RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 SLC38A3Q99624 504 aa4.83□□□□□ -1.64
UBXN4-206ENST00000470687 GZF1Q9H116 711 aaPredicted RBP4.83□□□□□ -1.64
UBXN4-206ENST00000470687 MBNL3Q9NUK0 354 aaKnown RBP4.83□□□□□ -1.64
UBXN4-206ENST00000470687 ADAMTS6Q9UKP5 1117 aa4.83□□□□□ -1.64
UBXN4-206ENST00000470687 EREGO14944 169 aa4.82□□□□□ -1.64
UBXN4-206ENST00000470687 DYNC1LI2O43237 492 aaPredicted RBP4.82□□□□□ -1.64
UBXN4-206ENST00000470687 EIF4EBP3O60516 100 aaPredicted RBP4.82□□□□□ -1.64
UBXN4-206ENST00000470687 ZNF865P0CJ78 1059 aaPredicted RBP4.82□□□□□ -1.64
UBXN4-206ENST00000470687 CD8BP10966 210 aa4.82□□□□□ -1.64
UBXN4-206ENST00000470687 OGFOD3Q6PK18 319 aa4.82□□□□□ -1.64
UBXN4-206ENST00000470687 DYMQ7RTS9 669 aa4.82□□□□□ -1.64
UBXN4-206ENST00000470687 GSX1Q9H4S2 264 aaPredicted RBP4.82□□□□□ -1.64
UBXN4-206ENST00000470687 EGFL7Q9UHF1 273 aa4.82□□□□□ -1.64
UBXN4-206ENST00000470687 PDGFAP04085 211 aa4.81□□□□□ -1.64
UBXN4-206ENST00000470687 EDN3P14138 238 aa4.81□□□□□ -1.64
UBXN4-206ENST00000470687 PCSK2P16519 638 aa4.81□□□□□ -1.64
UBXN4-206ENST00000470687 FKBP4Q02790 459 aaKnown RBP eCLIP4.81□□□□□ -1.64
UBXN4-206ENST00000470687 DNM1Q05193 864 aaKnown RBP4.81□□□□□ -1.64
UBXN4-206ENST00000470687 C8orf34Q49A92 452 aa4.81□□□□□ -1.64
UBXN4-206ENST00000470687 AKAP4Q5JQC9 854 aa4.81□□□□□ -1.64
UBXN4-206ENST00000470687 PLD6Q8N2A8 252 aaKnown RBP4.81□□□□□ -1.64
UBXN4-206ENST00000470687 LRRN4CLQ8ND94 238 aa4.81□□□□□ -1.64
UBXN4-206ENST00000470687 BHLHE22Q8NFJ8 381 aaPredicted RBP4.81□□□□□ -1.64
UBXN4-206ENST00000470687 FAM84AQ96KN4 292 aa4.81□□□□□ -1.64
UBXN4-206ENST00000470687 SETDB2Q96T68 719 aa4.81□□□□□ -1.64
UBXN4-206ENST00000470687 H3BRB1 525 aa4.8□□□□□ -1.64
UBXN4-206ENST00000470687 GPR182O15218 404 aa4.8□□□□□ -1.64
UBXN4-206ENST00000470687 MAOBP27338 520 aa4.8□□□□□ -1.64
UBXN4-206ENST00000470687 ASPAP45381 313 aa4.8□□□□□ -1.64
UBXN4-206ENST00000470687 NETO1Q8TDF5 533 aa4.8□□□□□ -1.64
UBXN4-206ENST00000470687 TUT1Q9H6E5 874 aaKnown RBP4.8□□□□□ -1.64
UBXN4-206ENST00000470687 LATS2Q9NRM7 1088 aa4.8□□□□□ -1.64
UBXN4-206ENST00000470687 AP4E1Q9UPM8 1137 aa4.8□□□□□ -1.64
UBXN4-206ENST00000470687 DAGLAQ9Y4D2 1042 aa4.8□□□□□ -1.64
UBXN4-206ENST00000470687 METTL12A8MUP2 240 aa4.79□□□□□ -1.64
UBXN4-206ENST00000470687 ABL1P00519 1130 aa4.79□□□□□ -1.64
UBXN4-206ENST00000470687 MZF1P28698 734 aaPredicted RBP4.79□□□□□ -1.64
UBXN4-206ENST00000470687 CD96P40200 585 aa4.79□□□□□ -1.64
UBXN4-206ENST00000470687 DSC3Q14574 896 aa4.79□□□□□ -1.64
UBXN4-206ENST00000470687 POU4F3Q15319 338 aa4.79□□□□□ -1.64
UBXN4-206ENST00000470687 CYP27C1Q4G0S4 372 aa4.79□□□□□ -1.64
UBXN4-206ENST00000470687 HP1BP3Q5SSJ5 553 aaPredicted RBP4.79□□□□□ -1.64
UBXN4-206ENST00000470687 PEAR1Q5VY43 1037 aaPredicted RBP4.79□□□□□ -1.64
UBXN4-206ENST00000470687 SND1Q7KZF4 910 aaKnown RBP eCLIP4.79□□□□□ -1.64
UBXN4-206ENST00000470687 FAM181AQ8N9Y4 354 aa4.79□□□□□ -1.64
UBXN4-206ENST00000470687 RGS22Q8NE09 1264 aa4.79□□□□□ -1.64
UBXN4-206ENST00000470687 PI4K2BQ8TCG2 481 aa4.79□□□□□ -1.64
UBXN4-206ENST00000470687 FAM129BQ96TA1 746 aa4.79□□□□□ -1.64
UBXN4-206ENST00000470687 KRTAP17-1Q9BYP8 105 aa4.79□□□□□ -1.64
UBXN4-206ENST00000470687 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.79□□□□□ -1.64
UBXN4-206ENST00000470687 POLIQ9UNA4 740 aa4.79□□□□□ -1.64
UBXN4-206ENST00000470687 NCANO14594 1321 aa4.78□□□□□ -1.64
UBXN4-206ENST00000470687 LRRC10BA6NIK2 292 aa4.78□□□□□ -1.64
UBXN4-206ENST00000470687 PHACTR2O75167 634 aa4.78□□□□□ -1.64
UBXN4-206ENST00000470687 TNFRSF21O75509 655 aa4.78□□□□□ -1.64
UBXN4-206ENST00000470687 CYP11A1P05108 521 aa4.78□□□□□ -1.64
UBXN4-206ENST00000470687 PRKCQQ04759 706 aa4.78□□□□□ -1.64
UBXN4-206ENST00000470687 PCDH1Q08174 1060 aa4.78□□□□□ -1.64
UBXN4-206ENST00000470687 ZNF423Q2M1K9 1284 aa4.78□□□□□ -1.64
UBXN4-206ENST00000470687 LILRA6Q6PI73 481 aa4.78□□□□□ -1.64
UBXN4-206ENST00000470687 LCNL1Q6ZST4 164 aa4.78□□□□□ -1.64
UBXN4-206ENST00000470687 C1QL4Q86Z23 238 aa4.78□□□□□ -1.64
UBXN4-206ENST00000470687 GJD3Q8N144 294 aa4.78□□□□□ -1.64
UBXN4-206ENST00000470687 TTC16Q8NEE8 873 aa4.78□□□□□ -1.64
UBXN4-206ENST00000470687 SNX29Q8TEQ0 813 aa4.78□□□□□ -1.64
UBXN4-206ENST00000470687 TOX2Q96NM4 488 aa4.78□□□□□ -1.64
UBXN4-206ENST00000470687 LGR6Q9HBX8 967 aa4.78□□□□□ -1.64
UBXN4-206ENST00000470687 VAV3Q9UKW4 847 aa4.78□□□□□ -1.64
UBXN4-206ENST00000470687 U3KQE9 123 aa4.78□□□□□ -1.64
UBXN4-206ENST00000470687 PRRG2O14669 202 aa4.77□□□□□ -1.65
UBXN4-206ENST00000470687 ECEL1O95672 775 aa4.77□□□□□ -1.65
UBXN4-206ENST00000470687 CFPP27918 469 aa4.77□□□□□ -1.65
UBXN4-206ENST00000470687 USPL1Q5W0Q7 1092 aa4.77□□□□□ -1.65
UBXN4-206ENST00000470687 NPAS4Q8IUM7 802 aa4.77□□□□□ -1.65
UBXN4-206ENST00000470687 FLAD1Q8NFF5 587 aa4.77□□□□□ -1.65
UBXN4-206ENST00000470687 TRIM56Q9BRZ2 755 aaKnown RBP4.77□□□□□ -1.65
UBXN4-206ENST00000470687 KRTAP9-3Q9BYQ3 159 aa4.77□□□□□ -1.65
UBXN4-206ENST00000470687 CLEC4MQ9H2X3 399 aaPredicted RBP4.77□□□□□ -1.65
UBXN4-206ENST00000470687 RAD18Q9NS91 495 aa4.77□□□□□ -1.65
UBXN4-206ENST00000470687 FOXD3Q9UJU5 478 aaPredicted RBP4.77□□□□□ -1.65
UBXN4-206ENST00000470687 ZNF503-AS2A6NEH8 195 aa4.76□□□□□ -1.65
UBXN4-206ENST00000470687 TSPAN15O95858 294 aa4.76□□□□□ -1.65
UBXN4-206ENST00000470687 FAM87AP0C7U9 286 aa4.76□□□□□ -1.65
UBXN4-206ENST00000470687 RAP1GAPP47736 663 aa4.76□□□□□ -1.65
UBXN4-206ENST00000470687 CDK5R2Q13319 367 aa4.76□□□□□ -1.65
UBXN4-206ENST00000470687 LDLRAD1Q5T700 205 aa4.76□□□□□ -1.65
UBXN4-206ENST00000470687 TMC7Q7Z402 723 aa4.76□□□□□ -1.65
UBXN4-206ENST00000470687 ZSWIM9Q86XI8 627 aa4.76□□□□□ -1.65
UBXN4-206ENST00000470687 ZNF428Q96B54 188 aa4.76□□□□□ -1.65
UBXN4-206ENST00000470687 ZFYVE1Q9HBF4 777 aa4.76□□□□□ -1.65
UBXN4-206ENST00000470687 DCAF1Q9Y4B6 1507 aa4.76□□□□□ -1.65
UBXN4-206ENST00000470687 SHROOM4Q9ULL8 1493 aa4.75□□□□□ -1.65
UBXN4-206ENST00000470687 A0A096LPE4 126 aa4.75□□□□□ -1.65
UBXN4-206ENST00000470687 A0A1W2PPZ6 126 aa4.75□□□□□ -1.65
UBXN4-206ENST00000470687 AOC2O75106 756 aa4.75□□□□□ -1.65
UBXN4-206ENST00000470687 SF3B2Q13435 895 aaKnown RBP4.75□□□□□ -1.65
UBXN4-206ENST00000470687 MLANAQ16655 118 aa4.75□□□□□ -1.65
UBXN4-206ENST00000470687 IFI16Q16666 785 aaKnown RBP4.75□□□□□ -1.65
UBXN4-206ENST00000470687 FBXO33Q7Z6M2 555 aa4.75□□□□□ -1.65
UBXN4-206ENST00000470687 LRRC56Q8IYG6 542 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms