RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 SNAP23O00161 211 aa11.3□□□□□ -0.6
SYNGAP1-205ENST00000470232 PLIN1O60240 522 aa11.3□□□□□ -0.6
SYNGAP1-205ENST00000470232 HIBADHP31937 336 aaKnown RBP11.3□□□□□ -0.6
SYNGAP1-205ENST00000470232 HDLBPQ00341 1268 aaKnown RBP11.3□□□□□ -0.6
SYNGAP1-205ENST00000470232 TAF7LQ5H9L4 462 aa11.3□□□□□ -0.6
SYNGAP1-205ENST00000470232 NECAB2Q7Z6G3 386 aa11.3□□□□□ -0.6
SYNGAP1-205ENST00000470232 C8orf58Q8NAV2 365 aa11.3□□□□□ -0.6
SYNGAP1-205ENST00000470232 PARK7Q99497 189 aaKnown RBP11.3□□□□□ -0.6
SYNGAP1-205ENST00000470232 ZNF341Q9BYN7 854 aa11.3□□□□□ -0.6
SYNGAP1-205ENST00000470232 CHMP3Q9Y3E7 222 aa11.3□□□□□ -0.6
SYNGAP1-205ENST00000470232 ADCY3O60266 1144 aa11.29□□□□□ -0.6
SYNGAP1-205ENST00000470232 CTGFP29279 349 aa11.29□□□□□ -0.6
SYNGAP1-205ENST00000470232 PRKCZQ05513 592 aa11.29□□□□□ -0.6
SYNGAP1-205ENST00000470232 UBE4AQ14139 1066 aa11.29□□□□□ -0.6
SYNGAP1-205ENST00000470232 CCDC57Q2TAC2 916 aa11.29□□□□□ -0.6
SYNGAP1-205ENST00000470232 FKBP1CQ5VVH2 108 aa11.29□□□□□ -0.6
SYNGAP1-205ENST00000470232 LDHAL6AQ6ZMR3 332 aa11.29□□□□□ -0.6
SYNGAP1-205ENST00000470232 FAM83AQ86UY5 434 aa11.29□□□□□ -0.6
SYNGAP1-205ENST00000470232 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.29□□□□□ -0.6
SYNGAP1-205ENST00000470232 TDRD7Q8NHU6 1098 aaKnown RBP11.29□□□□□ -0.6
SYNGAP1-205ENST00000470232 PXYLP1Q8TE99 480 aa11.29□□□□□ -0.6
SYNGAP1-205ENST00000470232 UNC93B1Q9H1C4 597 aa11.29□□□□□ -0.6
SYNGAP1-205ENST00000470232 CNNM1Q9NRU3 951 aa11.29□□□□□ -0.6
SYNGAP1-205ENST00000470232 FRAT2O75474 233 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-205ENST00000470232 NEFLP07196 543 aa11.28□□□□□ -0.6
SYNGAP1-205ENST00000470232 LRIT3Q3SXY7 679 aa11.28□□□□□ -0.6
SYNGAP1-205ENST00000470232 VPS37DQ86XT2 251 aa11.28□□□□□ -0.6
SYNGAP1-205ENST00000470232 CDAN1Q8IWY9 1227 aa11.28□□□□□ -0.6
SYNGAP1-205ENST00000470232 TBC1D22AQ8WUA7 517 aa11.28□□□□□ -0.6
SYNGAP1-205ENST00000470232 TEKT1Q969V4 418 aa11.28□□□□□ -0.6
SYNGAP1-205ENST00000470232 GDF15Q99988 308 aa11.28□□□□□ -0.6
SYNGAP1-205ENST00000470232 MRIQ9BWK5 157 aa11.28□□□□□ -0.6
SYNGAP1-205ENST00000470232 ADAMTS8Q9UP79 889 aa11.28□□□□□ -0.6
SYNGAP1-205ENST00000470232 UNC80Q8N2C7 3258 aa11.28□□□□□ -0.6
SYNGAP1-205ENST00000470232 ZSWIM8A7E2V4 1837 aa11.28□□□□□ -0.6
SYNGAP1-205ENST00000470232 CASP7P55210 303 aa11.27□□□□□ -0.61
SYNGAP1-205ENST00000470232 LINS1Q8NG48 757 aa11.27□□□□□ -0.61
SYNGAP1-205ENST00000470232 DEFB118Q96PH6 123 aa11.27□□□□□ -0.61
SYNGAP1-205ENST00000470232 COL25A1Q9BXS0 654 aaPredicted RBP11.27□□□□□ -0.61
SYNGAP1-205ENST00000470232 MTMR10Q9NXD2 777 aa11.27□□□□□ -0.61
SYNGAP1-205ENST00000470232 KCNH4Q9UQ05 1017 aa11.27□□□□□ -0.61
SYNGAP1-205ENST00000470232 CXCL11O14625 94 aa11.26□□□□□ -0.61
SYNGAP1-205ENST00000470232 INHAP05111 366 aa11.26□□□□□ -0.61
SYNGAP1-205ENST00000470232 BCRP11274 1271 aa11.26□□□□□ -0.61
SYNGAP1-205ENST00000470232 IRF5Q13568 498 aa11.26□□□□□ -0.61
SYNGAP1-205ENST00000470232 FASTKD5Q7L8L6 764 aaKnown RBP11.26□□□□□ -0.61
SYNGAP1-205ENST00000470232 TDHQ8IZJ6 230 aa11.26□□□□□ -0.61
SYNGAP1-205ENST00000470232 ANKLE1Q8NAG6 615 aa11.26□□□□□ -0.61
SYNGAP1-205ENST00000470232 DNAAF4Q8WXU2 420 aa11.26□□□□□ -0.61
SYNGAP1-205ENST00000470232 PAWRQ96IZ0 340 aaKnown RBP11.26□□□□□ -0.61
SYNGAP1-205ENST00000470232 MAST3O60307 1309 aa11.26□□□□□ -0.61
SYNGAP1-205ENST00000470232 ADGRA2Q96PE1 1338 aa11.26□□□□□ -0.61
SYNGAP1-205ENST00000470232 MYBBP1AQ9BQG0 1328 aaKnown RBP11.26□□□□□ -0.61
SYNGAP1-205ENST00000470232 ARAP2Q8WZ64 1704 aa11.26□□□□□ -0.61
SYNGAP1-205ENST00000470232 GYG1P46976 350 aa11.25□□□□□ -0.61
SYNGAP1-205ENST00000470232 FLT3LGP49771 235 aa11.25□□□□□ -0.61
SYNGAP1-205ENST00000470232 MKRN4PQ13434 485 aaPredicted RBP11.25□□□□□ -0.61
SYNGAP1-205ENST00000470232 FKBP5Q13451 457 aaPredicted RBP11.25□□□□□ -0.61
SYNGAP1-205ENST00000470232 CAVIN4Q5BKX8 364 aa11.25□□□□□ -0.61
SYNGAP1-205ENST00000470232 Q7L0L9 218 aa11.25□□□□□ -0.61
SYNGAP1-205ENST00000470232 MIGA2Q7L4E1 593 aa11.25□□□□□ -0.61
SYNGAP1-205ENST00000470232 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.25□□□□□ -0.61
SYNGAP1-205ENST00000470232 C7orf61Q8IZ16 206 aa11.25□□□□□ -0.61
SYNGAP1-205ENST00000470232 COA7Q96BR5 231 aa11.25□□□□□ -0.61
SYNGAP1-205ENST00000470232 FAM84BQ96KN1 310 aaPredicted RBP11.25□□□□□ -0.61
SYNGAP1-205ENST00000470232 ZDHHC15Q96MV8 337 aa11.25□□□□□ -0.61
SYNGAP1-205ENST00000470232 CRISPLD2Q9H0B8 497 aa11.25□□□□□ -0.61
SYNGAP1-205ENST00000470232 PAK6Q9NQU5 681 aaPredicted RBP11.25□□□□□ -0.61
SYNGAP1-205ENST00000470232 GABRQQ9UN88 632 aa11.25□□□□□ -0.61
SYNGAP1-205ENST00000470232 TNPO2O14787 897 aaKnown RBP11.24□□□□□ -0.61
SYNGAP1-205ENST00000470232 INPP5BP32019 993 aa11.24□□□□□ -0.61
SYNGAP1-205ENST00000470232 BCAMP50895 628 aa11.24□□□□□ -0.61
SYNGAP1-205ENST00000470232 CACNB3P54284 484 aa11.24□□□□□ -0.61
SYNGAP1-205ENST00000470232 FOXO4P98177 505 aa11.24□□□□□ -0.61
SYNGAP1-205ENST00000470232 FLIIQ13045 1269 aa11.24□□□□□ -0.61
SYNGAP1-205ENST00000470232 LMBR1LQ6UX01 489 aa11.24□□□□□ -0.61
SYNGAP1-205ENST00000470232 TSPYL6Q8N831 410 aa11.24□□□□□ -0.61
SYNGAP1-205ENST00000470232 UBE2OQ9C0C9 1292 aaKnown RBP11.24□□□□□ -0.61
SYNGAP1-205ENST00000470232 NBPF3Q9H094 633 aa11.24□□□□□ -0.61
SYNGAP1-205ENST00000470232 ZNF112Q9UJU3 913 aa11.24□□□□□ -0.61
SYNGAP1-205ENST00000470232 ZMYND8Q9ULU4 1186 aaPredicted RBP11.24□□□□□ -0.61
SYNGAP1-205ENST00000470232 SUGT1Q9Y2Z0 365 aa11.24□□□□□ -0.61
SYNGAP1-205ENST00000470232 APAF1O14727 1248 aa11.23□□□□□ -0.61
SYNGAP1-205ENST00000470232 ELNP15502 786 aa11.23□□□□□ -0.61
SYNGAP1-205ENST00000470232 CHAF1AQ13111 956 aaPredicted RBP11.23□□□□□ -0.61
SYNGAP1-205ENST00000470232 NOL9Q5SY16 702 aaKnown RBP11.23□□□□□ -0.61
SYNGAP1-205ENST00000470232 HHIPL2Q6UWX4 724 aa11.23□□□□□ -0.61
SYNGAP1-205ENST00000470232 G2E3Q7L622 706 aa11.23□□□□□ -0.61
SYNGAP1-205ENST00000470232 FAM151AQ8WW52 585 aa11.23□□□□□ -0.61
SYNGAP1-205ENST00000470232 TAOK2Q9UL54 1235 aa11.23□□□□□ -0.61
SYNGAP1-205ENST00000470232 SLC45A1Q9Y2W3 748 aa11.23□□□□□ -0.61
SYNGAP1-205ENST00000470232 RPAP1Q9BWH6 1393 aaPredicted RBP11.23□□□□□ -0.61
SYNGAP1-205ENST00000470232 MGAMO43451 1857 aa11.23□□□□□ -0.61
SYNGAP1-205ENST00000470232 CYP2C8P10632 490 aa11.22□□□□□ -0.61
SYNGAP1-205ENST00000470232 MAGEA10P43363 369 aaPredicted RBP11.22□□□□□ -0.61
SYNGAP1-205ENST00000470232 TWISTNBQ3B726 338 aaPredicted RBP11.22□□□□□ -0.61
SYNGAP1-205ENST00000470232 GPAT2Q6NUI2 795 aa11.22□□□□□ -0.61
SYNGAP1-205ENST00000470232 MROH5Q6ZUA9 1318 aa11.22□□□□□ -0.61
SYNGAP1-205ENST00000470232 FBXO33Q7Z6M2 555 aa11.22□□□□□ -0.61
SYNGAP1-205ENST00000470232 SMCR8Q8TEV9 937 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms