RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 ICMTO60725 284 aa2.87□□□□□ -1.95
UBXN4-207ENST00000471246 PHACTR2O75167 634 aa2.87□□□□□ -1.95
UBXN4-207ENST00000471246 TNFRSF21O75509 655 aa2.87□□□□□ -1.95
UBXN4-207ENST00000471246 PTPRAP18433 802 aa2.87□□□□□ -1.95
UBXN4-207ENST00000471246 EPHA1P21709 976 aa2.87□□□□□ -1.95
UBXN4-207ENST00000471246 CES1P23141 567 aa2.87□□□□□ -1.95
UBXN4-207ENST00000471246 CDC27P30260 824 aa2.87□□□□□ -1.95
UBXN4-207ENST00000471246 USP5P45974 858 aa2.87□□□□□ -1.95
UBXN4-207ENST00000471246 EHHADHQ08426 723 aa2.87□□□□□ -1.95
UBXN4-207ENST00000471246 KCNA10Q16322 511 aa2.87□□□□□ -1.95
UBXN4-207ENST00000471246 ZXDCQ2QGD7 858 aaPredicted RBP2.87□□□□□ -1.95
UBXN4-207ENST00000471246 CIAPIN1Q6FI81 312 aa2.87□□□□□ -1.95
UBXN4-207ENST00000471246 CDPF1Q6NVV7 123 aa2.87□□□□□ -1.95
UBXN4-207ENST00000471246 FAM117BQ6P1L5 589 aa2.87□□□□□ -1.95
UBXN4-207ENST00000471246 PI4K2BQ8TCG2 481 aa2.87□□□□□ -1.95
UBXN4-207ENST00000471246 FBLIM1Q8WUP2 373 aa2.87□□□□□ -1.95
UBXN4-207ENST00000471246 HHIPQ96QV1 700 aa2.87□□□□□ -1.95
UBXN4-207ENST00000471246 PBX4Q9BYU1 374 aa2.87□□□□□ -1.95
UBXN4-207ENST00000471246 CCDC87Q9NVE4 849 aa2.87□□□□□ -1.95
UBXN4-207ENST00000471246 SALL4Q9UJQ4 1053 aa2.87□□□□□ -1.95
UBXN4-207ENST00000471246 FOXD3Q9UJU5 478 aaPredicted RBP2.87□□□□□ -1.95
UBXN4-207ENST00000471246 NFKBIEO00221 500 aa2.86□□□□□ -1.95
UBXN4-207ENST00000471246 EREGO14944 169 aa2.86□□□□□ -1.95
UBXN4-207ENST00000471246 TRPA1O75762 1119 aa2.86□□□□□ -1.95
UBXN4-207ENST00000471246 CD96P40200 585 aa2.86□□□□□ -1.95
UBXN4-207ENST00000471246 NFIXQ14938 502 aa2.86□□□□□ -1.95
UBXN4-207ENST00000471246 DUSP27Q5VZP5 1158 aa2.86□□□□□ -1.95
UBXN4-207ENST00000471246 ZNF765Q7L2R6 523 aa2.86□□□□□ -1.95
UBXN4-207ENST00000471246 TXNDC2Q86VQ3 553 aa2.86□□□□□ -1.95
UBXN4-207ENST00000471246 BORCS6Q96GS4 357 aa2.86□□□□□ -1.95
UBXN4-207ENST00000471246 RUSC1Q9BVN2 902 aa2.86□□□□□ -1.95
UBXN4-207ENST00000471246 ZCCHC4Q9H5U6 513 aa2.86□□□□□ -1.95
UBXN4-207ENST00000471246 SH2B1Q9NRF2 756 aaPredicted RBP2.86□□□□□ -1.95
UBXN4-207ENST00000471246 DZANK1Q9NVP4 752 aa2.86□□□□□ -1.95
UBXN4-207ENST00000471246 AMOTL2Q9Y2J4 779 aa2.86□□□□□ -1.95
UBXN4-207ENST00000471246 FAM177BA6PVY3 158 aa2.85□□□□□ -1.95
UBXN4-207ENST00000471246 H3BRJ5 948 aa2.85□□□□□ -1.95
UBXN4-207ENST00000471246 PDE2AO00408 941 aaPredicted RBP2.85□□□□□ -1.95
UBXN4-207ENST00000471246 EDN3P14138 238 aa2.85□□□□□ -1.95
UBXN4-207ENST00000471246 ARHGAP4P98171 946 aa2.85□□□□□ -1.95
UBXN4-207ENST00000471246 TMEM102Q8N9M5 508 aaPredicted RBP2.85□□□□□ -1.95
UBXN4-207ENST00000471246 CXorf38Q8TB03 319 aa2.85□□□□□ -1.95
UBXN4-207ENST00000471246 POP1Q99575 1024 aaKnown RBP2.85□□□□□ -1.95
UBXN4-207ENST00000471246 OSMRQ99650 979 aa2.85□□□□□ -1.95
UBXN4-207ENST00000471246 ZKSCAN3Q9BRR0 538 aa2.85□□□□□ -1.95
UBXN4-207ENST00000471246 LATS2Q9NRM7 1088 aa2.85□□□□□ -1.95
UBXN4-207ENST00000471246 BRPF3Q9ULD4 1205 aa2.85□□□□□ -1.95
UBXN4-207ENST00000471246 SOX13Q9UN79 622 aa2.85□□□□□ -1.95
UBXN4-207ENST00000471246 GPR182O15218 404 aa2.84□□□□□ -1.95
UBXN4-207ENST00000471246 NDUFB5O43674 189 aa2.84□□□□□ -1.95
UBXN4-207ENST00000471246 TIAF1O95411 115 aa2.84□□□□□ -1.95
UBXN4-207ENST00000471246 POLR3DP05423 398 aaPredicted RBP2.84□□□□□ -1.95
UBXN4-207ENST00000471246 BMP7P18075 431 aa2.84□□□□□ -1.95
UBXN4-207ENST00000471246 CABP4P57796 275 aa2.84□□□□□ -1.95
UBXN4-207ENST00000471246 PIP4K2BP78356 416 aa2.84□□□□□ -1.95
UBXN4-207ENST00000471246 PDE4CQ08493 712 aa2.84□□□□□ -1.95
UBXN4-207ENST00000471246 FYB2Q5VWT5 728 aa2.84□□□□□ -1.95
UBXN4-207ENST00000471246 PEAR1Q5VY43 1037 aaPredicted RBP2.84□□□□□ -1.95
UBXN4-207ENST00000471246 ATG14Q6ZNE5 492 aa2.84□□□□□ -1.95
UBXN4-207ENST00000471246 EZH1Q92800 747 aaPredicted RBP2.84□□□□□ -1.95
UBXN4-207ENST00000471246 PMEPA1Q969W9 287 aa2.84□□□□□ -1.95
UBXN4-207ENST00000471246 MISP3Q96FF7 219 aa2.84□□□□□ -1.95
UBXN4-207ENST00000471246 FAM129BQ96TA1 746 aa2.84□□□□□ -1.95
UBXN4-207ENST00000471246 BHLHE41Q9C0J9 482 aaPredicted RBP2.84□□□□□ -1.95
UBXN4-207ENST00000471246 KCNK12Q9HB15 430 aa2.84□□□□□ -1.95
UBXN4-207ENST00000471246 SEC31BQ9NQW1 1179 aa2.84□□□□□ -1.95
UBXN4-207ENST00000471246 SOWAHDA6NJG2 315 aa2.83□□□□□ -1.96
UBXN4-207ENST00000471246 METTL12A8MUP2 240 aa2.83□□□□□ -1.96
UBXN4-207ENST00000471246 NUAK1O60285 661 aa2.83□□□□□ -1.96
UBXN4-207ENST00000471246 TMEM253P0C7T8 217 aa2.83□□□□□ -1.96
UBXN4-207ENST00000471246 NLRP12P59046 1061 aa2.83□□□□□ -1.96
UBXN4-207ENST00000471246 ORC1Q13415 861 aa2.83□□□□□ -1.96
UBXN4-207ENST00000471246 USPL1Q5W0Q7 1092 aa2.83□□□□□ -1.96
UBXN4-207ENST00000471246 HGSNATQ68CP4 663 aa2.83□□□□□ -1.96
UBXN4-207ENST00000471246 C12orf50Q8NA57 414 aaPredicted RBP2.83□□□□□ -1.96
UBXN4-207ENST00000471246 FBXO15Q8NCQ5 510 aaPredicted RBP2.83□□□□□ -1.96
UBXN4-207ENST00000471246 ASAP3Q8TDY4 903 aa2.83□□□□□ -1.96
UBXN4-207ENST00000471246 SLC7A3Q8WY07 619 aa2.83□□□□□ -1.96
UBXN4-207ENST00000471246 BSNDQ8WZ55 320 aa2.83□□□□□ -1.96
UBXN4-207ENST00000471246 WNT8BQ93098 351 aa2.83□□□□□ -1.96
UBXN4-207ENST00000471246 NXPE3Q969Y0 559 aa2.83□□□□□ -1.96
UBXN4-207ENST00000471246 KCNC2Q96PR1 638 aa2.83□□□□□ -1.96
UBXN4-207ENST00000471246 ZFYVE28Q9HCC9 887 aa2.83□□□□□ -1.96
UBXN4-207ENST00000471246 RTEL1Q9NZ71 1219 aa2.83□□□□□ -1.96
UBXN4-207ENST00000471246 SMG5Q9UPR3 1016 aaKnown RBP2.83□□□□□ -1.96
UBXN4-207ENST00000471246 CNTNAP4Q9C0A0 1308 aa2.83□□□□□ -1.96
UBXN4-207ENST00000471246 A0A1W2PP55 124 aa2.82□□□□□ -1.96
UBXN4-207ENST00000471246 BRD1O95696 1058 aa2.82□□□□□ -1.96
UBXN4-207ENST00000471246 MED14OSP0DP75 135 aa2.82□□□□□ -1.96
UBXN4-207ENST00000471246 DRD2P14416 443 aa2.82□□□□□ -1.96
UBXN4-207ENST00000471246 INSRRP14616 1297 aa2.82□□□□□ -1.96
UBXN4-207ENST00000471246 USP11P51784 963 aa2.82□□□□□ -1.96
UBXN4-207ENST00000471246 PDE3BQ13370 1112 aa2.82□□□□□ -1.96
UBXN4-207ENST00000471246 IKBKEQ14164 716 aa2.82□□□□□ -1.96
UBXN4-207ENST00000471246 PUM1Q14671 1186 aaKnown RBP eCLIP2.82□□□□□ -1.964e-12■□□□□ 10.5
UBXN4-207ENST00000471246 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
UBXN4-207ENST00000471246 VN1R5Q7Z5H4 357 aa2.82□□□□□ -1.96
UBXN4-207ENST00000471246 GALNT12Q8IXK2 581 aa2.82□□□□□ -1.96
UBXN4-207ENST00000471246 PLD6Q8N2A8 252 aaKnown RBP2.82□□□□□ -1.96
UBXN4-207ENST00000471246 SMG8Q8ND04 991 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms