RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 IGHMBP2P38935 993 aaKnown RBP20.73■□□□□ 0.91
MCF2L-221ENST00000469415 SLC12A7Q9Y666 1083 aa20.73■□□□□ 0.91
MCF2L-221ENST00000469415 WDHD1O75717 1129 aaPredicted RBP20.72■□□□□ 0.91
MCF2L-221ENST00000469415 IARSP41252 1262 aaKnown RBP20.72■□□□□ 0.91
MCF2L-221ENST00000469415 KIF23Q02241 960 aaPredicted RBP20.72■□□□□ 0.91
MCF2L-221ENST00000469415 INTS5Q6P9B9 1019 aaKnown RBP20.72■□□□□ 0.91
MCF2L-221ENST00000469415 ZNF34Q8IZ26 560 aa20.72■□□□□ 0.91
MCF2L-221ENST00000469415 ENGASEQ8NFI3 743 aa20.72■□□□□ 0.91
MCF2L-221ENST00000469415 BCL9O00512 1426 aa20.72■□□□□ 0.91
MCF2L-221ENST00000469415 CDHR2Q9BYE9 1310 aa20.72■□□□□ 0.91
MCF2L-221ENST00000469415 CCDC69A6NI79 296 aa20.72■□□□□ 0.91
MCF2L-221ENST00000469415 C3orf67Q6ZVT6 689 aa20.72■□□□□ 0.91
MCF2L-221ENST00000469415 SMC2O95347 1197 aa20.72■□□□□ 0.91
MCF2L-221ENST00000469415 IQCB1Q15051 598 aa20.72■□□□□ 0.91
MCF2L-221ENST00000469415 ANO1Q5XXA6 986 aa20.72■□□□□ 0.91
MCF2L-221ENST00000469415 PTF1AQ7RTS3 328 aa20.72■□□□□ 0.91
MCF2L-221ENST00000469415 MARCH10Q8NA82 808 aaPredicted RBP20.72■□□□□ 0.91
MCF2L-221ENST00000469415 FBXO3Q9UK99 471 aa20.72■□□□□ 0.91
MCF2L-221ENST00000469415 TJP1Q07157 1748 aa20.71■□□□□ 0.91
MCF2L-221ENST00000469415 SH2B2O14492 632 aaPredicted RBP20.71■□□□□ 0.91
MCF2L-221ENST00000469415 RRP9O43818 475 aaKnown RBP20.71■□□□□ 0.91
MCF2L-221ENST00000469415 TDRD7Q8NHU6 1098 aaKnown RBP20.71■□□□□ 0.91
MCF2L-221ENST00000469415 CYP7A1P22680 504 aa20.71■□□□□ 0.91
MCF2L-221ENST00000469415 CHRNDQ07001 517 aa20.71■□□□□ 0.91
MCF2L-221ENST00000469415 RANBP6O60518 1105 aaKnown RBP20.7■□□□□ 0.9
MCF2L-221ENST00000469415 ZNF202O95125 648 aa20.7■□□□□ 0.9
MCF2L-221ENST00000469415 EIF5P55010 431 aaKnown RBP20.7■□□□□ 0.9
MCF2L-221ENST00000469415 UBE3CQ15386 1083 aa20.7■□□□□ 0.9
MCF2L-221ENST00000469415 RBM43Q6ZSC3 357 aaKnown RBP20.7■□□□□ 0.9
MCF2L-221ENST00000469415 FMR1NBQ8N0W7 255 aaPredicted RBP20.7■□□□□ 0.9
MCF2L-221ENST00000469415 RTEL1Q9NZ71 1219 aa20.7■□□□□ 0.9
MCF2L-221ENST00000469415 UQCRFS1P1P0C7P4 283 aa20.7■□□□□ 0.9
MCF2L-221ENST00000469415 ADALQ6DHV7 355 aa20.7■□□□□ 0.9
MCF2L-221ENST00000469415 MFSD6Q6ZSS7 791 aa20.7■□□□□ 0.9
MCF2L-221ENST00000469415 CEP57L1Q8IYX8 460 aa20.7■□□□□ 0.9
MCF2L-221ENST00000469415 PFKFB1P16118 471 aa20.7■□□□□ 0.9
MCF2L-221ENST00000469415 LMOD1P29536 600 aaPredicted RBP20.7■□□□□ 0.9
MCF2L-221ENST00000469415 TRIM29Q14134 588 aa20.7■□□□□ 0.9
MCF2L-221ENST00000469415 CPLX2Q6PUV4 134 aaKnown RBP20.7■□□□□ 0.9
MCF2L-221ENST00000469415 ADGRA1Q86SQ6 560 aa20.7■□□□□ 0.9
MCF2L-221ENST00000469415 PDILTQ8N807 584 aa20.7■□□□□ 0.9
MCF2L-221ENST00000469415 TCRBV5S4A2TA0A5A2 114 aa20.69■□□□□ 0.9
MCF2L-221ENST00000469415 BTBD18B2RXH4 712 aa20.69■□□□□ 0.9
MCF2L-221ENST00000469415 SLC3A2P08195 630 aaKnown RBP20.69■□□□□ 0.9
MCF2L-221ENST00000469415 EVX2Q03828 476 aa20.69■□□□□ 0.9
MCF2L-221ENST00000469415 ANO10Q9NW15 660 aa20.69■□□□□ 0.9
MCF2L-221ENST00000469415 MTMR7Q9Y216 660 aa20.69■□□□□ 0.9
MCF2L-221ENST00000469415 GSG1L2A8MUP6 293 aa20.69■□□□□ 0.9
MCF2L-221ENST00000469415 TPD52L1Q16890 204 aaPredicted RBP20.69■□□□□ 0.9
MCF2L-221ENST00000469415 SLC51AQ86UW1 340 aa20.69■□□□□ 0.9
MCF2L-221ENST00000469415 DNAJC5Q9H3Z4 198 aa20.69■□□□□ 0.9
MCF2L-221ENST00000469415 PLA2G4DQ86XP0 818 aa20.68■□□□□ 0.9
MCF2L-221ENST00000469415 IGDCC4Q8TDY8 1250 aa20.68■□□□□ 0.9
MCF2L-221ENST00000469415 PATL2C9JE40 543 aaKnown RBP20.68■□□□□ 0.9
MCF2L-221ENST00000469415 NPHP1O15259 732 aa20.68■□□□□ 0.9
MCF2L-221ENST00000469415 DYNLL1P63167 89 aaKnown RBP20.68■□□□□ 0.9
MCF2L-221ENST00000469415 CCDC152Q4G0S7 254 aa20.68■□□□□ 0.9
MCF2L-221ENST00000469415 DHX40Q8IX18 779 aaKnown RBP20.68■□□□□ 0.9
MCF2L-221ENST00000469415 LY9Q9HBG7 655 aa20.68■□□□□ 0.9
MCF2L-221ENST00000469415 MROH7-TTC4A0A0A0MT08 1334 aa20.68■□□□□ 0.9
MCF2L-221ENST00000469415 PARP4Q9UKK3 1724 aaKnown RBP20.68■□□□□ 0.9
MCF2L-221ENST00000469415 RIOK3O14730 519 aaKnown RBP20.67■□□□□ 0.9
MCF2L-221ENST00000469415 CHAF1AQ13111 956 aaPredicted RBP20.67■□□□□ 0.9
MCF2L-221ENST00000469415 FAM98CQ17RN3 349 aaKnown RBP20.67■□□□□ 0.9
MCF2L-221ENST00000469415 ERFEQ4G0M1 354 aa20.67■□□□□ 0.9
MCF2L-221ENST00000469415 LAMB4A4D0S4 1761 aa20.67■□□□□ 0.9
MCF2L-221ENST00000469415 USP27XA6NNY8 438 aa20.67■□□□□ 0.9
MCF2L-221ENST00000469415 TFCP2L1Q9NZI6 479 aa20.67■□□□□ 0.9
MCF2L-221ENST00000469415 MROH5Q6ZUA9 1318 aa20.67■□□□□ 0.9
MCF2L-221ENST00000469415 LAMA4Q16363 1823 aa20.67■□□□□ 0.9
MCF2L-221ENST00000469415 FGFR2P21802 821 aa20.67■□□□□ 0.9
MCF2L-221ENST00000469415 ARID4AP29374 1257 aaPredicted RBP20.67■□□□□ 0.9
MCF2L-221ENST00000469415 NR5A1Q13285 461 aa20.67■□□□□ 0.9
MCF2L-221ENST00000469415 PNOCQ13519 176 aa20.67■□□□□ 0.9
MCF2L-221ENST00000469415 KCNG4Q8TDN1 519 aa20.67■□□□□ 0.9
MCF2L-221ENST00000469415 ZMYM6O95789 1325 aa20.66■□□□□ 0.9
MCF2L-221ENST00000469415 KIAA1468Q9P260 1216 aa20.66■□□□□ 0.9
MCF2L-221ENST00000469415 TOGARAM1Q9Y4F4 1720 aa20.66■□□□□ 0.9
MCF2L-221ENST00000469415 ERVV-1B6SEH8 477 aa20.66■□□□□ 0.9
MCF2L-221ENST00000469415 CTAGE5O15320 804 aa20.66■□□□□ 0.9
MCF2L-221ENST00000469415 FOXN1O15353 648 aa20.66■□□□□ 0.9
MCF2L-221ENST00000469415 CAMTA2O94983 1202 aa20.66■□□□□ 0.9
MCF2L-221ENST00000469415 EVCP57679 992 aa20.66■□□□□ 0.9
MCF2L-221ENST00000469415 XIRP1Q702N8 1843 aaKnown RBP20.66■□□□□ 0.9
MCF2L-221ENST00000469415 NUP188Q5SRE5 1749 aa20.65■□□□□ 0.9
MCF2L-221ENST00000469415 KLRK1P26718 216 aa20.65■□□□□ 0.9
MCF2L-221ENST00000469415 GRIN1Q05586 938 aa20.65■□□□□ 0.9
MCF2L-221ENST00000469415 NAA30Q147X3 362 aaPredicted RBP20.65■□□□□ 0.9
MCF2L-221ENST00000469415 AKNAD1Q5T1N1 836 aa20.65■□□□□ 0.9
MCF2L-221ENST00000469415 FAM217BQ9NTX9 383 aaPredicted RBP20.65■□□□□ 0.9
MCF2L-221ENST00000469415 IFNKQ9P0W0 207 aa20.65■□□□□ 0.9
MCF2L-221ENST00000469415 BAZ2BQ9UIF8 2168 aaKnown RBP20.65■□□□□ 0.9
MCF2L-221ENST00000469415 SYKP43405 635 aa20.65■□□□□ 0.9
MCF2L-221ENST00000469415 SSRP1Q08945 709 aaKnown RBP20.64■□□□□ 0.9
MCF2L-221ENST00000469415 MYRIPQ8NFW9 859 aa20.64■□□□□ 0.9
MCF2L-221ENST00000469415 TNNT1P13805 278 aa20.64■□□□□ 0.89
MCF2L-221ENST00000469415 WTAPQ15007 396 aa20.64■□□□□ 0.89
MCF2L-221ENST00000469415 ERICH2A1L162 156 aa20.64■□□□□ 0.89
MCF2L-221ENST00000469415 SKILP12757 684 aa20.64■□□□□ 0.89
MCF2L-221ENST00000469415 ATP1A3P13637 1013 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms