RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 DAGLAQ9Y4D2 1042 aa15.34■□□□□ 0.05
HDAC3-204ENST00000469207 ZSWIM8A7E2V4 1837 aa15.33■□□□□ 0.05
HDAC3-204ENST00000469207 TLR2O60603 784 aa15.33■□□□□ 0.04
HDAC3-204ENST00000469207 CETPP11597 493 aa15.33■□□□□ 0.04
HDAC3-204ENST00000469207 CTGFP29279 349 aa15.33■□□□□ 0.04
HDAC3-204ENST00000469207 FKBP1CQ5VVH2 108 aa15.33■□□□□ 0.04
HDAC3-204ENST00000469207 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.33■□□□□ 0.04
HDAC3-204ENST00000469207 WDR66Q8TBY9 1149 aa15.33■□□□□ 0.04
HDAC3-204ENST00000469207 SH3TC2Q8TF17 1288 aa15.33■□□□□ 0.04
HDAC3-204ENST00000469207 ZNF333Q96JL9 665 aa15.33■□□□□ 0.04
HDAC3-204ENST00000469207 SUGT1Q9Y2Z0 365 aa15.33■□□□□ 0.04
HDAC3-204ENST00000469207 KIAA0100Q14667 2235 aaKnown RBP15.33■□□□□ 0.04
HDAC3-204ENST00000469207 ADORA1P30542 326 aa15.32■□□□□ 0.04
HDAC3-204ENST00000469207 PHKA1P46020 1223 aa15.32■□□□□ 0.04
HDAC3-204ENST00000469207 PPIL2Q13356 520 aa15.32■□□□□ 0.04
HDAC3-204ENST00000469207 SNAPC2Q13487 334 aa15.32■□□□□ 0.04
HDAC3-204ENST00000469207 ATP2B3Q16720 1220 aa15.32■□□□□ 0.04
HDAC3-204ENST00000469207 ALDH1L2Q3SY69 923 aa15.32■□□□□ 0.04
HDAC3-204ENST00000469207 FAM151AQ8WW52 585 aa15.32■□□□□ 0.04
HDAC3-204ENST00000469207 ZNF341Q9BYN7 854 aa15.32■□□□□ 0.04
HDAC3-204ENST00000469207 USP40Q9NVE5 1235 aa15.32■□□□□ 0.04
HDAC3-204ENST00000469207 CEP126Q9P2H0 1117 aa15.32■□□□□ 0.04
HDAC3-204ENST00000469207 FAM198AQ9UFP1 575 aa15.32■□□□□ 0.04
HDAC3-204ENST00000469207 CPA4Q9UI42 421 aa15.32■□□□□ 0.04
HDAC3-204ENST00000469207 LRRFIP2Q9Y608 721 aaKnown RBP15.32■□□□□ 0.04
HDAC3-204ENST00000469207 KIF16BQ96L93 1317 aa15.32■□□□□ 0.04
HDAC3-204ENST00000469207 UBTFL1P0CB47 393 aaPredicted RBP15.31■□□□□ 0.04
HDAC3-204ENST00000469207 TIMM10P62072 90 aa15.31■□□□□ 0.04
HDAC3-204ENST00000469207 SLC9C1Q4G0N8 1177 aa15.31■□□□□ 0.04
HDAC3-204ENST00000469207 DCAF15Q66K64 600 aa15.31■□□□□ 0.04
HDAC3-204ENST00000469207 TRMT2AQ8IZ69 625 aaKnown RBP15.31■□□□□ 0.04
HDAC3-204ENST00000469207 TMEM106CQ9BVX2 250 aa15.31■□□□□ 0.04
HDAC3-204ENST00000469207 MAST3O60307 1309 aa15.31■□□□□ 0.04
HDAC3-204ENST00000469207 LDHBP07195 334 aaKnown RBP15.3■□□□□ 0.04
HDAC3-204ENST00000469207 LACTBP83111 547 aaPredicted RBP15.3■□□□□ 0.04
HDAC3-204ENST00000469207 PPATQ06203 517 aa15.3■□□□□ 0.04
HDAC3-204ENST00000469207 SLC4A8Q2Y0W8 1093 aa15.3■□□□□ 0.04
HDAC3-204ENST00000469207 C17orf99Q6UX52 265 aa15.3■□□□□ 0.04
HDAC3-204ENST00000469207 ZNF112Q9UJU3 913 aa15.3■□□□□ 0.04
HDAC3-204ENST00000469207 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.3■□□□□ 0.04
HDAC3-204ENST00000469207 MOGSQ13724 837 aa15.29■□□□□ 0.04
HDAC3-204ENST00000469207 NBPF11Q86T75 865 aa15.29■□□□□ 0.04
HDAC3-204ENST00000469207 MEIS3Q99687 375 aa15.29■□□□□ 0.04
HDAC3-204ENST00000469207 PCDH10Q9P2E7 1040 aa15.29■□□□□ 0.04
HDAC3-204ENST00000469207 AK9Q5TCS8 1911 aa15.28■□□□□ 0.04
HDAC3-204ENST00000469207 PDHXO00330 501 aa15.28■□□□□ 0.04
HDAC3-204ENST00000469207 CIAO1O76071 339 aa15.28■□□□□ 0.04
HDAC3-204ENST00000469207 ARHGEF6Q15052 776 aa15.28■□□□□ 0.04
HDAC3-204ENST00000469207 MTFR1Q15390 333 aa15.28■□□□□ 0.04
HDAC3-204ENST00000469207 SH3BP5LQ7L8J4 393 aa15.28■□□□□ 0.04
HDAC3-204ENST00000469207 HOOK2Q96ED9 719 aa15.28■□□□□ 0.04
HDAC3-204ENST00000469207 IL15P40933 162 aaPredicted RBP15.27■□□□□ 0.04
HDAC3-204ENST00000469207 PSMC4P43686 418 aa15.27■□□□□ 0.04
HDAC3-204ENST00000469207 RGS3P49796 1198 aa15.27■□□□□ 0.04
HDAC3-204ENST00000469207 KIF22Q14807 665 aa15.27■□□□□ 0.04
HDAC3-204ENST00000469207 HABP4Q5JVS0 413 aaKnown RBP15.27■□□□□ 0.04
HDAC3-204ENST00000469207 CCDC102BQ68D86 513 aa15.27■□□□□ 0.04
HDAC3-204ENST00000469207 GPAT2Q6NUI2 795 aa15.27■□□□□ 0.04
HDAC3-204ENST00000469207 ANKRD23Q86SG2 305 aa15.27■□□□□ 0.04
HDAC3-204ENST00000469207 TRIM47Q96LD4 638 aa15.27■□□□□ 0.04
HDAC3-204ENST00000469207 GNL3LQ9NVN8 582 aaKnown RBP15.27■□□□□ 0.04
HDAC3-204ENST00000469207 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.27■□□□□ 0.04
HDAC3-204ENST00000469207 DENND2AQ9ULE3 1009 aa15.27■□□□□ 0.04
HDAC3-204ENST00000469207 KCNH4Q9UQ05 1017 aa15.27■□□□□ 0.04
HDAC3-204ENST00000469207 TNNQ9UQP3 1299 aa15.27■□□□□ 0.04
HDAC3-204ENST00000469207 RPAP1Q9BWH6 1393 aaPredicted RBP15.26■□□□□ 0.03
HDAC3-204ENST00000469207 MYH13Q9UKX3 1938 aa15.26■□□□□ 0.03
HDAC3-204ENST00000469207 PHF20L1A8MW92 1017 aa15.26■□□□□ 0.03
HDAC3-204ENST00000469207 WDHD1O75717 1129 aaPredicted RBP15.26■□□□□ 0.03
HDAC3-204ENST00000469207 CYP2C8P10632 490 aa15.26■□□□□ 0.03
HDAC3-204ENST00000469207 ZCCHC17Q9NP64 241 aaKnown RBP15.26■□□□□ 0.03
HDAC3-204ENST00000469207 COPRSQ9NQ92 184 aa15.26■□□□□ 0.03
HDAC3-204ENST00000469207 DDX4Q9NQI0 724 aaKnown RBP15.26■□□□□ 0.03
HDAC3-204ENST00000469207 ABCF2Q9UG63 623 aa15.26■□□□□ 0.03
HDAC3-204ENST00000469207 ZHX2Q9Y6X8 837 aa15.26■□□□□ 0.03
HDAC3-204ENST00000469207 ADGRA2Q96PE1 1338 aa15.25■□□□□ 0.03
HDAC3-204ENST00000469207 SALL1Q9NSC2 1324 aa15.25■□□□□ 0.03
HDAC3-204ENST00000469207 DDTLA6NHG4 134 aaPredicted RBP15.25■□□□□ 0.03
HDAC3-204ENST00000469207 OSBPP22059 807 aa15.25■□□□□ 0.03
HDAC3-204ENST00000469207 TFCP2Q12800 502 aa15.25■□□□□ 0.03
HDAC3-204ENST00000469207 RASGRF1Q13972 1273 aa15.25■□□□□ 0.03
HDAC3-204ENST00000469207 CCDC84Q86UT8 332 aaPredicted RBP15.25■□□□□ 0.03
HDAC3-204ENST00000469207 FBXO3Q9UK99 471 aa15.25■□□□□ 0.03
HDAC3-204ENST00000469207 RBBP6Q7Z6E9 1792 aaKnown RBP15.24■□□□□ 0.03
HDAC3-204ENST00000469207 FMNL1O95466 1100 aaPredicted RBP15.24■□□□□ 0.03
HDAC3-204ENST00000469207 RARSP54136 660 aaKnown RBP15.24■□□□□ 0.03
HDAC3-204ENST00000469207 PICALMQ13492 652 aa15.24■□□□□ 0.03
HDAC3-204ENST00000469207 NOL9Q5SY16 702 aaKnown RBP15.24■□□□□ 0.03
HDAC3-204ENST00000469207 XAGE2Q96GT9 111 aa15.24■□□□□ 0.03
HDAC3-204ENST00000469207 API5Q9BZZ5 524 aaKnown RBP15.24■□□□□ 0.03
HDAC3-204ENST00000469207 SRRDQ9UH36 339 aa15.24■□□□□ 0.03
HDAC3-204ENST00000469207 ATRNL1Q5VV63 1379 aa15.24■□□□□ 0.03
HDAC3-204ENST00000469207 A0A1B0GUL7 405 aa15.23■□□□□ 0.03
HDAC3-204ENST00000469207 BTDP43251 543 aa15.23■□□□□ 0.03
HDAC3-204ENST00000469207 PI16Q6UXB8 463 aa15.23■□□□□ 0.03
HDAC3-204ENST00000469207 TBC1D9Q6ZT07 1266 aa15.23■□□□□ 0.03
HDAC3-204ENST00000469207 ZSCAN29Q8IWY8 852 aaPredicted RBP15.23■□□□□ 0.03
HDAC3-204ENST00000469207 ZNF384Q8TF68 577 aa15.23■□□□□ 0.03
HDAC3-204ENST00000469207 GCC1Q96CN9 775 aa15.23■□□□□ 0.03
HDAC3-204ENST00000469207 NEUROD6Q96NK8 337 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms