RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 LEKR1Q6ZMV7 388 aa9.69□□□□□ -0.86
CD47-204ENST00000471694 TMX1Q9H3N1 280 aa9.69□□□□□ -0.86
CD47-204ENST00000471694 ARMT1Q9H993 441 aa9.69□□□□□ -0.86
CD47-204ENST00000471694 CASQ1P31415 396 aa9.68□□□□□ -0.86
CD47-204ENST00000471694 RBM6P78332 1123 aaKnown RBP9.68□□□□□ -0.86
CD47-204ENST00000471694 ZNF569Q5MCW4 686 aa9.68□□□□□ -0.86
CD47-204ENST00000471694 PLIN2Q99541 437 aa9.68□□□□□ -0.86
CD47-204ENST00000471694 ZHX1Q9UKY1 873 aaPredicted RBP9.68□□□□□ -0.86
CD47-204ENST00000471694 ZNF790Q6PG37 636 aa9.68□□□□□ -0.86
CD47-204ENST00000471694 CDC37L1Q7L3B6 337 aa9.68□□□□□ -0.86
CD47-204ENST00000471694 COA7Q96BR5 231 aa9.68□□□□□ -0.86
CD47-204ENST00000471694 APOL6Q9BWW8 343 aa9.68□□□□□ -0.86
CD47-204ENST00000471694 RTEL1Q9NZ71 1219 aa9.68□□□□□ -0.86
CD47-204ENST00000471694 ZSCAN20P17040 1043 aaPredicted RBP9.68□□□□□ -0.86
CD47-204ENST00000471694 EN1Q05925 392 aaPredicted RBP9.68□□□□□ -0.86
CD47-204ENST00000471694 LETM2Q2VYF4 491 aa9.68□□□□□ -0.86
CD47-204ENST00000471694 DCAF17Q5H9S7 520 aaPredicted RBP9.68□□□□□ -0.86
CD47-204ENST00000471694 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.68□□□□□ -0.86
CD47-204ENST00000471694 RHPN1Q8TCX5 695 aa9.68□□□□□ -0.86
CD47-204ENST00000471694 AGTPBP1Q9UPW5 1226 aa9.68□□□□□ -0.86
CD47-204ENST00000471694 MYL3P08590 195 aa9.68□□□□□ -0.86
CD47-204ENST00000471694 R3HDM1Q15032 1099 aaKnown RBP9.68□□□□□ -0.86
CD47-204ENST00000471694 BICC1Q9H694 974 aaKnown RBP9.68□□□□□ -0.86
CD47-204ENST00000471694 ARPP19P56211 112 aa9.68□□□□□ -0.86
CD47-204ENST00000471694 UIMC1Q96RL1 719 aa9.68□□□□□ -0.86
CD47-204ENST00000471694 EIF3JO75822 258 aaKnown RBP9.67□□□□□ -0.86
CD47-204ENST00000471694 TMOD1P28289 359 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 CEP135Q66GS9 1140 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 OTUD6AQ7L8S5 288 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 TTLL6Q8N841 843 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 RAET1EQ8TD07 263 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 SLC52A2Q9HAB3 445 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 FNDC3AQ9Y2H6 1198 aaKnown RBP9.67□□□□□ -0.86
CD47-204ENST00000471694 CCNT1O60563 726 aaKnown RBP9.67□□□□□ -0.86
CD47-204ENST00000471694 SERPINB2P05120 415 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 HLTFQ14527 1009 aaKnown RBP eCLIP9.67□□□□□ -0.86
CD47-204ENST00000471694 KIAA0753Q2KHM9 967 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 CIAPIN1Q6FI81 312 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 C4orf50Q6ZRC1 276 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 EYA1Q99502 592 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 IQCGQ9H095 443 aaKnown RBP9.67□□□□□ -0.86
CD47-204ENST00000471694 POLIQ9UNA4 740 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 LIMCH1Q9UPQ0 1083 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 GSE1Q14687 1217 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 KIAA1524Q8TCG1 905 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 XPAP23025 273 aaPredicted RBP9.67□□□□□ -0.86
CD47-204ENST00000471694 GJB2P29033 226 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 BCAMP50895 628 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 CWC15Q9P013 229 aaKnown RBP9.67□□□□□ -0.86
CD47-204ENST00000471694 SERPINA10Q9UK55 444 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 SLFN5Q08AF3 891 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 RTKN2Q8IZC4 609 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 PNMA3Q9UL41 463 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 TTLL3Q9Y4R7 772 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 DDX12PQ92771 950 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 ADPGKQ9BRR6 497 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 ITSN2Q9NZM3 1697 aa9.67□□□□□ -0.86
CD47-204ENST00000471694 E7EVH7 732 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 TRAK2O60296 914 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 P4HA1P13674 534 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 DTHD1Q6ZMT9 781 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 TTLL7Q6ZT98 887 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 CCDC65Q8IXS2 484 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 SCAND2PQ9GZW5 306 aaPredicted RBP9.66□□□□□ -0.86
CD47-204ENST00000471694 DBNDD1Q9H9R9 158 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 PFDN4Q9NQP4 134 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 CLIP2Q9UDT6 1046 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 TMEM94Q12767 1356 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 ZFYVE16Q7Z3T8 1539 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 RPS8P62241 208 aaKnown RBP9.66□□□□□ -0.86
CD47-204ENST00000471694 KIFAP3Q92845 792 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 A0A1W2PRG0 241 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 TYW5A2RUC4 315 aaKnown RBP9.66□□□□□ -0.86
CD47-204ENST00000471694 RNF187Q5TA31 235 aaPredicted RBP9.66□□□□□ -0.86
CD47-204ENST00000471694 CCDC102BQ68D86 513 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 DEPTORQ8TB45 409 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 CCDC102AQ96A19 550 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 NOX5Q96PH1 765 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 LMCD1Q9NZU5 365 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 ZWINTO95229 277 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 GEN1Q17RS7 908 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 CERKLQ49MI3 558 aaPredicted RBP9.66□□□□□ -0.86
CD47-204ENST00000471694 CGNQ9P2M7 1197 aaKnown RBP9.66□□□□□ -0.86
CD47-204ENST00000471694 KCNH4Q9UQ05 1017 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 ATF7P17544 494 aaPredicted RBP9.66□□□□□ -0.86
CD47-204ENST00000471694 ELF1P32519 619 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 LINS1Q8NG48 757 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 NAA15Q9BXJ9 866 aaKnown RBP9.66□□□□□ -0.86
CD47-204ENST00000471694 ANGEL1Q9UNK9 670 aaKnown RBP9.66□□□□□ -0.86
CD47-204ENST00000471694 AKT3Q9Y243 479 aa9.66□□□□□ -0.86
CD47-204ENST00000471694 ZNF335Q9H4Z2 1342 aaPredicted RBP9.66□□□□□ -0.86
CD47-204ENST00000471694 M0R2C6 588 aa9.65□□□□□ -0.86
CD47-204ENST00000471694 EPB41P11171 864 aaKnown RBP9.65□□□□□ -0.86
CD47-204ENST00000471694 PSMC4P43686 418 aa9.65□□□□□ -0.86
CD47-204ENST00000471694 SPECC1Q5M775 1068 aa9.65□□□□□ -0.86
CD47-204ENST00000471694 ZBTB8OSQ8IWT0 167 aa9.65□□□□□ -0.86
CD47-204ENST00000471694 PARD3BQ8TEW8 1205 aa9.65□□□□□ -0.86
CD47-204ENST00000471694 BRF1Q92994 677 aa9.65□□□□□ -0.86
CD47-204ENST00000471694 STK10O94804 968 aaKnown RBP9.65□□□□□ -0.86
CD47-204ENST00000471694 FAM160B1Q5W0V3 765 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms