RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 IFIT1P09914 478 aaKnown RBP16.42■□□□□ 0.22
PTPN7-207ENST00000468385 PPATQ06203 517 aa16.42■□□□□ 0.22
PTPN7-207ENST00000468385 PUM3Q15397 648 aaKnown RBP16.42■□□□□ 0.22
PTPN7-207ENST00000468385 DCAF15Q66K64 600 aa16.42■□□□□ 0.22
PTPN7-207ENST00000468385 MIGA2Q7L4E1 593 aa16.42■□□□□ 0.22
PTPN7-207ENST00000468385 FAM9BQ8IZU0 186 aa16.42■□□□□ 0.22
PTPN7-207ENST00000468385 ZNF341Q9BYN7 854 aa16.42■□□□□ 0.22
PTPN7-207ENST00000468385 USP44Q9H0E7 712 aa16.42■□□□□ 0.22
PTPN7-207ENST00000468385 PTPRCP08575 1304 aa16.42■□□□□ 0.22
PTPN7-207ENST00000468385 MYCP01106 439 aaPredicted RBP16.41■□□□□ 0.22
PTPN7-207ENST00000468385 INPP5BP32019 993 aa16.41■□□□□ 0.22
PTPN7-207ENST00000468385 RFX5P48382 616 aaPredicted RBP16.41■□□□□ 0.22
PTPN7-207ENST00000468385 KIF22Q14807 665 aa16.41■□□□□ 0.22
PTPN7-207ENST00000468385 C17orf99Q6UX52 265 aa16.41■□□□□ 0.22
PTPN7-207ENST00000468385 GNRH1P01148 92 aa16.4■□□□□ 0.22
PTPN7-207ENST00000468385 CTGFP29279 349 aa16.4■□□□□ 0.22
PTPN7-207ENST00000468385 FXR1P51114 621 aaKnown RBP eCLIP16.4■□□□□ 0.22
PTPN7-207ENST00000468385 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.4■□□□□ 0.22
PTPN7-207ENST00000468385 FAM151AQ8WW52 585 aa16.4■□□□□ 0.22
PTPN7-207ENST00000468385 ZNF112Q9UJU3 913 aa16.4■□□□□ 0.22
PTPN7-207ENST00000468385 EYA2O00167 538 aa16.39■□□□□ 0.21
PTPN7-207ENST00000468385 PRMT2P55345 433 aa16.39■□□□□ 0.21
PTPN7-207ENST00000468385 ANKRD23Q86SG2 305 aa16.39■□□□□ 0.21
PTPN7-207ENST00000468385 WDR66Q8TBY9 1149 aa16.39■□□□□ 0.21
PTPN7-207ENST00000468385 LPIN2Q92539 896 aa16.39■□□□□ 0.21
PTPN7-207ENST00000468385 CPA4Q9UI42 421 aa16.39■□□□□ 0.21
PTPN7-207ENST00000468385 KCNH4Q9UQ05 1017 aa16.39■□□□□ 0.21
PTPN7-207ENST00000468385 COLQQ9Y215 455 aaPredicted RBP16.39■□□□□ 0.21
PTPN7-207ENST00000468385 DAGLAQ9Y4D2 1042 aa16.39■□□□□ 0.21
PTPN7-207ENST00000468385 ADGRA2Q96PE1 1338 aa16.39■□□□□ 0.21
PTPN7-207ENST00000468385 ECM2O94769 699 aaPredicted RBP16.38■□□□□ 0.21
PTPN7-207ENST00000468385 SLC5A1P13866 664 aa16.38■□□□□ 0.21
PTPN7-207ENST00000468385 TCP10Q12799 353 aa16.38■□□□□ 0.21
PTPN7-207ENST00000468385 NFIAQ12857 509 aa16.38■□□□□ 0.21
PTPN7-207ENST00000468385 MOGSQ13724 837 aa16.38■□□□□ 0.21
PTPN7-207ENST00000468385 DIXDC1Q155Q3 683 aa16.38■□□□□ 0.21
PTPN7-207ENST00000468385 CDC42EP5Q6NZY7 148 aa16.38■□□□□ 0.21
PTPN7-207ENST00000468385 SSH1Q8WYL5 1049 aa16.38■□□□□ 0.21
PTPN7-207ENST00000468385 PDHXO00330 501 aa16.37■□□□□ 0.21
PTPN7-207ENST00000468385 PRDX5P30044 214 aa16.37■□□□□ 0.21
PTPN7-207ENST00000468385 MTFR1Q15390 333 aa16.37■□□□□ 0.21
PTPN7-207ENST00000468385 NOL9Q5SY16 702 aaKnown RBP16.37■□□□□ 0.21
PTPN7-207ENST00000468385 ATG9AQ7Z3C6 839 aa16.37■□□□□ 0.21
PTPN7-207ENST00000468385 SHISA4Q96DD7 197 aa16.37■□□□□ 0.21
PTPN7-207ENST00000468385 TRIM47Q96LD4 638 aa16.37■□□□□ 0.21
PTPN7-207ENST00000468385 SRRDQ9UH36 339 aa16.37■□□□□ 0.21
PTPN7-207ENST00000468385 OSBPP22059 807 aa16.36■□□□□ 0.21
PTPN7-207ENST00000468385 PSMC4P43686 418 aa16.36■□□□□ 0.21
PTPN7-207ENST00000468385 FAM198AQ9UFP1 575 aa16.36■□□□□ 0.21
PTPN7-207ENST00000468385 MYH13Q9UKX3 1938 aa16.36■□□□□ 0.21
PTPN7-207ENST00000468385 H0YGN5 161 aa16.35■□□□□ 0.21
PTPN7-207ENST00000468385 ZEB1P37275 1124 aaPredicted RBP16.35■□□□□ 0.21
PTPN7-207ENST00000468385 GPAT2Q6NUI2 795 aa16.34■□□□□ 0.21
PTPN7-207ENST00000468385 ZFPM1Q8IX07 1006 aa16.34■□□□□ 0.21
PTPN7-207ENST00000468385 USP40Q9NVE5 1235 aa16.34■□□□□ 0.21
PTPN7-207ENST00000468385 ATRNL1Q5VV63 1379 aa16.34■□□□□ 0.21
PTPN7-207ENST00000468385 E9PSI1 815 aa16.33■□□□□ 0.2
PTPN7-207ENST00000468385 FMNL1O95466 1100 aaPredicted RBP16.33■□□□□ 0.2
PTPN7-207ENST00000468385 LDHBP07195 334 aaKnown RBP16.33■□□□□ 0.2
PTPN7-207ENST00000468385 BCRP11274 1271 aa16.33■□□□□ 0.2
PTPN7-207ENST00000468385 HOXD10P28358 340 aa16.33■□□□□ 0.2
PTPN7-207ENST00000468385 GRK4P32298 578 aa16.33■□□□□ 0.2
PTPN7-207ENST00000468385 ATP2B3Q16720 1220 aa16.33■□□□□ 0.2
PTPN7-207ENST00000468385 RAET1EQ8TD07 263 aa16.33■□□□□ 0.2
PTPN7-207ENST00000468385 FBXO3Q9UK99 471 aa16.33■□□□□ 0.2
PTPN7-207ENST00000468385 MYPNQ86TC9 1320 aa16.33■□□□□ 0.2
PTPN7-207ENST00000468385 SALL1Q9NSC2 1324 aa16.33■□□□□ 0.2
PTPN7-207ENST00000468385 ZNF316A6NFI3 1004 aaPredicted RBP16.32■□□□□ 0.2
PTPN7-207ENST00000468385 CXCL11O14625 94 aa16.32■□□□□ 0.2
PTPN7-207ENST00000468385 CIAO1O76071 339 aa16.32■□□□□ 0.2
PTPN7-207ENST00000468385 CYP2C8P10632 490 aa16.32■□□□□ 0.2
PTPN7-207ENST00000468385 PARK7Q99497 189 aaKnown RBP16.32■□□□□ 0.2
PTPN7-207ENST00000468385 SIL1Q9H173 461 aa16.32■□□□□ 0.2
PTPN7-207ENST00000468385 PHF20L1A8MW92 1017 aa16.31■□□□□ 0.2
PTPN7-207ENST00000468385 PHKA1P46020 1223 aa16.31■□□□□ 0.2
PTPN7-207ENST00000468385 GJA8P48165 433 aa16.31■□□□□ 0.2
PTPN7-207ENST00000468385 PRKCZQ05513 592 aa16.31■□□□□ 0.2
PTPN7-207ENST00000468385 SLFN5Q08AF3 891 aa16.31■□□□□ 0.2
PTPN7-207ENST00000468385 ALDH1L2Q3SY69 923 aa16.31■□□□□ 0.2
PTPN7-207ENST00000468385 UBE2Q1Q7Z7E8 422 aa16.31■□□□□ 0.2
PTPN7-207ENST00000468385 IDI2Q9BXS1 227 aa16.31■□□□□ 0.2
PTPN7-207ENST00000468385 GNL3LQ9NVN8 582 aaKnown RBP16.31■□□□□ 0.2
PTPN7-207ENST00000468385 CEP126Q9P2H0 1117 aa16.31■□□□□ 0.2
PTPN7-207ENST00000468385 DENND2AQ9ULE3 1009 aa16.31■□□□□ 0.2
PTPN7-207ENST00000468385 SZT2Q5T011 3432 aa16.31■□□□□ 0.2
PTPN7-207ENST00000468385 AK9Q5TCS8 1911 aa16.31■□□□□ 0.2
PTPN7-207ENST00000468385 RFX7Q2KHR2 1363 aa16.3■□□□□ 0.2
PTPN7-207ENST00000468385 GAKO14976 1311 aa16.3■□□□□ 0.2
PTPN7-207ENST00000468385 A0A0G2JLL6 359 aaPredicted RBP16.3■□□□□ 0.2
PTPN7-207ENST00000468385 SEMA3EO15041 775 aa16.3■□□□□ 0.2
PTPN7-207ENST00000468385 GJB1P08034 283 aa16.3■□□□□ 0.2
PTPN7-207ENST00000468385 CCL5P13501 91 aa16.3■□□□□ 0.2
PTPN7-207ENST00000468385 RGS3P49796 1198 aa16.3■□□□□ 0.2
PTPN7-207ENST00000468385 FCGRTP55899 365 aa16.3■□□□□ 0.2
PTPN7-207ENST00000468385 CHRDL2Q6WN34 429 aa16.3■□□□□ 0.2
PTPN7-207ENST00000468385 SH3BP5LQ7L8J4 393 aa16.3■□□□□ 0.2
PTPN7-207ENST00000468385 PRRT2Q7Z6L0 340 aaPredicted RBP16.3■□□□□ 0.2
PTPN7-207ENST00000468385 SCYL3Q8IZE3 742 aa16.3■□□□□ 0.2
PTPN7-207ENST00000468385 NKX2-3Q8TAU0 364 aa16.3■□□□□ 0.2
PTPN7-207ENST00000468385 ENTPD3O75355 529 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms