RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 USP40Q9NVE5 1235 aa19.65■□□□□ 0.74
ITGB1-210ENST00000474568 RAI14Q9P0K7 980 aa19.65■□□□□ 0.74
ITGB1-210ENST00000474568 PDS5AQ29RF7 1337 aaKnown RBP19.65■□□□□ 0.74
ITGB1-210ENST00000474568 ZBTB22O15209 634 aa19.64■□□□□ 0.73
ITGB1-210ENST00000474568 PPP1R12BO60237 982 aaPredicted RBP19.64■□□□□ 0.73
ITGB1-210ENST00000474568 CTCFP49711 727 aaPredicted RBP19.64■□□□□ 0.73
ITGB1-210ENST00000474568 HSP90AB4PQ58FF6 505 aa19.64■□□□□ 0.73
ITGB1-210ENST00000474568 RHPN1Q8TCX5 695 aa19.64■□□□□ 0.73
ITGB1-210ENST00000474568 TEPSINQ96N21 525 aa19.64■□□□□ 0.73
ITGB1-210ENST00000474568 THSD7BQ9C0I4 1608 aa19.64■□□□□ 0.73
ITGB1-210ENST00000474568 HSPA8P11142 646 aaKnown RBP19.63■□□□□ 0.73
ITGB1-210ENST00000474568 LBX1P52954 281 aa19.63■□□□□ 0.73
ITGB1-210ENST00000474568 MECOMQ03112 1051 aa19.63■□□□□ 0.73
ITGB1-210ENST00000474568 TCP10Q12799 353 aa19.63■□□□□ 0.73
ITGB1-210ENST00000474568 CLMNQ96JQ2 1002 aa19.63■□□□□ 0.73
ITGB1-210ENST00000474568 ECM29Q5VYK3 1845 aa19.62■□□□□ 0.73
ITGB1-210ENST00000474568 USP2O75604 605 aaPredicted RBP19.62■□□□□ 0.73
ITGB1-210ENST00000474568 NFIAQ12857 509 aa19.62■□□□□ 0.73
ITGB1-210ENST00000474568 LDLRAD1Q5T700 205 aa19.62■□□□□ 0.73
ITGB1-210ENST00000474568 LRP2BPQ9P2M1 347 aa19.62■□□□□ 0.73
ITGB1-210ENST00000474568 BTDP43251 543 aa19.61■□□□□ 0.73
ITGB1-210ENST00000474568 ZAP70P43403 619 aa19.61■□□□□ 0.73
ITGB1-210ENST00000474568 IREB2P48200 963 aaKnown RBP19.61■□□□□ 0.73
ITGB1-210ENST00000474568 ZNF384Q8TF68 577 aa19.61■□□□□ 0.73
ITGB1-210ENST00000474568 KIF1BPQ96EK5 621 aa19.61■□□□□ 0.73
ITGB1-210ENST00000474568 NDUFB9Q9Y6M9 179 aa19.61■□□□□ 0.73
ITGB1-210ENST00000474568 MROH7-TTC4A0A0A0MT08 1334 aa19.6■□□□□ 0.73
ITGB1-210ENST00000474568 GAKO14976 1311 aa19.6■□□□□ 0.73
ITGB1-210ENST00000474568 MAP3K11Q16584 847 aa19.6■□□□□ 0.73
ITGB1-210ENST00000474568 FAM83AQ86UY5 434 aa19.6■□□□□ 0.73
ITGB1-210ENST00000474568 SLF2Q8IX21 1173 aa19.6■□□□□ 0.73
ITGB1-210ENST00000474568 NSUN4Q96CB9 384 aaKnown RBP19.6■□□□□ 0.73
ITGB1-210ENST00000474568 SLC10A4Q96EP9 437 aa19.6■□□□□ 0.73
ITGB1-210ENST00000474568 CSRNP1Q96S65 589 aa19.6■□□□□ 0.73
ITGB1-210ENST00000474568 CYP2E1P05181 493 aaPredicted RBP19.59■□□□□ 0.73
ITGB1-210ENST00000474568 FKBP1CQ5VVH2 108 aa19.59■□□□□ 0.73
ITGB1-210ENST00000474568 CLASRPQ8N2M8 674 aaKnown RBP19.59■□□□□ 0.73
ITGB1-210ENST00000474568 CRBNQ96SW2 442 aa19.59■□□□□ 0.73
ITGB1-210ENST00000474568 PIH1D3Q9NQM4 214 aaKnown RBP19.59■□□□□ 0.73
ITGB1-210ENST00000474568 FAM198AQ9UFP1 575 aa19.59■□□□□ 0.73
ITGB1-210ENST00000474568 RAB11FIP3O75154 756 aa19.58■□□□□ 0.72
ITGB1-210ENST00000474568 PICALMQ13492 652 aa19.58■□□□□ 0.72
ITGB1-210ENST00000474568 MIGA2Q7L4E1 593 aa19.58■□□□□ 0.72
ITGB1-210ENST00000474568 ZFPM1Q8IX07 1006 aa19.58■□□□□ 0.72
ITGB1-210ENST00000474568 FAM151AQ8WW52 585 aa19.58■□□□□ 0.72
ITGB1-210ENST00000474568 ELP3Q9H9T3 547 aa19.58■□□□□ 0.72
ITGB1-210ENST00000474568 SMARCA5O60264 1052 aaPredicted RBP19.57■□□□□ 0.72
ITGB1-210ENST00000474568 IFIT2P09913 472 aaKnown RBP19.57■□□□□ 0.72
ITGB1-210ENST00000474568 RGS3P49796 1198 aa19.57■□□□□ 0.72
ITGB1-210ENST00000474568 GSTO1P78417 241 aa19.57■□□□□ 0.72
ITGB1-210ENST00000474568 SPRYD7Q5W111 196 aa19.57■□□□□ 0.72
ITGB1-210ENST00000474568 ANKRD13AQ8IZ07 590 aa19.57■□□□□ 0.72
ITGB1-210ENST00000474568 FAM163AQ96GL9 167 aaPredicted RBP19.57■□□□□ 0.72
ITGB1-210ENST00000474568 ZNF512BQ96KM6 892 aaPredicted RBP19.57■□□□□ 0.72
ITGB1-210ENST00000474568 TRPA1O75762 1119 aa19.56■□□□□ 0.72
ITGB1-210ENST00000474568 LDHCP07864 332 aa19.56■□□□□ 0.72
ITGB1-210ENST00000474568 NAA16Q6N069 864 aaPredicted RBP19.56■□□□□ 0.72
ITGB1-210ENST00000474568 WNK4Q96J92 1243 aa19.56■□□□□ 0.72
ITGB1-210ENST00000474568 DDX4Q9NQI0 724 aaKnown RBP19.56■□□□□ 0.72
ITGB1-210ENST00000474568 RNF186Q9NXI6 227 aa19.56■□□□□ 0.72
ITGB1-210ENST00000474568 GPR75-ASB3A0A0A6YYF3 556 aa19.55■□□□□ 0.72
ITGB1-210ENST00000474568 MAP3K9P80192 1104 aa19.55■□□□□ 0.72
ITGB1-210ENST00000474568 ZSCAN29Q8IWY8 852 aaPredicted RBP19.55■□□□□ 0.72
ITGB1-210ENST00000474568 CNKSR2Q8WXI2 1034 aa19.55■□□□□ 0.72
ITGB1-210ENST00000474568 ANTXR1Q9H6X2 564 aa19.55■□□□□ 0.72
ITGB1-210ENST00000474568 PRDM10Q9NQV6 1147 aa19.55■□□□□ 0.72
ITGB1-210ENST00000474568 PCDHB15Q9Y5E8 787 aa19.55■□□□□ 0.72
ITGB1-210ENST00000474568 CA12O43570 354 aa19.54■□□□□ 0.72
ITGB1-210ENST00000474568 WDHD1O75717 1129 aaPredicted RBP19.54■□□□□ 0.72
ITGB1-210ENST00000474568 IDH1O75874 414 aaKnown RBP19.54■□□□□ 0.72
ITGB1-210ENST00000474568 GJA5P36382 358 aa19.54■□□□□ 0.72
ITGB1-210ENST00000474568 RHBDL3P58872 404 aa19.54■□□□□ 0.72
ITGB1-210ENST00000474568 VGLL4Q14135 290 aa19.54■□□□□ 0.72
ITGB1-210ENST00000474568 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.54■□□□□ 0.72
ITGB1-210ENST00000474568 TNS4Q8IZW8 715 aa19.54■□□□□ 0.72
ITGB1-210ENST00000474568 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.54■□□□□ 0.72
ITGB1-210ENST00000474568 WRNIP1Q96S55 665 aa19.54■□□□□ 0.72
ITGB1-210ENST00000474568 IDI2Q9BXS1 227 aa19.54■□□□□ 0.72
ITGB1-210ENST00000474568 RPAP1Q9BWH6 1393 aaPredicted RBP19.54■□□□□ 0.72
ITGB1-210ENST00000474568 DCAF15Q66K64 600 aa19.53■□□□□ 0.72
ITGB1-210ENST00000474568 ADGRA1Q86SQ6 560 aa19.53■□□□□ 0.72
ITGB1-210ENST00000474568 ZKSCAN4Q969J2 545 aaPredicted RBP19.53■□□□□ 0.72
ITGB1-210ENST00000474568 HOOK2Q96ED9 719 aa19.53■□□□□ 0.72
ITGB1-210ENST00000474568 DNAJC2Q99543 621 aaKnown RBP19.53■□□□□ 0.72
ITGB1-210ENST00000474568 NOL10Q9BSC4 688 aaKnown RBP19.53■□□□□ 0.72
ITGB1-210ENST00000474568 ZNF341Q9BYN7 854 aa19.53■□□□□ 0.72
ITGB1-210ENST00000474568 LRRCC1Q9C099 1032 aa19.53■□□□□ 0.72
ITGB1-210ENST00000474568 AATFQ9NY61 560 aaKnown RBP eCLIP19.53■□□□□ 0.722e-7■□□□□ 10.9
ITGB1-210ENST00000474568 CSADQ9Y600 493 aa19.53■□□□□ 0.72
ITGB1-210ENST00000474568 MYH2Q9UKX2 1941 aa19.53■□□□□ 0.72
ITGB1-210ENST00000474568 ENTPD3O75355 529 aa19.52■□□□□ 0.72
ITGB1-210ENST00000474568 SLURP2P0DP57 97 aa19.52■□□□□ 0.72
ITGB1-210ENST00000474568 SH3BP5LQ7L8J4 393 aa19.52■□□□□ 0.72
ITGB1-210ENST00000474568 TEX11Q8IYF3 940 aa19.52■□□□□ 0.72
ITGB1-210ENST00000474568 SH3RF3Q8TEJ3 882 aaPredicted RBP19.52■□□□□ 0.72
ITGB1-210ENST00000474568 OPTNQ96CV9 577 aa19.52■□□□□ 0.72
ITGB1-210ENST00000474568 RFX7Q2KHR2 1363 aa19.52■□□□□ 0.72
ITGB1-210ENST00000474568 DDTLA6NHG4 134 aaPredicted RBP19.51■□□□□ 0.71
ITGB1-210ENST00000474568 CYP7A1P22680 504 aa19.51■□□□□ 0.71
ITGB1-210ENST00000474568 INPP5BP32019 993 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms