RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 TMED8Q6PL24 325 aaPredicted RBP4.35□□□□□ -1.71
TRIM59-202ENST00000468542 OLFM4Q6UX06 510 aa4.35□□□□□ -1.71
TRIM59-202ENST00000468542 TRIM67Q6ZTA4 783 aa4.35□□□□□ -1.71
TRIM59-202ENST00000468542 ZNF804AQ7Z570 1209 aa4.35□□□□□ -1.71
TRIM59-202ENST00000468542 NIM1KQ8IY84 436 aa4.35□□□□□ -1.71
TRIM59-202ENST00000468542 AGBL3Q8NEM8 1001 aa4.35□□□□□ -1.71
TRIM59-202ENST00000468542 DPF2Q92785 391 aa4.35□□□□□ -1.71
TRIM59-202ENST00000468542 ZNF512BQ96KM6 892 aaPredicted RBP4.35□□□□□ -1.71
TRIM59-202ENST00000468542 CCDC85AQ96PX6 553 aaPredicted RBP4.35□□□□□ -1.71
TRIM59-202ENST00000468542 ZNF277Q9NRM2 450 aaPredicted RBP4.35□□□□□ -1.71
TRIM59-202ENST00000468542 STK17AQ9UEE5 414 aa4.35□□□□□ -1.71
TRIM59-202ENST00000468542 KDM2BQ8NHM5 1336 aa4.35□□□□□ -1.71
TRIM59-202ENST00000468542 MYO3BQ8WXR4 1341 aa4.35□□□□□ -1.71
TRIM59-202ENST00000468542 PAPPA2Q9BXP8 1791 aa4.35□□□□□ -1.71
TRIM59-202ENST00000468542 FOCADQ5VW36 1801 aa4.35□□□□□ -1.71
TRIM59-202ENST00000468542 CDK5RAP2Q96SN8 1893 aa4.35□□□□□ -1.71
TRIM59-202ENST00000468542 MYH7P12883 1935 aa4.34□□□□□ -1.71
TRIM59-202ENST00000468542 SURF6O75683 361 aaKnown RBP4.34□□□□□ -1.71
TRIM59-202ENST00000468542 SASH1O94885 1247 aa4.34□□□□□ -1.71
TRIM59-202ENST00000468542 VIL1P09327 827 aaKnown RBP4.34□□□□□ -1.71
TRIM59-202ENST00000468542 SLC5A1P13866 664 aa4.34□□□□□ -1.71
TRIM59-202ENST00000468542 YY1P25490 414 aa4.34□□□□□ -1.71
TRIM59-202ENST00000468542 SLC4A3P48751 1232 aa4.34□□□□□ -1.71
TRIM59-202ENST00000468542 EIF6P56537 245 aaKnown RBP4.34□□□□□ -1.71
TRIM59-202ENST00000468542 G3BP1Q13283 466 aaKnown RBP eCLIP4.34□□□□□ -1.71
TRIM59-202ENST00000468542 ATP2B3Q16720 1220 aa4.34□□□□□ -1.71
TRIM59-202ENST00000468542 AOC3Q16853 763 aa4.34□□□□□ -1.71
TRIM59-202ENST00000468542 LRRC24Q50LG9 513 aa4.34□□□□□ -1.71
TRIM59-202ENST00000468542 ERICH6BQ5W0A0 696 aa4.34□□□□□ -1.71
TRIM59-202ENST00000468542 PADI6Q6TGC4 694 aa4.34□□□□□ -1.71
TRIM59-202ENST00000468542 FBXO33Q7Z6M2 555 aa4.34□□□□□ -1.71
TRIM59-202ENST00000468542 SIRT2Q8IXJ6 389 aa4.34□□□□□ -1.71
TRIM59-202ENST00000468542 TDRD7Q8NHU6 1098 aaKnown RBP4.34□□□□□ -1.71
TRIM59-202ENST00000468542 KLHDC4Q8TBB5 520 aa4.34□□□□□ -1.71
TRIM59-202ENST00000468542 TBC1D22AQ8WUA7 517 aa4.34□□□□□ -1.71
TRIM59-202ENST00000468542 GCC1Q96CN9 775 aa4.34□□□□□ -1.71
TRIM59-202ENST00000468542 KIF1BPQ96EK5 621 aa4.34□□□□□ -1.71
TRIM59-202ENST00000468542 ZNF594Q96JF6 807 aaPredicted RBP4.34□□□□□ -1.71
TRIM59-202ENST00000468542 PUS3Q9BZE2 481 aaKnown RBP4.34□□□□□ -1.71
TRIM59-202ENST00000468542 DCTPP1Q9H773 170 aa4.34□□□□□ -1.71
TRIM59-202ENST00000468542 GNL3LQ9NVN8 582 aaKnown RBP4.34□□□□□ -1.71
TRIM59-202ENST00000468542 WWC3Q9ULE0 1092 aa4.34□□□□□ -1.71
TRIM59-202ENST00000468542 SUGT1Q9Y2Z0 365 aa4.34□□□□□ -1.71
TRIM59-202ENST00000468542 SUPT16HQ9Y5B9 1047 aaKnown RBP4.34□□□□□ -1.71
TRIM59-202ENST00000468542 MYO5AQ9Y4I1 1855 aaKnown RBP4.34□□□□□ -1.71
TRIM59-202ENST00000468542 MAST2Q6P0Q8 1798 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 FAM205AQ6ZU69 1335 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 SALL1Q9NSC2 1324 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 A0A1B0GUL7 405 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 USP17L3A6NCW0 530 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 USP17L4A6NCW7 530 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 YDJCA8MPS7 323 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 ECE2O60344 883 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 TAF5LO75529 589 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 VEGFAP15692 232 aaPredicted RBP4.33□□□□□ -1.72
TRIM59-202ENST00000468542 HIBADHP31937 336 aaKnown RBP4.33□□□□□ -1.72
TRIM59-202ENST00000468542 CXCL9Q07325 125 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 CIAPIN1Q6FI81 312 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 USP17L1Q7RTZ2 530 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 PNMA8AQ86V59 439 aaPredicted RBP4.33□□□□□ -1.72
TRIM59-202ENST00000468542 TXNRD3Q86VQ6 643 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 TICAM2Q86XR7 235 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 CLASRPQ8N2M8 674 aaKnown RBP4.33□□□□□ -1.72
TRIM59-202ENST00000468542 RHPN1Q8TCX5 695 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 ZC3H15Q8WU90 426 aaKnown RBP4.33□□□□□ -1.72
TRIM59-202ENST00000468542 FAM84BQ96KN1 310 aaPredicted RBP4.33□□□□□ -1.72
TRIM59-202ENST00000468542 CRBNQ96SW2 442 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 GMLQ99445 158 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 MRIQ9BWK5 157 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 C1orf115Q9H7X2 142 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 GPBP1L1Q9HC44 474 aaPredicted RBP4.33□□□□□ -1.72
TRIM59-202ENST00000468542 CD209Q9NNX6 404 aa4.33□□□□□ -1.72
TRIM59-202ENST00000468542 PA2G4Q9UQ80 394 aaKnown RBP4.33□□□□□ -1.72
TRIM59-202ENST00000468542 THSD7BQ9C0I4 1608 aa4.32□□□□□ -1.72
TRIM59-202ENST00000468542 MAST3O60307 1309 aa4.32□□□□□ -1.72
TRIM59-202ENST00000468542 ZNF541Q9H0D2 1346 aa4.32□□□□□ -1.72
TRIM59-202ENST00000468542 UQCRFS1P1P0C7P4 283 aa4.32□□□□□ -1.72
TRIM59-202ENST00000468542 KLRK1P26718 216 aa4.32□□□□□ -1.72
TRIM59-202ENST00000468542 ARID4AP29374 1257 aaPredicted RBP4.32□□□□□ -1.72
TRIM59-202ENST00000468542 SCNN1DP51172 638 aa4.32□□□□□ -1.72
TRIM59-202ENST00000468542 ZNF280AP59817 542 aaPredicted RBP4.32□□□□□ -1.72
TRIM59-202ENST00000468542 HDLBPQ00341 1268 aaKnown RBP4.32□□□□□ -1.72
TRIM59-202ENST00000468542 TFCP2Q12800 502 aa4.32□□□□□ -1.72
TRIM59-202ENST00000468542 OS9Q13438 667 aaPredicted RBP4.32□□□□□ -1.72
TRIM59-202ENST00000468542 TNNI3KQ59H18 835 aa4.32□□□□□ -1.72
TRIM59-202ENST00000468542 CCDC158Q5M9N0 1113 aa4.32□□□□□ -1.72
TRIM59-202ENST00000468542 DACT2Q5SW24 774 aa4.32□□□□□ -1.72
TRIM59-202ENST00000468542 CCDC102BQ68D86 513 aa4.32□□□□□ -1.72
TRIM59-202ENST00000468542 TTLL5Q6EMB2 1281 aa4.32□□□□□ -1.72
TRIM59-202ENST00000468542 RSBN1LQ6PCB5 846 aaPredicted RBP4.32□□□□□ -1.72
TRIM59-202ENST00000468542 USP50Q70EL3 339 aaPredicted RBP4.32□□□□□ -1.72
TRIM59-202ENST00000468542 SLC51AQ86UW1 340 aa4.32□□□□□ -1.72
TRIM59-202ENST00000468542 VPS37DQ86XT2 251 aa4.32□□□□□ -1.72
TRIM59-202ENST00000468542 SMC5Q8IY18 1101 aa4.32□□□□□ -1.72
TRIM59-202ENST00000468542 OGFOD1Q8N543 542 aa4.32□□□□□ -1.72
TRIM59-202ENST00000468542 ZGPATQ8N5A5 531 aaKnown RBP4.32□□□□□ -1.72
TRIM59-202ENST00000468542 ZNF784Q8NCA9 323 aaPredicted RBP4.32□□□□□ -1.72
TRIM59-202ENST00000468542 HELBQ8NG08 1087 aaPredicted RBP4.32□□□□□ -1.72
TRIM59-202ENST00000468542 WDR66Q8TBY9 1149 aa4.32□□□□□ -1.72
TRIM59-202ENST00000468542 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms