RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 SDSP20132 328 aa11.03□□□□□ -0.64
SMG5-203ENST00000473643 HDLBPQ00341 1268 aaKnown RBP11.03□□□□□ -0.64
SMG5-203ENST00000473643 NOGQ13253 232 aa11.03□□□□□ -0.64
SMG5-203ENST00000473643 TTF1Q15361 905 aaPredicted RBP11.03□□□□□ -0.64
SMG5-203ENST00000473643 GRIK5Q16478 980 aa11.03□□□□□ -0.64
SMG5-203ENST00000473643 PI16Q6UXB8 463 aa11.03□□□□□ -0.64
SMG5-203ENST00000473643 TBC1D22AQ8WUA7 517 aa11.03□□□□□ -0.64
SMG5-203ENST00000473643 ZIC5Q96T25 663 aa11.03□□□□□ -0.64
SMG5-203ENST00000473643 PRDM10Q9NQV6 1147 aa11.03□□□□□ -0.64
SMG5-203ENST00000473643 SNRKQ9NRH2 765 aa11.03□□□□□ -0.64
SMG5-203ENST00000473643 PAG1Q9NWQ8 432 aa11.03□□□□□ -0.64
SMG5-203ENST00000473643 TTF2Q9UNY4 1162 aaKnown RBP11.03□□□□□ -0.64
SMG5-203ENST00000473643 IQSEC3Q9UPP2 1182 aaPredicted RBP11.03□□□□□ -0.64
SMG5-203ENST00000473643 COL1A1P02452 1464 aaPredicted RBP11.02□□□□□ -0.65
SMG5-203ENST00000473643 MYO1BO43795 1136 aa11.02□□□□□ -0.65
SMG5-203ENST00000473643 FRAT2O75474 233 aaPredicted RBP11.02□□□□□ -0.65
SMG5-203ENST00000473643 ZNF157P51786 506 aaPredicted RBP11.02□□□□□ -0.65
SMG5-203ENST00000473643 TMED8Q6PL24 325 aaPredicted RBP11.02□□□□□ -0.65
SMG5-203ENST00000473643 KBTBD3Q8NAB2 608 aa11.02□□□□□ -0.65
SMG5-203ENST00000473643 DNAJC2Q99543 621 aaKnown RBP11.02□□□□□ -0.65
SMG5-203ENST00000473643 ANTXR1Q9H6X2 564 aa11.02□□□□□ -0.65
SMG5-203ENST00000473643 SUGT1Q9Y2Z0 365 aa11.02□□□□□ -0.65
SMG5-203ENST00000473643 TRIM6-TRIM34B2RNG4 842 aa11.01□□□□□ -0.65
SMG5-203ENST00000473643 UBE2Q2LH0YL09 131 aa11.01□□□□□ -0.65
SMG5-203ENST00000473643 GOLIM4O00461 696 aa11.01□□□□□ -0.65
SMG5-203ENST00000473643 HSPA8P11142 646 aaKnown RBP11.01□□□□□ -0.65
SMG5-203ENST00000473643 CRKP46108 304 aa11.01□□□□□ -0.65
SMG5-203ENST00000473643 RBM5P52756 815 aaKnown RBP eCLIP11.01□□□□□ -0.65
SMG5-203ENST00000473643 CHAF1AQ13111 956 aaPredicted RBP11.01□□□□□ -0.65
SMG5-203ENST00000473643 MOB2Q70IA6 237 aa11.01□□□□□ -0.65
SMG5-203ENST00000473643 ZGPATQ8N5A5 531 aaKnown RBP11.01□□□□□ -0.65
SMG5-203ENST00000473643 EDC3Q96F86 508 aaKnown RBP11.01□□□□□ -0.65
SMG5-203ENST00000473643 BEGAINQ9BUH8 593 aa11.01□□□□□ -0.65
SMG5-203ENST00000473643 PIH1D3Q9NQM4 214 aaKnown RBP11.01□□□□□ -0.65
SMG5-203ENST00000473643 PPP2R3BQ9Y5P8 575 aa11.01□□□□□ -0.65
SMG5-203ENST00000473643 NDUFB9Q9Y6M9 179 aa11.01□□□□□ -0.65
SMG5-203ENST00000473643 CLRN2A0PK11 232 aa11□□□□□ -0.65
SMG5-203ENST00000473643 CA12O43570 354 aa11□□□□□ -0.65
SMG5-203ENST00000473643 MAP4K4O95819 1239 aaPredicted RBP11□□□□□ -0.65
SMG5-203ENST00000473643 SLC10A3P09131 477 aa11□□□□□ -0.65
SMG5-203ENST00000473643 NF2P35240 595 aa11□□□□□ -0.65
SMG5-203ENST00000473643 LBX1P52954 281 aa11□□□□□ -0.65
SMG5-203ENST00000473643 KIF23Q02241 960 aaPredicted RBP11□□□□□ -0.65
SMG5-203ENST00000473643 SPDYE2Q495Y8 402 aa11□□□□□ -0.65
SMG5-203ENST00000473643 LDLRAD1Q5T700 205 aa11□□□□□ -0.65
SMG5-203ENST00000473643 SPTY2D1Q68D10 685 aaPredicted RBP11□□□□□ -0.65
SMG5-203ENST00000473643 TBC1D9Q6ZT07 1266 aa11□□□□□ -0.65
SMG5-203ENST00000473643 ZNF70Q9UC06 446 aaPredicted RBP11□□□□□ -0.65
SMG5-203ENST00000473643 RFX7Q2KHR2 1363 aa11□□□□□ -0.65
SMG5-203ENST00000473643 ZFYP08048 801 aaPredicted RBP10.99□□□□□ -0.65
SMG5-203ENST00000473643 MAP3K12Q12852 859 aa10.99□□□□□ -0.65
SMG5-203ENST00000473643 RASA3Q14644 834 aa10.99□□□□□ -0.65
SMG5-203ENST00000473643 MAP3K11Q16584 847 aa10.99□□□□□ -0.65
SMG5-203ENST00000473643 LRRFIP1Q32MZ4 808 aaKnown RBP10.99□□□□□ -0.65
SMG5-203ENST00000473643 SUPT20HL1Q3ZLR7 823 aa10.99□□□□□ -0.65
SMG5-203ENST00000473643 ZSCAN25Q6NSZ9 544 aa10.99□□□□□ -0.65
SMG5-203ENST00000473643 APOBEC3HQ6NTF7 200 aaKnown RBP10.99□□□□□ -0.65
SMG5-203ENST00000473643 HHIPL2Q6UWX4 724 aa10.99□□□□□ -0.65
SMG5-203ENST00000473643 RASAL3Q86YV0 1011 aa10.99□□□□□ -0.65
SMG5-203ENST00000473643 REM2Q8IYK8 340 aaPredicted RBP10.99□□□□□ -0.65
SMG5-203ENST00000473643 RILPL2Q969X0 211 aa10.99□□□□□ -0.65
SMG5-203ENST00000473643 ZDHHC15Q96MV8 337 aa10.99□□□□□ -0.65
SMG5-203ENST00000473643 CSRNP1Q96S65 589 aa10.99□□□□□ -0.65
SMG5-203ENST00000473643 TDRD3Q9H7E2 651 aaKnown RBP10.99□□□□□ -0.65
SMG5-203ENST00000473643 THSD7BQ9C0I4 1608 aa10.98□□□□□ -0.65
SMG5-203ENST00000473643 AKAP11Q9UKA4 1901 aa10.98□□□□□ -0.65
SMG5-203ENST00000473643 UNCXA6NJT0 531 aa10.98□□□□□ -0.65
SMG5-203ENST00000473643 HIP1O00291 1037 aa10.98□□□□□ -0.65
SMG5-203ENST00000473643 TTLL12Q14166 644 aaPredicted RBP10.98□□□□□ -0.65
SMG5-203ENST00000473643 UBE3CQ15386 1083 aa10.98□□□□□ -0.65
SMG5-203ENST00000473643 NBPF12Q5TAG4 269 aaPredicted RBP10.98□□□□□ -0.65
SMG5-203ENST00000473643 ERICH6Q7L0X2 663 aa10.98□□□□□ -0.65
SMG5-203ENST00000473643 ARMC9Q7Z3E5 817 aa10.98□□□□□ -0.65
SMG5-203ENST00000473643 TNS4Q8IZW8 715 aa10.98□□□□□ -0.65
SMG5-203ENST00000473643 TEKT1Q969V4 418 aa10.98□□□□□ -0.65
SMG5-203ENST00000473643 NSUN4Q96CB9 384 aaKnown RBP10.98□□□□□ -0.65
SMG5-203ENST00000473643 FAM163AQ96GL9 167 aaPredicted RBP10.98□□□□□ -0.65
SMG5-203ENST00000473643 TEPSINQ96N21 525 aa10.98□□□□□ -0.65
SMG5-203ENST00000473643 FSD1Q9BTV5 496 aa10.98□□□□□ -0.65
SMG5-203ENST00000473643 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.98□□□□□ -0.659e-8■■□□□ 14.4
SMG5-203ENST00000473643 VEZTQ9HBM0 779 aa10.98□□□□□ -0.65
SMG5-203ENST00000473643 LRP2BPQ9P2M1 347 aa10.98□□□□□ -0.65
SMG5-203ENST00000473643 ABCF2Q9UG63 623 aa10.98□□□□□ -0.65
SMG5-203ENST00000473643 TCRBV5S4A2TA0A5A2 114 aa10.97□□□□□ -0.65
SMG5-203ENST00000473643 RNF113AO15541 343 aaKnown RBP10.97□□□□□ -0.65
SMG5-203ENST00000473643 PPP1R12BO60237 982 aaPredicted RBP10.97□□□□□ -0.65
SMG5-203ENST00000473643 CDC45O75419 566 aa10.97□□□□□ -0.65
SMG5-203ENST00000473643 IDH1O75874 414 aaKnown RBP10.97□□□□□ -0.65
SMG5-203ENST00000473643 LDHBP07195 334 aaKnown RBP10.97□□□□□ -0.65
SMG5-203ENST00000473643 CHMLP26374 656 aa10.97□□□□□ -0.65
SMG5-203ENST00000473643 PRDX5P30044 214 aa10.97□□□□□ -0.65
SMG5-203ENST00000473643 ADD2P35612 726 aa10.97□□□□□ -0.65
SMG5-203ENST00000473643 TNFAIP1Q13829 316 aa10.97□□□□□ -0.65
SMG5-203ENST00000473643 FKBP1CQ5VVH2 108 aa10.97□□□□□ -0.65
SMG5-203ENST00000473643 ZNF384Q8TF68 577 aa10.97□□□□□ -0.65
SMG5-203ENST00000473643 MAST3O60307 1309 aa10.97□□□□□ -0.65
SMG5-203ENST00000473643 USP2O75604 605 aaPredicted RBP10.96□□□□□ -0.65
SMG5-203ENST00000473643 PDE6AP16499 860 aa10.96□□□□□ -0.65
SMG5-203ENST00000473643 MECOMQ03112 1051 aa10.96□□□□□ -0.65
SMG5-203ENST00000473643 PRKG1Q13976 671 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms