RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 SUCLG2Q96I99 432 aa11.84□□□□□ -0.51
VCL-204ENST00000472585 NBPF7P0C2Y1 421 aaPredicted RBP11.83□□□□□ -0.52
VCL-204ENST00000472585 CETPP11597 493 aa11.83□□□□□ -0.52
VCL-204ENST00000472585 GJA8P48165 433 aa11.83□□□□□ -0.52
VCL-204ENST00000472585 VASPP50552 380 aaPredicted RBP11.83□□□□□ -0.52
VCL-204ENST00000472585 UBE4AQ14139 1066 aa11.83□□□□□ -0.52
VCL-204ENST00000472585 CCDC57Q2TAC2 916 aa11.83□□□□□ -0.52
VCL-204ENST00000472585 LRRC24Q50LG9 513 aa11.83□□□□□ -0.52
VCL-204ENST00000472585 RNF208Q9H0X6 261 aa11.83□□□□□ -0.52
VCL-204ENST00000472585 PRO3102Q9H379 93 aa11.83□□□□□ -0.52
VCL-204ENST00000472585 CNNM1Q9NRU3 951 aa11.83□□□□□ -0.52
VCL-204ENST00000472585 ZBTB47Q9UFB7 747 aaPredicted RBP11.83□□□□□ -0.52
VCL-204ENST00000472585 SNCAIPQ9Y6H5 919 aa11.83□□□□□ -0.52
VCL-204ENST00000472585 A0A1B0GUL6 1792 aa11.82□□□□□ -0.52
VCL-204ENST00000472585 BTBD19C9JJ37 291 aa11.82□□□□□ -0.52
VCL-204ENST00000472585 ZBTB7BO15156 539 aaPredicted RBP11.82□□□□□ -0.52
VCL-204ENST00000472585 EVI5O60447 810 aa11.82□□□□□ -0.52
VCL-204ENST00000472585 GJB1P08034 283 aa11.82□□□□□ -0.52
VCL-204ENST00000472585 CCL5P13501 91 aa11.82□□□□□ -0.52
VCL-204ENST00000472585 GRK4P32298 578 aa11.82□□□□□ -0.52
VCL-204ENST00000472585 TNNI2P48788 182 aa11.82□□□□□ -0.52
VCL-204ENST00000472585 UBXN2AP68543 259 aa11.82□□□□□ -0.52
VCL-204ENST00000472585 APOBEC3HQ6NTF7 200 aaKnown RBP11.82□□□□□ -0.52
VCL-204ENST00000472585 ZKSCAN4Q969J2 545 aaPredicted RBP11.82□□□□□ -0.52
VCL-204ENST00000472585 TRIM47Q96LD4 638 aa11.82□□□□□ -0.52
VCL-204ENST00000472585 ZCCHC17Q9NP64 241 aaKnown RBP11.82□□□□□ -0.52
VCL-204ENST00000472585 SPDYE5A6NIY4 337 aa11.81□□□□□ -0.52
VCL-204ENST00000472585 IRF6O14896 467 aa11.81□□□□□ -0.52
VCL-204ENST00000472585 FARP2O94887 1054 aaPredicted RBP11.81□□□□□ -0.52
VCL-204ENST00000472585 FMNL1O95466 1100 aaPredicted RBP11.81□□□□□ -0.52
VCL-204ENST00000472585 PSMC4P43686 418 aa11.81□□□□□ -0.52
VCL-204ENST00000472585 WDR63Q8IWG1 891 aa11.81□□□□□ -0.52
VCL-204ENST00000472585 VGLL2Q8N8G2 317 aa11.81□□□□□ -0.52
VCL-204ENST00000472585 LRCH3Q96II8 777 aa11.81□□□□□ -0.52
VCL-204ENST00000472585 SRRDQ9UH36 339 aa11.81□□□□□ -0.52
VCL-204ENST00000472585 SOX1O00570 391 aaPredicted RBP11.8□□□□□ -0.52
VCL-204ENST00000472585 BCAMP50895 628 aa11.8□□□□□ -0.52
VCL-204ENST00000472585 SNAPC2Q13487 334 aa11.8□□□□□ -0.52
VCL-204ENST00000472585 MOGSQ13724 837 aa11.8□□□□□ -0.52
VCL-204ENST00000472585 TAF7LQ5H9L4 462 aa11.8□□□□□ -0.52
VCL-204ENST00000472585 ERO1BQ86YB8 467 aa11.8□□□□□ -0.52
VCL-204ENST00000472585 ANKRD44Q8N8A2 993 aa11.8□□□□□ -0.52
VCL-204ENST00000472585 KLHDC4Q8TBB5 520 aa11.8□□□□□ -0.52
VCL-204ENST00000472585 C9orf78Q9NZ63 289 aaPredicted RBP11.8□□□□□ -0.52
VCL-204ENST00000472585 ALDH1L1O75891 902 aa11.79□□□□□ -0.52
VCL-204ENST00000472585 INPP5BP32019 993 aa11.79□□□□□ -0.52
VCL-204ENST00000472585 HDLBPQ00341 1268 aaKnown RBP11.79□□□□□ -0.52
VCL-204ENST00000472585 CHAF1AQ13111 956 aaPredicted RBP11.79□□□□□ -0.52
VCL-204ENST00000472585 C17orf99Q6UX52 265 aa11.79□□□□□ -0.52
VCL-204ENST00000472585 MIGA2Q7L4E1 593 aa11.79□□□□□ -0.52
VCL-204ENST00000472585 UBE2Q1Q7Z7E8 422 aa11.79□□□□□ -0.52
VCL-204ENST00000472585 DEFB123Q8N688 67 aa11.79□□□□□ -0.52
VCL-204ENST00000472585 U2AF1L4Q8WU68 220 aaKnown RBP11.79□□□□□ -0.52
VCL-204ENST00000472585 BICC1Q9H694 974 aaKnown RBP11.79□□□□□ -0.52
VCL-204ENST00000472585 STAP2Q9UGK3 403 aa11.79□□□□□ -0.52
VCL-204ENST00000472585 CPA4Q9UI42 421 aa11.79□□□□□ -0.52
VCL-204ENST00000472585 ARAP2Q8WZ64 1704 aa11.79□□□□□ -0.52
VCL-204ENST00000472585 UTYO14607 1347 aa11.79□□□□□ -0.52
VCL-204ENST00000472585 MYPNQ86TC9 1320 aa11.79□□□□□ -0.52
VCL-204ENST00000472585 C19orf67A6NJJ6 358 aa11.78□□□□□ -0.52
VCL-204ENST00000472585 OSBPP22059 807 aa11.78□□□□□ -0.52
VCL-204ENST00000472585 RABL6Q3YEC7 729 aaPredicted RBP11.78□□□□□ -0.52
VCL-204ENST00000472585 SLC4A10Q6U841 1118 aa11.78□□□□□ -0.52
VCL-204ENST00000472585 ZDHHC15Q96MV8 337 aa11.78□□□□□ -0.52
VCL-204ENST00000472585 WRNIP1Q96S55 665 aa11.78□□□□□ -0.52
VCL-204ENST00000472585 MRIQ9BWK5 157 aa11.78□□□□□ -0.52
VCL-204ENST00000472585 LAMA3Q16787 3333 aa11.78□□□□□ -0.52
VCL-204ENST00000472585 MGAMO43451 1857 aa11.77□□□□□ -0.53
VCL-204ENST00000472585 PDE8BO95263 885 aa11.77□□□□□ -0.53
VCL-204ENST00000472585 TFRCP02786 760 aaKnown RBP11.77□□□□□ -0.53
VCL-204ENST00000472585 CD44P16070 742 aaKnown RBP11.77□□□□□ -0.53
VCL-204ENST00000472585 FGFR2P21802 821 aa11.77□□□□□ -0.53
VCL-204ENST00000472585 GPR153Q6NV75 609 aa11.77□□□□□ -0.53
VCL-204ENST00000472585 HOOK2Q96ED9 719 aa11.77□□□□□ -0.53
VCL-204ENST00000472585 SRCIN1Q9C0H9 1055 aa11.77□□□□□ -0.53
VCL-204ENST00000472585 MROH5Q6ZUA9 1318 aa11.77□□□□□ -0.53
VCL-204ENST00000472585 ADGRA2Q96PE1 1338 aa11.77□□□□□ -0.53
VCL-204ENST00000472585 SGPL1O95470 568 aa11.76□□□□□ -0.53
VCL-204ENST00000472585 SLURP2P0DP57 97 aa11.76□□□□□ -0.53
VCL-204ENST00000472585 CAPN2P17655 700 aa11.76□□□□□ -0.53
VCL-204ENST00000472585 PPIL2Q13356 520 aa11.76□□□□□ -0.53
VCL-204ENST00000472585 FAM83AQ86UY5 434 aa11.76□□□□□ -0.53
VCL-204ENST00000472585 ZFPM1Q8IX07 1006 aa11.76□□□□□ -0.53
VCL-204ENST00000472585 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.76□□□□□ -0.53
VCL-204ENST00000472585 SLAIN1Q8ND83 568 aa11.76□□□□□ -0.53
VCL-204ENST00000472585 TEKT1Q969V4 418 aa11.76□□□□□ -0.53
VCL-204ENST00000472585 ZNF112Q9UJU3 913 aa11.76□□□□□ -0.53
VCL-204ENST00000472585 STXBP5LQ9Y2K9 1186 aa11.76□□□□□ -0.53
VCL-204ENST00000472585 AK9Q5TCS8 1911 aa11.76□□□□□ -0.53
VCL-204ENST00000472585 PDHXO00330 501 aa11.75□□□□□ -0.53
VCL-204ENST00000472585 RFX5P48382 616 aaPredicted RBP11.75□□□□□ -0.53
VCL-204ENST00000472585 FCGRTP55899 365 aa11.75□□□□□ -0.53
VCL-204ENST00000472585 NFIAQ12857 509 aa11.75□□□□□ -0.53
VCL-204ENST00000472585 METTL24Q5JXM2 366 aa11.75□□□□□ -0.53
VCL-204ENST00000472585 FKBP1CQ5VVH2 108 aa11.75□□□□□ -0.53
VCL-204ENST00000472585 GPAT2Q6NUI2 795 aa11.75□□□□□ -0.53
VCL-204ENST00000472585 HHIPL2Q6UWX4 724 aa11.75□□□□□ -0.53
VCL-204ENST00000472585 ANKRD23Q86SG2 305 aa11.75□□□□□ -0.53
VCL-204ENST00000472585 USP44Q9H0E7 712 aa11.75□□□□□ -0.53
VCL-204ENST00000472585 UNC93B1Q9H1C4 597 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms