081 439 aaKnown RBP16.21■□□□□ 0.19
RTN1-205ENST00000474911 GRM1Q13255 1194 aa16.21■□□□□ 0.19
RTN1-205ENST00000474911 SPDYE2Q495Y8 402 aa16.21■□□□□ 0.19
RTN1-205ENST00000474911 PRAMEF18Q5VWM3 479 aa16.21■□□□□ 0.19
RTN1-205ENST00000474911 PI16Q6UXB8 463 aa16.21■□□□□ 0.19
RTN1-205ENST00000474911 CCDC102AQ96A19 550 aa16.21■□□□□ 0.19
RTN1-205ENST00000474911 AIDAQ96BJ3 306 aa16.21■□□□□ 0.19
RTN1-205ENST00000474911 ESYT1Q9BSJ8 1104 aa16.21■□□□□ 0.19
RTN1-205ENST00000474911 PDS5AQ29RF7 1337 aaKnown RBP16.21■□□□□ 0.19
RTN1-205ENST00000474911 SALL1Q9NSC2 1324 aa16.21■□□□□ 0.19
RTN1-205ENST00000474911 MYO5AQ9Y4I1 1855 aaKnown RBP16.21■□□□□ 0.19
RTN1-205ENST00000474911 CLRN2A0PK11 232 aa16.2■□□□□ 0.18
RTN1-205ENST00000474911 FAM155AB1AL88 458 aaPredicted RBP16.2■□□□□ 0.18
RTN1-205ENST00000474911 REC8O95072 547 aa16.2■□□□□ 0.18
RTN1-205ENST00000474911 TNFAIP1Q13829 316 aa16.2■□□□□ 0.18
RTN1-205ENST00000474911 TEKT1Q969V4 418 aa16.2■□□□□ 0.18
RTN1-205ENST00000474911 ZDHHC15Q96MV8 337 aa16.2■□□□□ 0.18
RTN1-205ENST00000474911 ANTXR1Q9H6X2 564 aa16.2■□□□□ 0.18
RTN1-205ENST00000474911 RAD50Q92878 1312 aa16.19■□□□□ 0.18
RTN1-205ENST00000474911 FOXN1O15353 648 aa16.19■□□□□ 0.18
RTN1-205ENST00000474911 AOC2O75106 756 aa16.19■□□□□ 0.18
RTN1-205ENST00000474911 CYP2E1P05181 493 aaPredicted RBP16.19■□□□□ 0.18
RTN1-205ENST00000474911 ZNF157P51786 506 aaPredicted RBP16.19■□□□□ 0.18
RTN1-205ENST00000474911 HHIPL2Q6UWX4 724 aa16.19■□□□□ 0.18
RTN1-205ENST00000474911 ZNF70Q9UC06 446 aaPredicted RBP16.19■□□□□ 0.18
RTN1-205ENST00000474911 SLC10A3P09131 477 aa16.19■□□□□ 0.18
RTN1-205ENST00000474911 CWC27Q6UX04 472 aaKnown RBP16.19■□□□□ 0.18
RTN1-205ENST00000474911 ZGPATQ8N5A5 531 aaKnown RBP16.19■□□□□ 0.18
RTN1-205ENST00000474911 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.19■□□□□ 0.18
RTN1-205ENST00000474911 TDRD3Q9H7E2 651 aaKnown RBP16.19■□□□□ 0.18
RTN1-205ENST00000474911 VEZTQ9HBM0 779 aa16.19■□□□□ 0.18
RTN1-205ENST00000474911 MYH2Q9UKX2 1941 aa16.18■□□□□ 0.18
RTN1-205ENST00000474911 SGSM2O43147 1006 aa16.18■□□□□ 0.18
RTN1-205ENST00000474911 ZFYP08048 801 aaPredicted RBP16.18■□□□□ 0.18
RTN1-205ENST00000474911 CTCFP49711 727 aaPredicted RBP16.18■□□□□ 0.18
RTN1-205ENST00000474911 NMIQ13287 307 aaPredicted RBP16.18■□□□□ 0.18
RTN1-205ENST00000474911 SUPT20HL1Q3ZLR7 823 aa16.18■□□□□ 0.18
RTN1-205ENST00000474911 ZSCAN25Q6NSZ9 544 aa16.18■□□□□ 0.18
RTN1-205ENST00000474911 ARMC9Q7Z3E5 817 aa16.18■□□□□ 0.18
RTN1-205ENST00000474911 PIH1D3Q9NQM4 214 aaKnown RBP16.18■□□□□ 0.18
RTN1-205ENST00000474911 RNF113AO15541 343 aaKnown RBP16.17■□□□□ 0.18
RTN1-205ENST00000474911 PRDX5P30044 214 aa16.17■□□□□ 0.18
RTN1-205ENST00000474911 RASA3Q14644 834 aa16.17■□□□□ 0.18
RTN1-205ENST00000474911 MAP3K11Q16584 847 aa16.17■□□□□ 0.18
RTN1-205ENST00000474911 MOB2Q70IA6 237 aa16.17■□□□□ 0.18
RTN1-205ENST00000474911 BEGAINQ9BUH8 593 aa16.17■□□□□ 0.18
RTN1-205ENST00000474911 RBM19Q9Y4C8 960 aaKnown RBP16.17■□□□□ 0.18
RTN1-205ENST00000474911 SSC5DA1L4H1 1573 aa16.17■□□□□ 0.18
RTN1-205ENST00000474911 UNCXA6NJT0 531 aa16.16■□□□□ 0.18
RTN1-205ENST00000474911 CA12O43570 354 aa16.16■□□□□ 0.18
RTN1-205ENST00000474911 LDHBP07195 334 aaKnown RBP16.16■□□□□ 0.18
RTN1-205ENST00000474911 TNNI2P48788 182 aa16.16■□□□□ 0.18
RTN1-205ENST00000474911 TTLL12Q14166 644 aaPredicted RBP16.16■□□□□ 0.18
RTN1-205ENST00000474911 APOBEC3HQ6NTF7 200 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms