RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 UTP14AQ9BVJ6 771 aaKnown RBP11.89□□□□□ -0.51
SMC4-210ENST00000469762 FANCLQ9NW38 375 aa11.89□□□□□ -0.51
SMC4-210ENST00000469762 PAPPAQ13219 1627 aa11.89□□□□□ -0.51
SMC4-210ENST00000469762 RESP18Q5W5W9 173 aa11.89□□□□□ -0.51
SMC4-210ENST00000469762 RANBP6O60518 1105 aaKnown RBP11.89□□□□□ -0.51
SMC4-210ENST00000469762 SEC31AO94979 1220 aaKnown RBP11.89□□□□□ -0.51
SMC4-210ENST00000469762 CYP2C19P33261 490 aa11.89□□□□□ -0.51
SMC4-210ENST00000469762 SYKP43405 635 aa11.89□□□□□ -0.51
SMC4-210ENST00000469762 UBASH3AP57075 661 aa11.89□□□□□ -0.51
SMC4-210ENST00000469762 IMMTQ16891 758 aaKnown RBP11.89□□□□□ -0.51
SMC4-210ENST00000469762 GORABQ5T7V8 394 aa11.89□□□□□ -0.51
SMC4-210ENST00000469762 WDR24Q96S15 920 aa11.89□□□□□ -0.51
SMC4-210ENST00000469762 ATG3Q9NT62 314 aa11.89□□□□□ -0.51
SMC4-210ENST00000469762 TACC3Q9Y6A5 838 aa11.89□□□□□ -0.51
SMC4-210ENST00000469762 BMS1Q14692 1282 aaKnown RBP11.88□□□□□ -0.51
SMC4-210ENST00000469762 ZBTB3Q9H5J0 574 aa11.88□□□□□ -0.51
SMC4-210ENST00000469762 PPP6R2O75170 966 aa11.88□□□□□ -0.51
SMC4-210ENST00000469762 GRIN1Q05586 938 aa11.88□□□□□ -0.51
SMC4-210ENST00000469762 PHKBQ93100 1093 aa11.88□□□□□ -0.51
SMC4-210ENST00000469762 GPAA1O43292 621 aa11.88□□□□□ -0.51
SMC4-210ENST00000469762 MYL5Q02045 173 aa11.88□□□□□ -0.51
SMC4-210ENST00000469762 KRT40Q6A162 431 aa11.88□□□□□ -0.51
SMC4-210ENST00000469762 NCOA7Q8NI08 942 aa11.88□□□□□ -0.51
SMC4-210ENST00000469762 APPBP2Q92624 585 aa11.88□□□□□ -0.51
SMC4-210ENST00000469762 CARD6Q9BX69 1037 aa11.88□□□□□ -0.51
SMC4-210ENST00000469762 TMEM51Q9NW97 253 aa11.88□□□□□ -0.51
SMC4-210ENST00000469762 PCDHA5Q9Y5H7 936 aa11.88□□□□□ -0.51
SMC4-210ENST00000469762 RIC1Q4ADV7 1423 aa11.88□□□□□ -0.51
SMC4-210ENST00000469762 SYNE3Q6ZMZ3 975 aa11.87□□□□□ -0.51
SMC4-210ENST00000469762 INCENPQ9NQS7 918 aa11.87□□□□□ -0.51
SMC4-210ENST00000469762 ZMYM6O95789 1325 aa11.87□□□□□ -0.51
SMC4-210ENST00000469762 WDR19Q8NEZ3 1342 aa11.87□□□□□ -0.51
SMC4-210ENST00000469762 FMR1Q06787 632 aaKnown RBP eCLIP11.87□□□□□ -0.513e-7■□□□□ 10
SMC4-210ENST00000469762 WASHC4Q2M389 1173 aa11.87□□□□□ -0.51
SMC4-210ENST00000469762 CCDC191Q8NCU4 936 aa11.87□□□□□ -0.51
SMC4-210ENST00000469762 CABLES1Q8TDN4 633 aa11.87□□□□□ -0.51
SMC4-210ENST00000469762 KIFC2Q96AC6 838 aa11.87□□□□□ -0.51
SMC4-210ENST00000469762 SEC31BQ9NQW1 1179 aa11.87□□□□□ -0.51
SMC4-210ENST00000469762 ERICH4A6NGS2 130 aa11.87□□□□□ -0.51
SMC4-210ENST00000469762 TBC1D8O95759 1140 aa11.87□□□□□ -0.51
SMC4-210ENST00000469762 TC2NQ8N9U0 490 aa11.87□□□□□ -0.51
SMC4-210ENST00000469762 ALG1Q9BT22 464 aa11.87□□□□□ -0.51
SMC4-210ENST00000469762 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.87□□□□□ -0.51
SMC4-210ENST00000469762 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.87□□□□□ -0.51
SMC4-210ENST00000469762 LRP6O75581 1613 aa11.87□□□□□ -0.51
SMC4-210ENST00000469762 SH2B2O14492 632 aaPredicted RBP11.86□□□□□ -0.51
SMC4-210ENST00000469762 TUBB4AP04350 444 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 MCAMP43121 646 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 CABP4P57796 275 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 CHRNA2Q15822 529 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 HSP90AA4PQ58FG1 418 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 STK11IPQ8N1F8 1099 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 PPP2R2CQ9Y2T4 447 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 DHX16O60231 1041 aaKnown RBP11.86□□□□□ -0.51
SMC4-210ENST00000469762 ZNF18P17022 549 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 TOB1P50616 345 aaPredicted RBP11.86□□□□□ -0.51
SMC4-210ENST00000469762 MAP3K9P80192 1104 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 SPECC1Q5M775 1068 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 TAF3Q5VWG9 929 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 APOA5Q6Q788 366 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 TOGARAM2Q6ZUX3 1019 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 HOMER1Q86YM7 354 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 RGS22Q8NE09 1264 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 IGDCC4Q8TDY8 1250 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 C19orf44Q9H6X5 657 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 UBN2Q6ZU65 1347 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 NOL10Q9BSC4 688 aaKnown RBP11.86□□□□□ -0.51
SMC4-210ENST00000469762 ISCA1Q9BUE6 129 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 ZNF213O14771 459 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 PRR29P0C7W0 189 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 CFAP100Q494V2 611 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 KRBA2Q6ZNG9 492 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 RSRC2Q7L4I2 434 aaKnown RBP11.86□□□□□ -0.51
SMC4-210ENST00000469762 SYNE4Q8N205 404 aa11.86□□□□□ -0.51
SMC4-210ENST00000469762 A0A0U1RQJ8 604 aa11.85□□□□□ -0.51
SMC4-210ENST00000469762 CPLX1O14810 134 aa11.85□□□□□ -0.51
SMC4-210ENST00000469762 URI1O94763 535 aaPredicted RBP11.85□□□□□ -0.51
SMC4-210ENST00000469762 SERPINC1P01008 464 aa11.85□□□□□ -0.51
SMC4-210ENST00000469762 ATRIPQ8WXE1 791 aa11.85□□□□□ -0.51
SMC4-210ENST00000469762 CCDC85AQ96PX6 553 aaPredicted RBP11.85□□□□□ -0.51
SMC4-210ENST00000469762 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.85□□□□□ -0.51
SMC4-210ENST00000469762 ZCCHC17Q9NP64 241 aaKnown RBP11.85□□□□□ -0.51
SMC4-210ENST00000469762 CEP126Q9P2H0 1117 aa11.85□□□□□ -0.51
SMC4-210ENST00000469762 ANGEL1Q9UNK9 670 aaKnown RBP11.85□□□□□ -0.51
SMC4-210ENST00000469762 ATRNO75882 1429 aa11.85□□□□□ -0.51
SMC4-210ENST00000469762 SHANK3Q9BYB0 1731 aa11.85□□□□□ -0.51
SMC4-210ENST00000469762 EFCAB8A8MWE9 144 aa11.85□□□□□ -0.51
SMC4-210ENST00000469762 ZFYP08048 801 aaPredicted RBP11.85□□□□□ -0.51
SMC4-210ENST00000469762 ZRSR1Q15695 479 aaKnown RBP11.85□□□□□ -0.51
SMC4-210ENST00000469762 LRRFIP1Q32MZ4 808 aaKnown RBP11.85□□□□□ -0.51
SMC4-210ENST00000469762 TTC39AQ5SRH9 613 aa11.85□□□□□ -0.51
SMC4-210ENST00000469762 CHMP4CQ96CF2 233 aa11.85□□□□□ -0.51
SMC4-210ENST00000469762 MYL10Q9BUA6 226 aa11.85□□□□□ -0.51
SMC4-210ENST00000469762 GUCY1A2P33402 732 aa11.85□□□□□ -0.51
SMC4-210ENST00000469762 SARSP49591 514 aaKnown RBP11.85□□□□□ -0.51
SMC4-210ENST00000469762 IRX5P78411 483 aaPredicted RBP11.85□□□□□ -0.51
SMC4-210ENST00000469762 FCHSD1Q86WN1 690 aa11.85□□□□□ -0.51
SMC4-210ENST00000469762 ST5P78524 1137 aa11.84□□□□□ -0.51
SMC4-210ENST00000469762 APTXQ7Z2E3 356 aaKnown RBP11.84□□□□□ -0.51
SMC4-210ENST00000469762 UBXN4Q92575 508 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms