RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 FAM163AQ96GL9 167 aaPredicted RBP8.23□□□□□ -1.09
SCAF4-204ENST00000467731 ARMT1Q9H993 441 aa8.23□□□□□ -1.09
SCAF4-204ENST00000467731 ANO2Q9NQ90 1003 aa8.23□□□□□ -1.09
SCAF4-204ENST00000467731 DAGLAQ9Y4D2 1042 aa8.23□□□□□ -1.09
SCAF4-204ENST00000467731 PCDHAC2Q9Y5I4 1007 aa8.23□□□□□ -1.09
SCAF4-204ENST00000467731 GAKO14976 1311 aa8.23□□□□□ -1.09
SCAF4-204ENST00000467731 MAGEB6P1A0A0J9YX57 407 aa8.22□□□□□ -1.09
SCAF4-204ENST00000467731 SHTN1A0MZ66 631 aa8.22□□□□□ -1.09
SCAF4-204ENST00000467731 RRP9O43818 475 aaKnown RBP8.22□□□□□ -1.09
SCAF4-204ENST00000467731 LDHCP07864 332 aa8.22□□□□□ -1.09
SCAF4-204ENST00000467731 USP17L8P0C7I0 530 aa8.22□□□□□ -1.09
SCAF4-204ENST00000467731 BTDP43251 543 aa8.22□□□□□ -1.09
SCAF4-204ENST00000467731 GMPSP49915 693 aaPredicted RBP8.22□□□□□ -1.09
SCAF4-204ENST00000467731 RBM5P52756 815 aaKnown RBP eCLIP8.22□□□□□ -1.09
SCAF4-204ENST00000467731 VPS53Q5VIR6 699 aa8.22□□□□□ -1.09
SCAF4-204ENST00000467731 HHIPL2Q6UWX4 724 aa8.22□□□□□ -1.09
SCAF4-204ENST00000467731 SERPINA10Q9UK55 444 aa8.22□□□□□ -1.09
SCAF4-204ENST00000467731 FOCADQ5VW36 1801 aa8.22□□□□□ -1.09
SCAF4-204ENST00000467731 DDNO94850 711 aaPredicted RBP8.22□□□□□ -1.09
SCAF4-204ENST00000467731 REC8O95072 547 aa8.22□□□□□ -1.09
SCAF4-204ENST00000467731 RPS12P25398 132 aaKnown RBP8.22□□□□□ -1.09
SCAF4-204ENST00000467731 HDLBPQ00341 1268 aaKnown RBP8.22□□□□□ -1.09
SCAF4-204ENST00000467731 HDAC9Q9UKV0 1011 aa8.22□□□□□ -1.09
SCAF4-204ENST00000467731 GPR75-ASB3A0A0A6YYF3 556 aa8.22□□□□□ -1.09
SCAF4-204ENST00000467731 DCAF8L1A6NGE4 600 aa8.22□□□□□ -1.09
SCAF4-204ENST00000467731 BAG3O95817 575 aa8.22□□□□□ -1.09
SCAF4-204ENST00000467731 HSPD1P10809 573 aaKnown RBP8.22□□□□□ -1.09
SCAF4-204ENST00000467731 PTH1RQ03431 593 aa8.22□□□□□ -1.09
SCAF4-204ENST00000467731 APOBEC3HQ6NTF7 200 aaKnown RBP8.22□□□□□ -1.09
SCAF4-204ENST00000467731 KIAA1211Q6ZU35 1233 aa8.22□□□□□ -1.09
SCAF4-204ENST00000467731 DPF2Q92785 391 aa8.22□□□□□ -1.09
SCAF4-204ENST00000467731 STRBPQ96SI9 672 aaKnown RBP8.22□□□□□ -1.09
SCAF4-204ENST00000467731 MRIQ9BWK5 157 aa8.22□□□□□ -1.09
SCAF4-204ENST00000467731 LSG1Q9H089 658 aaKnown RBP8.22□□□□□ -1.09
SCAF4-204ENST00000467731 FOXP2O15409 715 aa8.21□□□□□ -1.09
SCAF4-204ENST00000467731 PRKAB2O43741 272 aa8.21□□□□□ -1.09
SCAF4-204ENST00000467731 CFAP100Q494V2 611 aa8.21□□□□□ -1.09
SCAF4-204ENST00000467731 MICALL2Q8IY33 904 aa8.21□□□□□ -1.09
SCAF4-204ENST00000467731 SDR42E1Q8WUS8 393 aa8.21□□□□□ -1.09
SCAF4-204ENST00000467731 ZDHHC15Q96MV8 337 aa8.21□□□□□ -1.09
SCAF4-204ENST00000467731 NOL10Q9BSC4 688 aaKnown RBP8.21□□□□□ -1.09
SCAF4-204ENST00000467731 ZC3H4Q9UPT8 1303 aaKnown RBP8.21□□□□□ -1.1
SCAF4-204ENST00000467731 PPP4CP60510 307 aa8.21□□□□□ -1.1
SCAF4-204ENST00000467731 DPY19L2Q6NUT2 758 aa8.21□□□□□ -1.1
SCAF4-204ENST00000467731 SH3RF3Q8TEJ3 882 aaPredicted RBP8.21□□□□□ -1.1
SCAF4-204ENST00000467731 MYOZ2Q9NPC6 264 aa8.21□□□□□ -1.1
SCAF4-204ENST00000467731 CNOT7Q9UIV1 285 aaKnown RBP8.21□□□□□ -1.1
SCAF4-204ENST00000467731 MYH1P12882 1939 aa8.21□□□□□ -1.1
SCAF4-204ENST00000467731 NAV1Q8NEY1 1877 aa8.2□□□□□ -1.1
SCAF4-204ENST00000467731 EGFRP00533 1210 aa8.2□□□□□ -1.1
SCAF4-204ENST00000467731 RHBDL3P58872 404 aa8.2□□□□□ -1.1
SCAF4-204ENST00000467731 HSP90AA2PQ14568 343 aaPredicted RBP8.2□□□□□ -1.1
SCAF4-204ENST00000467731 PRMT6Q96LA8 375 aaPredicted RBP8.2□□□□□ -1.1
SCAF4-204ENST00000467731 USP26Q9BXU7 913 aa8.2□□□□□ -1.1
SCAF4-204ENST00000467731 GPRC5DQ9NZD1 345 aa8.2□□□□□ -1.1
SCAF4-204ENST00000467731 SLC4A4Q9Y6R1 1079 aa8.2□□□□□ -1.1
SCAF4-204ENST00000467731 SPDYE2BA6NHP3 402 aa8.2□□□□□ -1.1
SCAF4-204ENST00000467731 GSG1L2A8MUP6 293 aa8.2□□□□□ -1.1
SCAF4-204ENST00000467731 APPP05067 770 aa8.2□□□□□ -1.1
SCAF4-204ENST00000467731 SPDYE6P0CI01 402 aa8.2□□□□□ -1.1
SCAF4-204ENST00000467731 GNAT2P19087 354 aa8.2□□□□□ -1.1
SCAF4-204ENST00000467731 ZNF280AP59817 542 aaPredicted RBP8.2□□□□□ -1.1
SCAF4-204ENST00000467731 DLGAP5Q15398 846 aa8.2□□□□□ -1.1
SCAF4-204ENST00000467731 CERS3Q8IU89 383 aa8.2□□□□□ -1.1
SCAF4-204ENST00000467731 MAP4K1Q92918 833 aa8.2□□□□□ -1.1
SCAF4-204ENST00000467731 DSCC1Q9BVC3 393 aa8.2□□□□□ -1.1
SCAF4-204ENST00000467731 CRNKL1Q9BZJ0 848 aaKnown RBP8.2□□□□□ -1.1
SCAF4-204ENST00000467731 EPB41L4AQ9HCS5 686 aaPredicted RBP8.2□□□□□ -1.1
SCAF4-204ENST00000467731 POLR2AP24928 1970 aaKnown RBP8.2□□□□□ -1.1
SCAF4-204ENST00000467731 PATL2C9JE40 543 aaKnown RBP8.19□□□□□ -1.1
SCAF4-204ENST00000467731 WNT10BO00744 389 aa8.19□□□□□ -1.1
SCAF4-204ENST00000467731 PLCG2P16885 1265 aa8.19□□□□□ -1.1
SCAF4-204ENST00000467731 EPS15P42566 896 aa8.19□□□□□ -1.1
SCAF4-204ENST00000467731 CDC42EP5Q6NZY7 148 aa8.19□□□□□ -1.1
SCAF4-204ENST00000467731 SAMD7Q7Z3H4 446 aa8.19□□□□□ -1.1
SCAF4-204ENST00000467731 TGFBRAP1Q8WUH2 860 aa8.19□□□□□ -1.1
SCAF4-204ENST00000467731 TDRD3Q9H7E2 651 aaKnown RBP8.19□□□□□ -1.1
SCAF4-204ENST00000467731 UPF2Q9HAU5 1272 aaKnown RBP8.19□□□□□ -1.1
SCAF4-204ENST00000467731 GLTPD2A6NH11 291 aa8.19□□□□□ -1.1
SCAF4-204ENST00000467731 FGAP02671 866 aa8.19□□□□□ -1.1
SCAF4-204ENST00000467731 MMP14P50281 582 aa8.19□□□□□ -1.1
SCAF4-204ENST00000467731 NBPF9Q3BBW0 867 aa8.19□□□□□ -1.1
SCAF4-204ENST00000467731 TBC1D10BQ4KMP7 808 aaPredicted RBP8.19□□□□□ -1.1
SCAF4-204ENST00000467731 RBM26Q5T8P6 1007 aaKnown RBP8.19□□□□□ -1.1
SCAF4-204ENST00000467731 TEX11Q8IYF3 940 aa8.19□□□□□ -1.1
SCAF4-204ENST00000467731 IFNL3Q8IZI9 196 aa8.19□□□□□ -1.1
SCAF4-204ENST00000467731 MTMR14Q8NCE2 650 aa8.19□□□□□ -1.1
SCAF4-204ENST00000467731 USP40Q9NVE5 1235 aa8.19□□□□□ -1.1
SCAF4-204ENST00000467731 RBM8AQ9Y5S9 174 aaKnown RBP8.19□□□□□ -1.1
SCAF4-204ENST00000467731 SCN4AP35499 1836 aa8.19□□□□□ -1.1
SCAF4-204ENST00000467731 LAMA4Q16363 1823 aa8.19□□□□□ -1.1
SCAF4-204ENST00000467731 DDX60LQ5H9U9 1706 aaKnown RBP8.19□□□□□ -1.1
SCAF4-204ENST00000467731 H7C1D1 291 aa8.19□□□□□ -1.1
SCAF4-204ENST00000467731 WDHD1O75717 1129 aaPredicted RBP8.19□□□□□ -1.1
SCAF4-204ENST00000467731 CACNB3P54284 484 aa8.19□□□□□ -1.1
SCAF4-204ENST00000467731 DCP1AQ9NPI6 582 aaPredicted RBP8.19□□□□□ -1.1
SCAF4-204ENST00000467731 LAMB1P07942 1786 aa8.19□□□□□ -1.1
SCAF4-204ENST00000467731 EPB41L2O43491 1005 aaKnown RBP8.18□□□□□ -1.1
SCAF4-204ENST00000467731 LMOD1P29536 600 aaPredicted RBP8.18□□□□□ -1.1
SCAF4-204ENST00000467731 USP5P45974 858 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms