RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 NFIAQ12857 509 aa12.5□□□□□ -0.41
CD40-204ENST00000466205 NOGQ13253 232 aa12.5□□□□□ -0.41
CD40-204ENST00000466205 SUPT20HL1Q3ZLR7 823 aa12.5□□□□□ -0.41
CD40-204ENST00000466205 CDC42EP5Q6NZY7 148 aa12.5□□□□□ -0.41
CD40-204ENST00000466205 CCDC102AQ96A19 550 aa12.5□□□□□ -0.41
CD40-204ENST00000466205 TEPSINQ96N21 525 aa12.5□□□□□ -0.41
CD40-204ENST00000466205 BEGAINQ9BUH8 593 aa12.5□□□□□ -0.41
CD40-204ENST00000466205 USP40Q9NVE5 1235 aa12.5□□□□□ -0.41
CD40-204ENST00000466205 BTDP43251 543 aa12.49□□□□□ -0.41
CD40-204ENST00000466205 ZAP70P43403 619 aa12.49□□□□□ -0.41
CD40-204ENST00000466205 ERC1Q8IUD2 1116 aa12.49□□□□□ -0.41
CD40-204ENST00000466205 CLMNQ96JQ2 1002 aa12.49□□□□□ -0.41
CD40-204ENST00000466205 CRBNQ96SW2 442 aa12.49□□□□□ -0.41
CD40-204ENST00000466205 CHMP4BQ9H444 224 aaKnown RBP12.49□□□□□ -0.41
CD40-204ENST00000466205 LRP2BPQ9P2M1 347 aa12.49□□□□□ -0.41
CD40-204ENST00000466205 PPP1R12BO60237 982 aaPredicted RBP12.48□□□□□ -0.41
CD40-204ENST00000466205 SMARCA5O60264 1052 aaPredicted RBP12.48□□□□□ -0.41
CD40-204ENST00000466205 USP2O75604 605 aaPredicted RBP12.48□□□□□ -0.41
CD40-204ENST00000466205 HSPA8P11142 646 aaKnown RBP12.48□□□□□ -0.41
CD40-204ENST00000466205 PICALMQ13492 652 aa12.48□□□□□ -0.41
CD40-204ENST00000466205 HSP90AB4PQ58FF6 505 aa12.48□□□□□ -0.41
CD40-204ENST00000466205 SPTY2D1Q68D10 685 aaPredicted RBP12.48□□□□□ -0.41
CD40-204ENST00000466205 MIGA2Q7L4E1 593 aa12.48□□□□□ -0.41
CD40-204ENST00000466205 ZNF384Q8TF68 577 aa12.48□□□□□ -0.41
CD40-204ENST00000466205 MRIQ9BWK5 157 aa12.48□□□□□ -0.41
CD40-204ENST00000466205 MROH7-TTC4A0A0A0MT08 1334 aa12.47□□□□□ -0.41
CD40-204ENST00000466205 PDS5AQ29RF7 1337 aaKnown RBP12.47□□□□□ -0.41
CD40-204ENST00000466205 CYP2E1P05181 493 aaPredicted RBP12.47□□□□□ -0.41
CD40-204ENST00000466205 CTCFP49711 727 aaPredicted RBP12.47□□□□□ -0.41
CD40-204ENST00000466205 ZFPM1Q8IX07 1006 aa12.47□□□□□ -0.41
CD40-204ENST00000466205 CLASRPQ8N2M8 674 aaKnown RBP12.47□□□□□ -0.41
CD40-204ENST00000466205 NSUN4Q96CB9 384 aaKnown RBP12.47□□□□□ -0.41
CD40-204ENST00000466205 KIF1BPQ96EK5 621 aa12.47□□□□□ -0.41
CD40-204ENST00000466205 ELP3Q9H9T3 547 aa12.47□□□□□ -0.41
CD40-204ENST00000466205 PIH1D3Q9NQM4 214 aaKnown RBP12.47□□□□□ -0.41
CD40-204ENST00000466205 FAM198AQ9UFP1 575 aa12.47□□□□□ -0.41
CD40-204ENST00000466205 MYH2Q9UKX2 1941 aa12.47□□□□□ -0.41
CD40-204ENST00000466205 GAKO14976 1311 aa12.46□□□□□ -0.41
CD40-204ENST00000466205 IFIT2P09913 472 aaKnown RBP12.46□□□□□ -0.41
CD40-204ENST00000466205 SLURP2P0DP57 97 aa12.46□□□□□ -0.41
CD40-204ENST00000466205 IREB2P48200 963 aaKnown RBP12.46□□□□□ -0.41
CD40-204ENST00000466205 LDLRAD1Q5T700 205 aa12.46□□□□□ -0.41
CD40-204ENST00000466205 CNKSR2Q8WXI2 1034 aa12.46□□□□□ -0.41
CD40-204ENST00000466205 SLC10A4Q96EP9 437 aa12.46□□□□□ -0.41
CD40-204ENST00000466205 CSRNP1Q96S65 589 aa12.46□□□□□ -0.41
CD40-204ENST00000466205 ANTXR1Q9H6X2 564 aa12.46□□□□□ -0.41
CD40-204ENST00000466205 TRPA1O75762 1119 aa12.45□□□□□ -0.42
CD40-204ENST00000466205 RGS3P49796 1198 aa12.45□□□□□ -0.42
CD40-204ENST00000466205 NAA16Q6N069 864 aaPredicted RBP12.45□□□□□ -0.42
CD40-204ENST00000466205 FAM83AQ86UY5 434 aa12.45□□□□□ -0.42
CD40-204ENST00000466205 ZSCAN29Q8IWY8 852 aaPredicted RBP12.45□□□□□ -0.42
CD40-204ENST00000466205 SLF2Q8IX21 1173 aa12.45□□□□□ -0.42
CD40-204ENST00000466205 FAM151AQ8WW52 585 aa12.45□□□□□ -0.42
CD40-204ENST00000466205 DNAJC2Q99543 621 aaKnown RBP12.45□□□□□ -0.42
CD40-204ENST00000466205 DDX4Q9NQI0 724 aaKnown RBP12.45□□□□□ -0.42
CD40-204ENST00000466205 AATFQ9NY61 560 aaKnown RBP eCLIP12.45□□□□□ -0.42
CD40-204ENST00000466205 OTOFQ9HC10 1997 aa12.45□□□□□ -0.42
CD40-204ENST00000466205 ZBTB22O15209 634 aa12.44□□□□□ -0.42
CD40-204ENST00000466205 RAB11FIP3O75154 756 aa12.44□□□□□ -0.42
CD40-204ENST00000466205 IDH1O75874 414 aaKnown RBP12.44□□□□□ -0.42
CD40-204ENST00000466205 GSTO1P78417 241 aa12.44□□□□□ -0.42
CD40-204ENST00000466205 VGLL4Q14135 290 aa12.44□□□□□ -0.42
CD40-204ENST00000466205 MAP3K11Q16584 847 aa12.44□□□□□ -0.42
CD40-204ENST00000466205 SPRYD7Q5W111 196 aa12.44□□□□□ -0.42
CD40-204ENST00000466205 ADGRA1Q86SQ6 560 aa12.44□□□□□ -0.42
CD40-204ENST00000466205 ANKRD13AQ8IZ07 590 aa12.44□□□□□ -0.42
CD40-204ENST00000466205 ZKSCAN4Q969J2 545 aaPredicted RBP12.44□□□□□ -0.42
CD40-204ENST00000466205 WNK4Q96J92 1243 aa12.44□□□□□ -0.42
CD40-204ENST00000466205 WRNIP1Q96S55 665 aa12.44□□□□□ -0.42
CD40-204ENST00000466205 RNF186Q9NXI6 227 aa12.44□□□□□ -0.42
CD40-204ENST00000466205 PCDHB15Q9Y5E8 787 aa12.44□□□□□ -0.42
CD40-204ENST00000466205 AKAP11Q9UKA4 1901 aa12.43□□□□□ -0.42
CD40-204ENST00000466205 GPR75-ASB3A0A0A6YYF3 556 aa12.43□□□□□ -0.42
CD40-204ENST00000466205 WDHD1O75717 1129 aaPredicted RBP12.43□□□□□ -0.42
CD40-204ENST00000466205 GJA5P36382 358 aa12.43□□□□□ -0.42
CD40-204ENST00000466205 RHBDL3P58872 404 aa12.43□□□□□ -0.42
CD40-204ENST00000466205 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.43□□□□□ -0.42
CD40-204ENST00000466205 SH3BP5LQ7L8J4 393 aa12.43□□□□□ -0.42
CD40-204ENST00000466205 TNS4Q8IZW8 715 aa12.43□□□□□ -0.42
CD40-204ENST00000466205 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.43□□□□□ -0.42
CD40-204ENST00000466205 SH3RF3Q8TEJ3 882 aaPredicted RBP12.43□□□□□ -0.42
CD40-204ENST00000466205 OPTNQ96CV9 577 aa12.43□□□□□ -0.42
CD40-204ENST00000466205 EDC3Q96F86 508 aaKnown RBP12.43□□□□□ -0.42
CD40-204ENST00000466205 ZNF512BQ96KM6 892 aaPredicted RBP12.43□□□□□ -0.42
CD40-204ENST00000466205 LRRCC1Q9C099 1032 aa12.43□□□□□ -0.42
CD40-204ENST00000466205 BOLA2Q9H3K6 86 aa12.43□□□□□ -0.42
CD40-204ENST00000466205 MAST2Q6P0Q8 1798 aa12.43□□□□□ -0.42
CD40-204ENST00000466205 MYO5AQ9Y4I1 1855 aaKnown RBP12.42□□□□□ -0.42
CD40-204ENST00000466205 DDTLA6NHG4 134 aaPredicted RBP12.42□□□□□ -0.42
CD40-204ENST00000466205 TBC1D8O95759 1140 aa12.42□□□□□ -0.42
CD40-204ENST00000466205 LDHCP07864 332 aa12.42□□□□□ -0.42
CD40-204ENST00000466205 CYP7A1P22680 504 aa12.42□□□□□ -0.42
CD40-204ENST00000466205 DYNLL1P63167 89 aaKnown RBP12.42□□□□□ -0.42
CD40-204ENST00000466205 MAP3K9P80192 1104 aa12.42□□□□□ -0.42
CD40-204ENST00000466205 SLC4A8Q2Y0W8 1093 aa12.42□□□□□ -0.42
CD40-204ENST00000466205 FKBP1CQ5VVH2 108 aa12.42□□□□□ -0.42
CD40-204ENST00000466205 TEX11Q8IYF3 940 aa12.42□□□□□ -0.42
CD40-204ENST00000466205 MAGEB6Q8N7X4 407 aa12.42□□□□□ -0.42
CD40-204ENST00000466205 MIGA1Q8NAN2 632 aa12.42□□□□□ -0.42
CD40-204ENST00000466205 OTUD5Q96G74 571 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms