RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 GJD3Q8N144 294 aa9.77□□□□□ -0.85
PTP4A1-202ENST00000470661 C1orf127Q8N9H9 656 aa9.77□□□□□ -0.85
PTP4A1-202ENST00000470661 KANSL3Q9P2N6 904 aa9.77□□□□□ -0.85
PTP4A1-202ENST00000470661 SPATA31E1Q6ZUB1 1445 aa9.76□□□□□ -0.85
PTP4A1-202ENST00000470661 USP5P45974 858 aa9.76□□□□□ -0.85
PTP4A1-202ENST00000470661 AFF1P51825 1210 aaKnown RBP9.76□□□□□ -0.85
PTP4A1-202ENST00000470661 HYAL2Q12891 473 aa9.76□□□□□ -0.85
PTP4A1-202ENST00000470661 SAFB2Q14151 953 aaKnown RBP eCLIP9.76□□□□□ -0.85
PTP4A1-202ENST00000470661 XKR5Q6UX68 686 aa9.76□□□□□ -0.85
PTP4A1-202ENST00000470661 TMEM151AQ8N4L1 468 aa9.76□□□□□ -0.85
PTP4A1-202ENST00000470661 BIN2Q9UBW5 565 aaPredicted RBP9.76□□□□□ -0.85
PTP4A1-202ENST00000470661 FOXD3Q9UJU5 478 aaPredicted RBP9.76□□□□□ -0.85
PTP4A1-202ENST00000470661 NKTRP30414 1462 aaKnown RBP9.76□□□□□ -0.85
PTP4A1-202ENST00000470661 RPGRIP1LQ68CZ1 1315 aa9.76□□□□□ -0.85
PTP4A1-202ENST00000470661 FAM135BQ49AJ0 1406 aa9.75□□□□□ -0.85
PTP4A1-202ENST00000470661 PIK3R2O00459 728 aa9.75□□□□□ -0.85
PTP4A1-202ENST00000470661 GHRHP01286 108 aa9.75□□□□□ -0.85
PTP4A1-202ENST00000470661 KCNA1Q09470 495 aa9.75□□□□□ -0.85
PTP4A1-202ENST00000470661 BRINP3Q76B58 766 aa9.75□□□□□ -0.85
PTP4A1-202ENST00000470661 PLD4Q96BZ4 506 aa9.75□□□□□ -0.85
PTP4A1-202ENST00000470661 DCAF5Q96JK2 942 aa9.75□□□□□ -0.85
PTP4A1-202ENST00000470661 ORAI2Q96SN7 254 aa9.75□□□□□ -0.85
PTP4A1-202ENST00000470661 CHRDQ9H2X0 955 aa9.75□□□□□ -0.85
PTP4A1-202ENST00000470661 FRRS1LQ9P0K9 344 aa9.75□□□□□ -0.85
PTP4A1-202ENST00000470661 RGS17Q9UGC6 210 aaPredicted RBP9.75□□□□□ -0.85
PTP4A1-202ENST00000470661 SETBP1Q9Y6X0 1596 aa9.75□□□□□ -0.85
PTP4A1-202ENST00000470661 PLEKHH1Q9ULM0 1364 aa9.75□□□□□ -0.85
PTP4A1-202ENST00000470661 ROBO1Q9Y6N7 1651 aa9.74□□□□□ -0.85
PTP4A1-202ENST00000470661 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.74□□□□□ -0.85
PTP4A1-202ENST00000470661 FAM229AH3BQW9 127 aa9.74□□□□□ -0.85
PTP4A1-202ENST00000470661 NDUFB5O43674 189 aa9.74□□□□□ -0.85
PTP4A1-202ENST00000470661 TNFRSF21O75509 655 aa9.74□□□□□ -0.85
PTP4A1-202ENST00000470661 PDIA4P13667 645 aaKnown RBP9.74□□□□□ -0.85
PTP4A1-202ENST00000470661 ATP11AP98196 1134 aa9.74□□□□□ -0.85
PTP4A1-202ENST00000470661 NOP53Q9NZM5 478 aaKnown RBP9.74□□□□□ -0.85
PTP4A1-202ENST00000470661 PIK3R4Q99570 1358 aa9.74□□□□□ -0.85
PTP4A1-202ENST00000470661 ANKRD30BQ9BXX2 1392 aa9.74□□□□□ -0.85
PTP4A1-202ENST00000470661 CES1P23141 567 aa9.73□□□□□ -0.85
PTP4A1-202ENST00000470661 XPCQ01831 940 aaPredicted RBP9.73□□□□□ -0.85
PTP4A1-202ENST00000470661 EHHADHQ08426 723 aa9.73□□□□□ -0.85
PTP4A1-202ENST00000470661 GRIK5Q16478 980 aa9.73□□□□□ -0.85
PTP4A1-202ENST00000470661 NCAPG2Q86XI2 1143 aa9.73□□□□□ -0.85
PTP4A1-202ENST00000470661 DCAF11Q8TEB1 546 aa9.73□□□□□ -0.85
PTP4A1-202ENST00000470661 PPLO60437 1756 aa9.73□□□□□ -0.85
PTP4A1-202ENST00000470661 MED1Q15648 1581 aaPredicted RBP9.72□□□□□ -0.85
PTP4A1-202ENST00000470661 PHACTR2O75167 634 aa9.72□□□□□ -0.85
PTP4A1-202ENST00000470661 AEBP1Q8IUX7 1158 aa9.72□□□□□ -0.85
PTP4A1-202ENST00000470661 SIN3AQ96ST3 1273 aa9.72□□□□□ -0.85
PTP4A1-202ENST00000470661 RBSNQ9H1K0 784 aa9.72□□□□□ -0.85
PTP4A1-202ENST00000470661 DIP2AQ14689 1571 aa9.71□□□□□ -0.85
PTP4A1-202ENST00000470661 XRN1Q8IZH2 1706 aaKnown RBP9.71□□□□□ -0.85
PTP4A1-202ENST00000470661 EREGO14944 169 aa9.71□□□□□ -0.86
PTP4A1-202ENST00000470661 KIF4AO95239 1232 aa9.71□□□□□ -0.86
PTP4A1-202ENST00000470661 ACPPP15309 386 aa9.71□□□□□ -0.86
PTP4A1-202ENST00000470661 TRAPPC3LQ5T215 181 aa9.71□□□□□ -0.86
PTP4A1-202ENST00000470661 GDF6Q6KF10 455 aaPredicted RBP9.71□□□□□ -0.86
PTP4A1-202ENST00000470661 KCTD17Q8N5Z5 321 aa9.71□□□□□ -0.86
PTP4A1-202ENST00000470661 SNX29Q8TEQ0 813 aa9.71□□□□□ -0.86
PTP4A1-202ENST00000470661 SPACA7Q96KW9 195 aa9.71□□□□□ -0.86
PTP4A1-202ENST00000470661 RASSF4Q9H2L5 321 aa9.71□□□□□ -0.86
PTP4A1-202ENST00000470661 C14orf93Q9H972 538 aaKnown RBP9.71□□□□□ -0.86
PTP4A1-202ENST00000470661 TRIM33Q9UPN9 1127 aa9.71□□□□□ -0.86
PTP4A1-202ENST00000470661 KRBA1A5PL33 1030 aa9.7□□□□□ -0.86
PTP4A1-202ENST00000470661 DMRTC2Q8IXT2 367 aaPredicted RBP9.7□□□□□ -0.86
PTP4A1-202ENST00000470661 TMC1Q8TDI8 760 aa9.7□□□□□ -0.86
PTP4A1-202ENST00000470661 TRAK1Q9UPV9 953 aa9.7□□□□□ -0.86
PTP4A1-202ENST00000470661 SETD1AO15047 1707 aaKnown RBP9.7□□□□□ -0.86
PTP4A1-202ENST00000470661 PHLPP1O60346 1717 aa9.69□□□□□ -0.86
PTP4A1-202ENST00000470661 MST1RQ04912 1400 aa9.69□□□□□ -0.86
PTP4A1-202ENST00000470661 DHX57Q6P158 1386 aaKnown RBP9.69□□□□□ -0.86
PTP4A1-202ENST00000470661 ASXL1Q8IXJ9 1541 aa9.69□□□□□ -0.86
PTP4A1-202ENST00000470661 TTC9Q92623 222 aa9.69□□□□□ -0.86
PTP4A1-202ENST00000470661 HIRIP3Q9BW71 556 aaPredicted RBP9.69□□□□□ -0.86
PTP4A1-202ENST00000470661 SALL4Q9UJQ4 1053 aa9.69□□□□□ -0.86
PTP4A1-202ENST00000470661 ADGRL3Q9HAR2 1447 aa9.68□□□□□ -0.86
PTP4A1-202ENST00000470661 NCOA3Q9Y6Q9 1424 aa9.68□□□□□ -0.86
PTP4A1-202ENST00000470661 SPDYE3A6NKU9 549 aa9.68□□□□□ -0.86
PTP4A1-202ENST00000470661 PRRT3Q5FWE3 981 aa9.68□□□□□ -0.86
PTP4A1-202ENST00000470661 CEP135Q66GS9 1140 aa9.68□□□□□ -0.86
PTP4A1-202ENST00000470661 MSL1Q68DK7 614 aa9.68□□□□□ -0.86
PTP4A1-202ENST00000470661 WFDC8Q8IUA0 241 aa9.68□□□□□ -0.86
PTP4A1-202ENST00000470661 CEP120Q8N960 986 aa9.68□□□□□ -0.86
PTP4A1-202ENST00000470661 PRAM1Q96QH2 718 aa9.68□□□□□ -0.86
PTP4A1-202ENST00000470661 FAM129BQ96TA1 746 aa9.68□□□□□ -0.86
PTP4A1-202ENST00000470661 NALCNQ8IZF0 1738 aa9.68□□□□□ -0.86
PTP4A1-202ENST00000470661 PIK3C2GO75747 1445 aa9.67□□□□□ -0.86
PTP4A1-202ENST00000470661 LRPPRCP42704 1394 aaKnown RBP9.67□□□□□ -0.86
PTP4A1-202ENST00000470661 GPR182O15218 404 aa9.67□□□□□ -0.86
PTP4A1-202ENST00000470661 TRPA1O75762 1119 aa9.67□□□□□ -0.86
PTP4A1-202ENST00000470661 POLR3DP05423 398 aaPredicted RBP9.67□□□□□ -0.86
PTP4A1-202ENST00000470661 ADAMTSL4Q6UY14 1074 aa9.67□□□□□ -0.86
PTP4A1-202ENST00000470661 LACRTQ9GZZ8 138 aa9.67□□□□□ -0.86
PTP4A1-202ENST00000470661 C1orf167Q5SNV9 1468 aa9.66□□□□□ -0.86
PTP4A1-202ENST00000470661 YTHDC2Q9H6S0 1430 aaKnown RBP9.66□□□□□ -0.86
PTP4A1-202ENST00000470661 A0A0A0MRY4 1105 aa9.66□□□□□ -0.86
PTP4A1-202ENST00000470661 BAG6P46379 1132 aa9.66□□□□□ -0.86
PTP4A1-202ENST00000470661 TRIM28Q13263 835 aaKnown RBP9.66□□□□□ -0.86
PTP4A1-202ENST00000470661 PDE3BQ13370 1112 aa9.66□□□□□ -0.86
PTP4A1-202ENST00000470661 ORC1Q13415 861 aa9.66□□□□□ -0.86
PTP4A1-202ENST00000470661 MEX3CQ5U5Q3 659 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms