RNA–Protein interactions for RNA: ENST00000469882.5

FXR1-208, Transcript of FMR1 autosomal homolog 1, human

TSL 3

Gene FXR1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-208	ENST00000469882	VGLL4	Q14135	290 aa		13.91	□□□□□ -0.18
FXR1-208	ENST00000469882	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.91	□□□□□ -0.18
FXR1-208	ENST00000469882	ZGPAT	Q8N5A5	531 aa	Known RBP	13.91	□□□□□ -0.18
FXR1-208	ENST00000469882	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
FXR1-208	ENST00000469882	ABCF2	Q9UG63	623 aa		13.91	□□□□□ -0.18
FXR1-208	ENST00000469882	RFX7	Q2KHR2	1363 aa		13.91	□□□□□ -0.18
FXR1-208	ENST00000469882	GAK	O14976	1311 aa		13.9	□□□□□ -0.18
FXR1-208	ENST00000469882	DOCK2	Q92608	1830 aa		13.9	□□□□□ -0.18
FXR1-208	ENST00000469882	MANSC4	A6NHS7	340 aa	Predicted RBP	13.9	□□□□□ -0.18
FXR1-208	ENST00000469882	ARID4A	P29374	1257 aa	Predicted RBP	13.9	□□□□□ -0.18
FXR1-208	ENST00000469882	DGKZ	Q13574	1117 aa		13.9	□□□□□ -0.18
FXR1-208	ENST00000469882	CEP85	Q6P2H3	762 aa		13.9	□□□□□ -0.18
FXR1-208	ENST00000469882	DZIP1	Q86YF9	867 aa	Known RBP	13.9	□□□□□ -0.18
FXR1-208	ENST00000469882	ZNF384	Q8TF68	577 aa		13.9	□□□□□ -0.18
FXR1-208	ENST00000469882	CNKSR2	Q8WXI2	1034 aa		13.9	□□□□□ -0.18
FXR1-208	ENST00000469882	OPTN	Q96CV9	577 aa		13.9	□□□□□ -0.18
FXR1-208	ENST00000469882	R3HDML	Q9H3Y0	253 aa		13.9	□□□□□ -0.18
FXR1-208	ENST00000469882	HMG20B	Q9P0W2	317 aa		13.9	□□□□□ -0.18
FXR1-208	ENST00000469882	FAM198A	Q9UFP1	575 aa		13.9	□□□□□ -0.18
FXR1-208	ENST00000469882	MAST2	Q6P0Q8	1798 aa		13.89	□□□□□ -0.19
FXR1-208	ENST00000469882	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
FXR1-208	ENST00000469882	SURF6	O75683	361 aa	Known RBP	13.89	□□□□□ -0.19
FXR1-208	ENST00000469882	MCAM	P43121	646 aa		13.89	□□□□□ -0.19
FXR1-208	ENST00000469882	TCP10	Q12799	353 aa		13.89	□□□□□ -0.19
FXR1-208	ENST00000469882	OS9	Q13438	667 aa	Predicted RBP	13.89	□□□□□ -0.19
FXR1-208	ENST00000469882	TNNI3K	Q59H18	835 aa		13.89	□□□□□ -0.19
FXR1-208	ENST00000469882	GORAB	Q5T7V8	394 aa		13.89	□□□□□ -0.19
FXR1-208	ENST00000469882	IFNL1	Q8IU54	200 aa		13.89	□□□□□ -0.19
FXR1-208	ENST00000469882	SPATA5	Q8NB90	893 aa		13.89	□□□□□ -0.19
FXR1-208	ENST00000469882	FAM151A	Q8WW52	585 aa		13.89	□□□□□ -0.19
FXR1-208	ENST00000469882	USP40	Q9NVE5	1235 aa		13.89	□□□□□ -0.19
FXR1-208	ENST00000469882	NOP58	Q9Y2X3	529 aa	Known RBP	13.89	□□□□□ -0.19
FXR1-208	ENST00000469882	FPGT-TNNI3K	V9GXZ4	949 aa		13.89	□□□□□ -0.19
FXR1-208	ENST00000469882	CENPF	P49454	3210 aa		13.89	□□□□□ -0.19
FXR1-208	ENST00000469882	MAP3K9	P80192	1104 aa		13.88	□□□□□ -0.19
FXR1-208	ENST00000469882	MECOM	Q03112	1051 aa		13.88	□□□□□ -0.19
FXR1-208	ENST00000469882	TBC1D9	Q6ZT07	1266 aa		13.88	□□□□□ -0.19
FXR1-208	ENST00000469882	ZFPM1	Q8IX07	1006 aa		13.88	□□□□□ -0.19
FXR1-208	ENST00000469882	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.88	□□□□□ -0.19
FXR1-208	ENST00000469882	WRNIP1	Q96S55	665 aa		13.88	□□□□□ -0.19
FXR1-208	ENST00000469882	DBNDD2	Q9BQY9	259 aa		13.88	□□□□□ -0.19
FXR1-208	ENST00000469882	CFHR5	Q9BXR6	569 aa		13.88	□□□□□ -0.19
FXR1-208	ENST00000469882	GPR108	Q9NPR9	543 aa		13.88	□□□□□ -0.19
FXR1-208	ENST00000469882	SNCAIP	Q9Y6H5	919 aa		13.88	□□□□□ -0.19
FXR1-208	ENST00000469882	AK9	Q5TCS8	1911 aa		13.88	□□□□□ -0.19
FXR1-208	ENST00000469882	MROH7-TTC4	A0A0A0MT08	1334 aa		13.88	□□□□□ -0.19
FXR1-208	ENST00000469882	ATRNL1	Q5VV63	1379 aa		13.87	□□□□□ -0.19
FXR1-208	ENST00000469882	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.87	□□□□□ -0.19
FXR1-208	ENST00000469882	MIGA2	Q7L4E1	593 aa		13.87	□□□□□ -0.19
FXR1-208	ENST00000469882	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.87	□□□□□ -0.19
FXR1-208	ENST00000469882	PTPN18	Q99952	460 aa		13.87	□□□□□ -0.19
FXR1-208	ENST00000469882	TLR7	Q9NYK1	1049 aa	Known RBP	13.87	□□□□□ -0.19
FXR1-208	ENST00000469882	RCAN3	Q9UKA8	241 aa		13.87	□□□□□ -0.19
FXR1-208	ENST00000469882	CSAD	Q9Y600	493 aa		13.87	□□□□□ -0.19
FXR1-208	ENST00000469882	GPR25	O00155	361 aa		13.86	□□□□□ -0.19
FXR1-208	ENST00000469882	UQCRFS1P1	P0C7P4	283 aa		13.86	□□□□□ -0.19
FXR1-208	ENST00000469882	BTD	P43251	543 aa		13.86	□□□□□ -0.19
FXR1-208	ENST00000469882	RGS3	P49796	1198 aa		13.86	□□□□□ -0.19
FXR1-208	ENST00000469882	INHBE	P58166	350 aa		13.86	□□□□□ -0.19
FXR1-208	ENST00000469882	NOM1	Q5C9Z4	860 aa	Known RBP	13.86	□□□□□ -0.19
FXR1-208	ENST00000469882	DCAF15	Q66K64	600 aa		13.86	□□□□□ -0.19
FXR1-208	ENST00000469882	ERICH6	Q7L0X2	663 aa		13.86	□□□□□ -0.19
FXR1-208	ENST00000469882	NSUN4	Q96CB9	384 aa	Known RBP	13.86	□□□□□ -0.19
FXR1-208	ENST00000469882	HOOK2	Q96ED9	719 aa		13.86	□□□□□ -0.19
FXR1-208	ENST00000469882	OTUD5	Q96G74	571 aa		13.86	□□□□□ -0.19
FXR1-208	ENST00000469882	FAM163A	Q96GL9	167 aa	Predicted RBP	13.86	□□□□□ -0.19
FXR1-208	ENST00000469882	MS4A4A	Q96JQ5	239 aa		13.86	□□□□□ -0.19
FXR1-208	ENST00000469882	IDI2	Q9BXS1	227 aa		13.86	□□□□□ -0.19
FXR1-208	ENST00000469882	DDX4	Q9NQI0	724 aa	Known RBP	13.86	□□□□□ -0.19
FXR1-208	ENST00000469882	DBNL	Q9UJU6	430 aa	Known RBP	13.86	□□□□□ -0.19
FXR1-208	ENST00000469882	COG6	Q9Y2V7	657 aa		13.86	□□□□□ -0.19
FXR1-208	ENST00000469882	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.86	□□□□□ -0.19
FXR1-208	ENST00000469882	BRCA2	P51587	3418 aa		13.85	□□□□□ -0.19
FXR1-208	ENST00000469882	TESPA1	A2RU30	521 aa	Predicted RBP	13.85	□□□□□ -0.19
FXR1-208	ENST00000469882	SPDYE5	A6NIY4	337 aa		13.85	□□□□□ -0.19
FXR1-208	ENST00000469882	CCDC85C	A6NKD9	419 aa		13.85	□□□□□ -0.19
FXR1-208	ENST00000469882	WDHD1	O75717	1129 aa	Predicted RBP	13.85	□□□□□ -0.19
FXR1-208	ENST00000469882	ALDH1A1	P00352	501 aa		13.85	□□□□□ -0.19
FXR1-208	ENST00000469882	TTC39A	Q5SRH9	613 aa		13.85	□□□□□ -0.19
FXR1-208	ENST00000469882	SH3BP5L	Q7L8J4	393 aa		13.85	□□□□□ -0.19
FXR1-208	ENST00000469882	CTU1	Q7Z7A3	348 aa	Known RBP	13.85	□□□□□ -0.19
FXR1-208	ENST00000469882	SLF2	Q8IX21	1173 aa		13.85	□□□□□ -0.19
FXR1-208	ENST00000469882	BRI3BP	Q8WY22	251 aa		13.85	□□□□□ -0.19
FXR1-208	ENST00000469882	ZNF341	Q9BYN7	854 aa		13.85	□□□□□ -0.19
FXR1-208	ENST00000469882	SNRK	Q9NRH2	765 aa		13.85	□□□□□ -0.19
FXR1-208	ENST00000469882	EXOC6B	Q9Y2D4	811 aa		13.85	□□□□□ -0.19
FXR1-208	ENST00000469882	GPR75-ASB3	A0A0A6YYF3	556 aa		13.84	□□□□□ -0.19
FXR1-208	ENST00000469882	MS4A1	P11836	297 aa		13.84	□□□□□ -0.19
FXR1-208	ENST00000469882	INPP5B	P32019	993 aa		13.84	□□□□□ -0.19
FXR1-208	ENST00000469882	RHBDL3	P58872	404 aa		13.84	□□□□□ -0.19
FXR1-208	ENST00000469882	CRHR2	Q13324	411 aa		13.84	□□□□□ -0.19
FXR1-208	ENST00000469882	C20orf194	Q5TEA3	1177 aa		13.84	□□□□□ -0.19
FXR1-208	ENST00000469882	EAF2	Q96CJ1	260 aa	Predicted RBP	13.84	□□□□□ -0.19
FXR1-208	ENST00000469882	RAI14	Q9P0K7	980 aa		13.84	□□□□□ -0.19
FXR1-208	ENST00000469882	ZNF112	Q9UJU3	913 aa		13.84	□□□□□ -0.19
FXR1-208	ENST00000469882	CCL15-CCL14	A0A0B4J2E2	113 aa		13.83	□□□□□ -0.2
FXR1-208	ENST00000469882	ENTPD3	O75355	529 aa		13.83	□□□□□ -0.2
FXR1-208	ENST00000469882	PICALM	Q13492	652 aa		13.83	□□□□□ -0.2
FXR1-208	ENST00000469882	CCL15	Q16663	113 aa		13.83	□□□□□ -0.2
FXR1-208	ENST00000469882	CCDC158	Q5M9N0	1113 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms