RNA–Protein interactions for RNA: ENST00000467465.1

HLA-DOA-203, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-203ENST00000467465 TRPA1O75762 1119 aa11.88□□□□□ -0.51
HLA-DOA-203ENST00000467465 PRKG1Q13976 671 aa11.88□□□□□ -0.51
HLA-DOA-203ENST00000467465 CCDC158Q5M9N0 1113 aa11.88□□□□□ -0.51
HLA-DOA-203ENST00000467465 NBPF12Q5TAG4 269 aaPredicted RBP11.88□□□□□ -0.51
HLA-DOA-203ENST00000467465 APOBEC3HQ6NTF7 200 aaKnown RBP11.88□□□□□ -0.51
HLA-DOA-203ENST00000467465 DZIP1Q86YF9 867 aaKnown RBP11.88□□□□□ -0.51
HLA-DOA-203ENST00000467465 ZBTB40Q9NUA8 1239 aa11.88□□□□□ -0.51
HLA-DOA-203ENST00000467465 SAGE1Q9NXZ1 904 aa11.88□□□□□ -0.51
HLA-DOA-203ENST00000467465 ABCF2Q9UG63 623 aa11.88□□□□□ -0.51
HLA-DOA-203ENST00000467465 DAGLAQ9Y4D2 1042 aa11.88□□□□□ -0.51
HLA-DOA-203ENST00000467465 IGSF3O75054 1194 aa11.87□□□□□ -0.51
HLA-DOA-203ENST00000467465 TTC39AQ5SRH9 613 aa11.87□□□□□ -0.51
HLA-DOA-203ENST00000467465 PRPF38BQ5VTL8 546 aaKnown RBP11.87□□□□□ -0.51
HLA-DOA-203ENST00000467465 ERICH6Q7L0X2 663 aa11.87□□□□□ -0.51
HLA-DOA-203ENST00000467465 SPATA5Q8NB90 893 aa11.87□□□□□ -0.51
HLA-DOA-203ENST00000467465 SLC10A4Q96EP9 437 aa11.87□□□□□ -0.51
HLA-DOA-203ENST00000467465 TEPSINQ96N21 525 aa11.87□□□□□ -0.51
HLA-DOA-203ENST00000467465 RNF186Q9NXI6 227 aa11.87□□□□□ -0.51
HLA-DOA-203ENST00000467465 HMG20BQ9P0W2 317 aa11.87□□□□□ -0.51
HLA-DOA-203ENST00000467465 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.87□□□□□ -0.51
HLA-DOA-203ENST00000467465 DOCK2Q92608 1830 aa11.87□□□□□ -0.51
HLA-DOA-203ENST00000467465 GAKO14976 1311 aa11.86□□□□□ -0.51
HLA-DOA-203ENST00000467465 LDHCP07864 332 aa11.86□□□□□ -0.51
HLA-DOA-203ENST00000467465 GSTO1P78417 241 aa11.86□□□□□ -0.51
HLA-DOA-203ENST00000467465 SREBF2Q12772 1141 aa11.86□□□□□ -0.51
HLA-DOA-203ENST00000467465 DIXDC1Q155Q3 683 aa11.86□□□□□ -0.51
HLA-DOA-203ENST00000467465 ANKRD13AQ8IZ07 590 aa11.86□□□□□ -0.51
HLA-DOA-203ENST00000467465 FAM163AQ96GL9 167 aaPredicted RBP11.86□□□□□ -0.51
HLA-DOA-203ENST00000467465 ZNF512BQ96KM6 892 aaPredicted RBP11.86□□□□□ -0.51
HLA-DOA-203ENST00000467465 TMEM39BQ9GZU3 492 aa11.86□□□□□ -0.51
HLA-DOA-203ENST00000467465 CASP8AP2Q9UKL3 1982 aa11.85□□□□□ -0.51
HLA-DOA-203ENST00000467465 MYO5AQ9Y4I1 1855 aaKnown RBP11.85□□□□□ -0.51
HLA-DOA-203ENST00000467465 USP2O75604 605 aaPredicted RBP11.85□□□□□ -0.51
HLA-DOA-203ENST00000467465 MAP4K4O95819 1239 aaPredicted RBP11.85□□□□□ -0.51
HLA-DOA-203ENST00000467465 ZBTB48P10074 688 aaPredicted RBP11.85□□□□□ -0.51
HLA-DOA-203ENST00000467465 MCAMP43121 646 aa11.85□□□□□ -0.51
HLA-DOA-203ENST00000467465 CACNB3P54284 484 aa11.85□□□□□ -0.51
HLA-DOA-203ENST00000467465 DCAF15Q66K64 600 aa11.85□□□□□ -0.51
HLA-DOA-203ENST00000467465 CDC42EP5Q6NZY7 148 aa11.85□□□□□ -0.51
HLA-DOA-203ENST00000467465 FAM151AQ8WW52 585 aa11.85□□□□□ -0.51
HLA-DOA-203ENST00000467465 CSRNP1Q96S65 589 aa11.85□□□□□ -0.51
HLA-DOA-203ENST00000467465 DBNDD2Q9BQY9 259 aa11.85□□□□□ -0.51
HLA-DOA-203ENST00000467465 EXOC6BQ9Y2D4 811 aa11.85□□□□□ -0.51
HLA-DOA-203ENST00000467465 MROH7-TTC4A0A0A0MT08 1334 aa11.85□□□□□ -0.51
HLA-DOA-203ENST00000467465 RAB11FIP3O75154 756 aa11.84□□□□□ -0.51
HLA-DOA-203ENST00000467465 INHBEP58166 350 aa11.84□□□□□ -0.51
HLA-DOA-203ENST00000467465 SPRYD7Q5W111 196 aa11.84□□□□□ -0.51
HLA-DOA-203ENST00000467465 CTU1Q7Z7A3 348 aaKnown RBP11.84□□□□□ -0.51
HLA-DOA-203ENST00000467465 KIF1BPQ96EK5 621 aa11.84□□□□□ -0.51
HLA-DOA-203ENST00000467465 USP40Q9NVE5 1235 aa11.84□□□□□ -0.51
HLA-DOA-203ENST00000467465 LRP2BPQ9P2M1 347 aa11.84□□□□□ -0.51
HLA-DOA-203ENST00000467465 CSADQ9Y600 493 aa11.84□□□□□ -0.51
HLA-DOA-203ENST00000467465 MANSC4A6NHS7 340 aaPredicted RBP11.83□□□□□ -0.52
HLA-DOA-203ENST00000467465 TM4SF4P48230 202 aa11.83□□□□□ -0.52
HLA-DOA-203ENST00000467465 MECOMQ03112 1051 aa11.83□□□□□ -0.52
HLA-DOA-203ENST00000467465 C20orf194Q5TEA3 1177 aa11.83□□□□□ -0.52
HLA-DOA-203ENST00000467465 PI16Q6UXB8 463 aa11.83□□□□□ -0.52
HLA-DOA-203ENST00000467465 CLASRPQ8N2M8 674 aaKnown RBP11.83□□□□□ -0.52
HLA-DOA-203ENST00000467465 RHPN1Q8TCX5 695 aa11.83□□□□□ -0.52
HLA-DOA-203ENST00000467465 EAF2Q96CJ1 260 aaPredicted RBP11.83□□□□□ -0.52
HLA-DOA-203ENST00000467465 WNK4Q96J92 1243 aa11.83□□□□□ -0.52
HLA-DOA-203ENST00000467465 NOL10Q9BSC4 688 aaKnown RBP11.83□□□□□ -0.52
HLA-DOA-203ENST00000467465 IDI2Q9BXS1 227 aa11.83□□□□□ -0.52
HLA-DOA-203ENST00000467465 RAI14Q9P0K7 980 aa11.83□□□□□ -0.52
HLA-DOA-203ENST00000467465 DBNLQ9UJU6 430 aaKnown RBP11.83□□□□□ -0.52
HLA-DOA-203ENST00000467465 FZD1Q9UP38 647 aa11.83□□□□□ -0.52
HLA-DOA-203ENST00000467465 FOCADQ5VW36 1801 aa11.83□□□□□ -0.52
HLA-DOA-203ENST00000467465 GPR75-ASB3A0A0A6YYF3 556 aa11.82□□□□□ -0.52
HLA-DOA-203ENST00000467465 ENTPD3O75355 529 aa11.82□□□□□ -0.52
HLA-DOA-203ENST00000467465 ALDH1A1P00352 501 aa11.82□□□□□ -0.52
HLA-DOA-203ENST00000467465 BTDP43251 543 aa11.82□□□□□ -0.52
HLA-DOA-203ENST00000467465 MAP3K9P80192 1104 aa11.82□□□□□ -0.52
HLA-DOA-203ENST00000467465 PKN2Q16513 984 aaKnown RBP11.82□□□□□ -0.52
HLA-DOA-203ENST00000467465 TMED8Q6PL24 325 aaPredicted RBP11.82□□□□□ -0.52
HLA-DOA-203ENST00000467465 AACSQ86V21 672 aa11.82□□□□□ -0.52
HLA-DOA-203ENST00000467465 CDAN1Q8IWY9 1227 aa11.82□□□□□ -0.52
HLA-DOA-203ENST00000467465 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.82□□□□□ -0.52
HLA-DOA-203ENST00000467465 NSUN4Q96CB9 384 aaKnown RBP11.82□□□□□ -0.52
HLA-DOA-203ENST00000467465 CLMNQ96JQ2 1002 aa11.82□□□□□ -0.52
HLA-DOA-203ENST00000467465 ZNF341Q9BYN7 854 aa11.82□□□□□ -0.52
HLA-DOA-203ENST00000467465 CCDC8Q9H0W5 538 aaPredicted RBP11.82□□□□□ -0.52
HLA-DOA-203ENST00000467465 CDK5RAP2Q96SN8 1893 aa11.82□□□□□ -0.52
HLA-DOA-203ENST00000467465 RFX7Q2KHR2 1363 aa11.81□□□□□ -0.52
HLA-DOA-203ENST00000467465 NPM3O75607 178 aaKnown RBP11.81□□□□□ -0.52
HLA-DOA-203ENST00000467465 PLCG2P16885 1265 aa11.81□□□□□ -0.52
HLA-DOA-203ENST00000467465 TCP10Q12799 353 aa11.81□□□□□ -0.52
HLA-DOA-203ENST00000467465 NFIAQ12857 509 aa11.81□□□□□ -0.52
HLA-DOA-203ENST00000467465 MKRN3Q13064 507 aaKnown RBP11.81□□□□□ -0.52
HLA-DOA-203ENST00000467465 TBC1D9Q6ZT07 1266 aa11.81□□□□□ -0.52
HLA-DOA-203ENST00000467465 SIRT2Q8IXJ6 389 aa11.81□□□□□ -0.52
HLA-DOA-203ENST00000467465 YTHDC1Q96MU7 727 aaKnown RBP11.81□□□□□ -0.52
HLA-DOA-203ENST00000467465 WRNIP1Q96S55 665 aa11.81□□□□□ -0.52
HLA-DOA-203ENST00000467465 SNRKQ9NRH2 765 aa11.81□□□□□ -0.52
HLA-DOA-203ENST00000467465 FAM198AQ9UFP1 575 aa11.81□□□□□ -0.52
HLA-DOA-203ENST00000467465 HPS5Q9UPZ3 1129 aa11.81□□□□□ -0.52
HLA-DOA-203ENST00000467465 BAG3O95817 575 aa11.8□□□□□ -0.52
HLA-DOA-203ENST00000467465 CYP2E1P05181 493 aaPredicted RBP11.8□□□□□ -0.52
HLA-DOA-203ENST00000467465 IFIT2P09913 472 aaKnown RBP11.8□□□□□ -0.52
HLA-DOA-203ENST00000467465 ZAP70P43403 619 aa11.8□□□□□ -0.52
HLA-DOA-203ENST00000467465 RGS3P49796 1198 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms