RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 RAB11FIP3O75154 756 aa17.35■□□□□ 0.37
TOP3B-215ENST00000470338 MECOMQ03112 1051 aa17.35■□□□□ 0.37
TOP3B-215ENST00000470338 PRKG1Q13976 671 aa17.35■□□□□ 0.37
TOP3B-215ENST00000470338 TBC1D9Q6ZT07 1266 aa17.35■□□□□ 0.37
TOP3B-215ENST00000470338 DZIP1Q86YF9 867 aaKnown RBP17.35■□□□□ 0.37
TOP3B-215ENST00000470338 RASAL3Q86YV0 1011 aa17.35■□□□□ 0.37
TOP3B-215ENST00000470338 SLF2Q8IX21 1173 aa17.35■□□□□ 0.37
TOP3B-215ENST00000470338 ZNF384Q8TF68 577 aa17.35■□□□□ 0.37
TOP3B-215ENST00000470338 KIF1BPQ96EK5 621 aa17.35■□□□□ 0.37
TOP3B-215ENST00000470338 ANGEL1Q9UNK9 670 aaKnown RBP17.35■□□□□ 0.37
TOP3B-215ENST00000470338 FZD1Q9UP38 647 aa17.35■□□□□ 0.37
TOP3B-215ENST00000470338 UNCXA6NJT0 531 aa17.34■□□□□ 0.37
TOP3B-215ENST00000470338 USP2O75604 605 aaPredicted RBP17.34■□□□□ 0.37
TOP3B-215ENST00000470338 AACSQ86V21 672 aa17.34■□□□□ 0.37
TOP3B-215ENST00000470338 CDAN1Q8IWY9 1227 aa17.34■□□□□ 0.37
TOP3B-215ENST00000470338 AIDAQ96BJ3 306 aa17.34■□□□□ 0.37
TOP3B-215ENST00000470338 NSUN4Q96CB9 384 aaKnown RBP17.34■□□□□ 0.37
TOP3B-215ENST00000470338 IL1RAPL2Q9NP60 686 aa17.34■□□□□ 0.37
TOP3B-215ENST00000470338 KIF23Q02241 960 aaPredicted RBP17.33■□□□□ 0.36
TOP3B-215ENST00000470338 CLASRPQ8N2M8 674 aaKnown RBP17.33■□□□□ 0.36
TOP3B-215ENST00000470338 SNRKQ9NRH2 765 aa17.33■□□□□ 0.36
TOP3B-215ENST00000470338 USP40Q9NVE5 1235 aa17.33■□□□□ 0.36
TOP3B-215ENST00000470338 OTOFQ9HC10 1997 aa17.33■□□□□ 0.36
TOP3B-215ENST00000470338 RPAP1Q9BWH6 1393 aaPredicted RBP17.32■□□□□ 0.36
TOP3B-215ENST00000470338 MROH7-TTC4A0A0A0MT08 1334 aa17.32■□□□□ 0.36
TOP3B-215ENST00000470338 GPR75-ASB3A0A0A6YYF3 556 aa17.32■□□□□ 0.36
TOP3B-215ENST00000470338 IGSF3O75054 1194 aa17.32■□□□□ 0.36
TOP3B-215ENST00000470338 CYP2E1P05181 493 aaPredicted RBP17.32■□□□□ 0.36
TOP3B-215ENST00000470338 CTCFP49711 727 aaPredicted RBP17.32■□□□□ 0.36
TOP3B-215ENST00000470338 FAM151AQ8WW52 585 aa17.32■□□□□ 0.36
TOP3B-215ENST00000470338 BEGAINQ9BUH8 593 aa17.32■□□□□ 0.36
TOP3B-215ENST00000470338 LAMB1P07942 1786 aa17.32■□□□□ 0.36
TOP3B-215ENST00000470338 MAST2Q6P0Q8 1798 aa17.31■□□□□ 0.36
TOP3B-215ENST00000470338 APBB1O00213 710 aa17.31■□□□□ 0.36
TOP3B-215ENST00000470338 LDHCP07864 332 aa17.31■□□□□ 0.36
TOP3B-215ENST00000470338 ZAP70P43403 619 aa17.31■□□□□ 0.36
TOP3B-215ENST00000470338 IREB2P48200 963 aaKnown RBP17.31■□□□□ 0.36
TOP3B-215ENST00000470338 GSTO1P78417 241 aa17.31■□□□□ 0.36
TOP3B-215ENST00000470338 NFIAQ12857 509 aa17.31■□□□□ 0.36
TOP3B-215ENST00000470338 REM2Q8IYK8 340 aaPredicted RBP17.31■□□□□ 0.36
TOP3B-215ENST00000470338 CSRNP1Q96S65 589 aa17.31■□□□□ 0.36
TOP3B-215ENST00000470338 IDI2Q9BXS1 227 aa17.31■□□□□ 0.36
TOP3B-215ENST00000470338 RAI14Q9P0K7 980 aa17.31■□□□□ 0.36
TOP3B-215ENST00000470338 LRP2BPQ9P2M1 347 aa17.31■□□□□ 0.36
TOP3B-215ENST00000470338 FAM198AQ9UFP1 575 aa17.31■□□□□ 0.36
TOP3B-215ENST00000470338 DOCK2Q92608 1830 aa17.31■□□□□ 0.36
TOP3B-215ENST00000470338 CA12O43570 354 aa17.3■□□□□ 0.36
TOP3B-215ENST00000470338 BTDP43251 543 aa17.3■□□□□ 0.36
TOP3B-215ENST00000470338 SLC10A4Q96EP9 437 aa17.3■□□□□ 0.36
TOP3B-215ENST00000470338 DCTPP1Q9H773 170 aa17.3■□□□□ 0.36
TOP3B-215ENST00000470338 RFX7Q2KHR2 1363 aa17.29■□□□□ 0.36
TOP3B-215ENST00000470338 MAP4K4O95819 1239 aaPredicted RBP17.29■□□□□ 0.36
TOP3B-215ENST00000470338 HSPA8P11142 646 aaKnown RBP17.29■□□□□ 0.36
TOP3B-215ENST00000470338 ANKRD13AQ8IZ07 590 aa17.29■□□□□ 0.36
TOP3B-215ENST00000470338 HOOK2Q96ED9 719 aa17.29■□□□□ 0.36
TOP3B-215ENST00000470338 CLMNQ96JQ2 1002 aa17.29■□□□□ 0.36
TOP3B-215ENST00000470338 PRDM10Q9NQV6 1147 aa17.29■□□□□ 0.36
TOP3B-215ENST00000470338 PCDHB15Q9Y5E8 787 aa17.29■□□□□ 0.36
TOP3B-215ENST00000470338 CDK5RAP2Q96SN8 1893 aa17.29■□□□□ 0.36
TOP3B-215ENST00000470338 ENTPD3O75355 529 aa17.28■□□□□ 0.36
TOP3B-215ENST00000470338 WDHD1O75717 1129 aaPredicted RBP17.28■□□□□ 0.36
TOP3B-215ENST00000470338 IFIT2P09913 472 aaKnown RBP17.28■□□□□ 0.36
TOP3B-215ENST00000470338 RHBDL3P58872 404 aa17.28■□□□□ 0.36
TOP3B-215ENST00000470338 TCP10Q12799 353 aa17.28■□□□□ 0.36
TOP3B-215ENST00000470338 COL13A1Q5TAT6 717 aaPredicted RBP17.28■□□□□ 0.36
TOP3B-215ENST00000470338 SPRYD7Q5W111 196 aa17.28■□□□□ 0.36
TOP3B-215ENST00000470338 CRBNQ96SW2 442 aa17.28■□□□□ 0.36
TOP3B-215ENST00000470338 LRRCC1Q9C099 1032 aa17.28■□□□□ 0.36
TOP3B-215ENST00000470338 PIH1D3Q9NQM4 214 aaKnown RBP17.28■□□□□ 0.36
TOP3B-215ENST00000470338 NPM3O75607 178 aaKnown RBP17.27■□□□□ 0.36
TOP3B-215ENST00000470338 RGS3P49796 1198 aa17.27■□□□□ 0.36
TOP3B-215ENST00000470338 LBX1P52954 281 aa17.27■□□□□ 0.36
TOP3B-215ENST00000470338 MAP3K9P80192 1104 aa17.27■□□□□ 0.36
TOP3B-215ENST00000470338 NAA16Q6N069 864 aaPredicted RBP17.27■□□□□ 0.36
TOP3B-215ENST00000470338 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.27■□□□□ 0.36
TOP3B-215ENST00000470338 ZFPM1Q8IX07 1006 aa17.27■□□□□ 0.36
TOP3B-215ENST00000470338 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.27■□□□□ 0.36
TOP3B-215ENST00000470338 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.27■□□□□ 0.36
TOP3B-215ENST00000470338 FOCADQ5VW36 1801 aa17.26■□□□□ 0.35
TOP3B-215ENST00000470338 ZBTB48P10074 688 aaPredicted RBP17.26■□□□□ 0.35
TOP3B-215ENST00000470338 TM4SF4P48230 202 aa17.26■□□□□ 0.35
TOP3B-215ENST00000470338 DCAF15Q66K64 600 aa17.26■□□□□ 0.35
TOP3B-215ENST00000470338 WNK4Q96J92 1243 aa17.26■□□□□ 0.35
TOP3B-215ENST00000470338 ANTXR1Q9H6X2 564 aa17.26■□□□□ 0.35
TOP3B-215ENST00000470338 DDX4Q9NQI0 724 aaKnown RBP17.26■□□□□ 0.35
TOP3B-215ENST00000470338 NDUFB9Q9Y6M9 179 aa17.26■□□□□ 0.35
TOP3B-215ENST00000470338 PPP4CP60510 307 aa17.25■□□□□ 0.35
TOP3B-215ENST00000470338 RNF186Q9NXI6 227 aa17.25■□□□□ 0.35
TOP3B-215ENST00000470338 SAGE1Q9NXZ1 904 aa17.25■□□□□ 0.35
TOP3B-215ENST00000470338 CASP8AP2Q9UKL3 1982 aa17.25■□□□□ 0.35
TOP3B-215ENST00000470338 SMARCA5O60264 1052 aaPredicted RBP17.24■□□□□ 0.35
TOP3B-215ENST00000470338 MKRN3Q13064 507 aaKnown RBP17.24■□□□□ 0.35
TOP3B-215ENST00000470338 TMED8Q6PL24 325 aaPredicted RBP17.24■□□□□ 0.35
TOP3B-215ENST00000470338 MIGA2Q7L4E1 593 aa17.24■□□□□ 0.35
TOP3B-215ENST00000470338 SH3BP5LQ7L8J4 393 aa17.24■□□□□ 0.35
TOP3B-215ENST00000470338 ADGRA1Q86SQ6 560 aa17.24■□□□□ 0.35
TOP3B-215ENST00000470338 ZNF341Q9BYN7 854 aa17.24■□□□□ 0.35
TOP3B-215ENST00000470338 TSKSQ9UJT2 592 aa17.24■□□□□ 0.35
TOP3B-215ENST00000470338 ZNF112Q9UJU3 913 aa17.24■□□□□ 0.35
TOP3B-215ENST00000470338 IDH1O75874 414 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms