RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 CELF1Q92879 486 aaKnown RBP7.29□□□□□ -1.24
CHMP3-206ENST00000466032 KIFC2Q96AC6 838 aa7.29□□□□□ -1.24
CHMP3-206ENST00000466032 CCDC85AQ96PX6 553 aaPredicted RBP7.29□□□□□ -1.24
CHMP3-206ENST00000466032 EYA3Q99504 573 aa7.29□□□□□ -1.24
CHMP3-206ENST00000466032 PUS3Q9BZE2 481 aaKnown RBP7.29□□□□□ -1.24
CHMP3-206ENST00000466032 SPON1Q9HCB6 807 aa7.29□□□□□ -1.24
CHMP3-206ENST00000466032 ANKIB1Q9P2G1 1089 aa7.29□□□□□ -1.24
CHMP3-206ENST00000466032 ATP6V0A2Q9Y487 856 aa7.29□□□□□ -1.24
CHMP3-206ENST00000466032 RBM19Q9Y4C8 960 aaKnown RBP7.29□□□□□ -1.24
CHMP3-206ENST00000466032 SRCAPQ6ZRS2 3230 aa7.28□□□□□ -1.24
CHMP3-206ENST00000466032 H3BM21 787 aa7.28□□□□□ -1.24
CHMP3-206ENST00000466032 PPEF1O14829 653 aaPredicted RBP7.28□□□□□ -1.24
CHMP3-206ENST00000466032 ARID4AP29374 1257 aaPredicted RBP7.28□□□□□ -1.24
CHMP3-206ENST00000466032 MFAP1P55081 439 aaKnown RBP7.28□□□□□ -1.24
CHMP3-206ENST00000466032 R3HDM1Q15032 1099 aaKnown RBP7.28□□□□□ -1.24
CHMP3-206ENST00000466032 MSL1Q68DK7 614 aa7.28□□□□□ -1.24
CHMP3-206ENST00000466032 SAMD7Q7Z3H4 446 aa7.28□□□□□ -1.24
CHMP3-206ENST00000466032 ZNF804AQ7Z570 1209 aa7.28□□□□□ -1.24
CHMP3-206ENST00000466032 RTKN2Q8IZC4 609 aa7.28□□□□□ -1.24
CHMP3-206ENST00000466032 ZGPATQ8N5A5 531 aaKnown RBP7.28□□□□□ -1.24
CHMP3-206ENST00000466032 TTLL6Q8N841 843 aa7.28□□□□□ -1.24
CHMP3-206ENST00000466032 PI4K2BQ8TCG2 481 aa7.28□□□□□ -1.24
CHMP3-206ENST00000466032 XAGE2Q96GT9 111 aa7.28□□□□□ -1.24
CHMP3-206ENST00000466032 HAUS7Q99871 368 aa7.28□□□□□ -1.24
CHMP3-206ENST00000466032 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.28□□□□□ -1.24
CHMP3-206ENST00000466032 CCDC8Q9H0W5 538 aaPredicted RBP7.28□□□□□ -1.24
CHMP3-206ENST00000466032 DBNLQ9UJU6 430 aaKnown RBP7.28□□□□□ -1.24
CHMP3-206ENST00000466032 GGA1Q9UJY5 639 aa7.28□□□□□ -1.24
CHMP3-206ENST00000466032 DENND2AQ9ULE3 1009 aa7.28□□□□□ -1.24
CHMP3-206ENST00000466032 DNMT3AQ9Y6K1 912 aaPredicted RBP7.28□□□□□ -1.24
CHMP3-206ENST00000466032 ZNF804BA4D1E1 1349 aa7.27□□□□□ -1.24
CHMP3-206ENST00000466032 SPEF2Q9C093 1822 aa7.27□□□□□ -1.25
CHMP3-206ENST00000466032 REC8O95072 547 aa7.27□□□□□ -1.25
CHMP3-206ENST00000466032 MMP14P50281 582 aa7.27□□□□□ -1.25
CHMP3-206ENST00000466032 TIMM10P62072 90 aa7.27□□□□□ -1.25
CHMP3-206ENST00000466032 CERS3Q8IU89 383 aa7.27□□□□□ -1.25
CHMP3-206ENST00000466032 C16orf71Q8IYS4 520 aaPredicted RBP7.27□□□□□ -1.25
CHMP3-206ENST00000466032 MPNDQ8N594 471 aa7.27□□□□□ -1.25
CHMP3-206ENST00000466032 ZNF622Q969S3 477 aaKnown RBP eCLIP7.27□□□□□ -1.25
CHMP3-206ENST00000466032 DBNDD2Q9BQY9 259 aa7.27□□□□□ -1.25
CHMP3-206ENST00000466032 BACH2Q9BYV9 841 aa7.27□□□□□ -1.25
CHMP3-206ENST00000466032 PIM2Q9P1W9 311 aa7.27□□□□□ -1.25
CHMP3-206ENST00000466032 RAD50Q92878 1312 aa7.27□□□□□ -1.25
CHMP3-206ENST00000466032 CASZ1Q86V15 1759 aa7.26□□□□□ -1.25
CHMP3-206ENST00000466032 MED23Q9ULK4 1368 aa7.26□□□□□ -1.25
CHMP3-206ENST00000466032 SDSP20132 328 aa7.26□□□□□ -1.25
CHMP3-206ENST00000466032 HIBADHP31937 336 aaKnown RBP7.26□□□□□ -1.25
CHMP3-206ENST00000466032 SPTY2D1Q68D10 685 aaPredicted RBP7.26□□□□□ -1.25
CHMP3-206ENST00000466032 CCDC102BQ68D86 513 aa7.26□□□□□ -1.25
CHMP3-206ENST00000466032 DPP8Q6V1X1 898 aaPredicted RBP7.26□□□□□ -1.25
CHMP3-206ENST00000466032 FBXO33Q7Z6M2 555 aa7.26□□□□□ -1.25
CHMP3-206ENST00000466032 Q8N3U1 123 aa7.26□□□□□ -1.25
CHMP3-206ENST00000466032 TBC1D22AQ8WUA7 517 aa7.26□□□□□ -1.25
CHMP3-206ENST00000466032 FBXW7Q969H0 707 aa7.26□□□□□ -1.25
CHMP3-206ENST00000466032 RILPL2Q969X0 211 aa7.26□□□□□ -1.25
CHMP3-206ENST00000466032 RTFDC1Q9BY42 306 aaPredicted RBP7.26□□□□□ -1.25
CHMP3-206ENST00000466032 ZC3H12CQ9C0D7 883 aaKnown RBP7.26□□□□□ -1.25
CHMP3-206ENST00000466032 PAG1Q9NWQ8 432 aa7.26□□□□□ -1.25
CHMP3-206ENST00000466032 NSFL1CQ9UNZ2 370 aaKnown RBP7.26□□□□□ -1.25
CHMP3-206ENST00000466032 SUGT1Q9Y2Z0 365 aa7.26□□□□□ -1.25
CHMP3-206ENST00000466032 KIF13BQ9NQT8 1826 aa7.25□□□□□ -1.25
CHMP3-206ENST00000466032 RNF225M0QZC1 329 aaPredicted RBP7.25□□□□□ -1.25
CHMP3-206ENST00000466032 FRAT2O75474 233 aaPredicted RBP7.25□□□□□ -1.25
CHMP3-206ENST00000466032 ZBTB7AO95365 584 aa7.25□□□□□ -1.25
CHMP3-206ENST00000466032 GSPT1P15170 499 aaKnown RBP7.25□□□□□ -1.25
CHMP3-206ENST00000466032 FOXK2Q01167 660 aa7.25□□□□□ -1.25
CHMP3-206ENST00000466032 MAP3K12Q12852 859 aa7.25□□□□□ -1.25
CHMP3-206ENST00000466032 CCDC93Q567U6 631 aa7.25□□□□□ -1.25
CHMP3-206ENST00000466032 PRPF40BQ6NWY9 871 aaKnown RBP7.25□□□□□ -1.25
CHMP3-206ENST00000466032 PODNQ7Z5L7 613 aa7.25□□□□□ -1.25
CHMP3-206ENST00000466032 SLF2Q8IX21 1173 aa7.25□□□□□ -1.25
CHMP3-206ENST00000466032 KBTBD3Q8NAB2 608 aa7.25□□□□□ -1.25
CHMP3-206ENST00000466032 WDR66Q8TBY9 1149 aa7.25□□□□□ -1.25
CHMP3-206ENST00000466032 PSMD1Q99460 953 aa7.25□□□□□ -1.25
CHMP3-206ENST00000466032 COA1Q9GZY4 146 aa7.25□□□□□ -1.25
CHMP3-206ENST00000466032 DIAPH3Q9NSV4 1193 aa7.25□□□□□ -1.25
CHMP3-206ENST00000466032 TNRC6CQ9HCJ0 1690 aaKnown RBP7.25□□□□□ -1.25
CHMP3-206ENST00000466032 SALL1Q9NSC2 1324 aa7.25□□□□□ -1.25
CHMP3-206ENST00000466032 DUOX1Q9NRD9 1551 aa7.25□□□□□ -1.25
CHMP3-206ENST00000466032 ARAP2Q8WZ64 1704 aa7.24□□□□□ -1.25
CHMP3-206ENST00000466032 ANKRD31Q8N7Z5 1873 aa7.24□□□□□ -1.25
CHMP3-206ENST00000466032 TAF5LO75529 589 aa7.24□□□□□ -1.25
CHMP3-206ENST00000466032 UFL1O94874 794 aa7.24□□□□□ -1.25
CHMP3-206ENST00000466032 MCCP23508 829 aa7.24□□□□□ -1.25
CHMP3-206ENST00000466032 COPS2P61201 443 aa7.24□□□□□ -1.25
CHMP3-206ENST00000466032 UBE3CQ15386 1083 aa7.24□□□□□ -1.25
CHMP3-206ENST00000466032 WASHC4Q2M389 1173 aa7.24□□□□□ -1.25
CHMP3-206ENST00000466032 C8orf34Q49A92 452 aa7.24□□□□□ -1.25
CHMP3-206ENST00000466032 DALRD3Q5D0E6 543 aaKnown RBP7.24□□□□□ -1.25
CHMP3-206ENST00000466032 KIAA1211Q6ZU35 1233 aa7.24□□□□□ -1.25
CHMP3-206ENST00000466032 CCDC24Q8N4L8 307 aa7.24□□□□□ -1.25
CHMP3-206ENST00000466032 SPATA5Q8NB90 893 aa7.24□□□□□ -1.25
CHMP3-206ENST00000466032 HELBQ8NG08 1087 aaPredicted RBP7.24□□□□□ -1.25
CHMP3-206ENST00000466032 TBC1D16Q8TBP0 767 aa7.24□□□□□ -1.25
CHMP3-206ENST00000466032 OTUD7AQ8TE49 926 aaPredicted RBP7.24□□□□□ -1.25
CHMP3-206ENST00000466032 FAM84BQ96KN1 310 aaPredicted RBP7.24□□□□□ -1.25
CHMP3-206ENST00000466032 FSD1Q9BTV5 496 aa7.24□□□□□ -1.25
CHMP3-206ENST00000466032 BOLA2Q9H3K6 86 aa7.24□□□□□ -1.25
CHMP3-206ENST00000466032 HELLSQ9NRZ9 838 aa7.24□□□□□ -1.25
CHMP3-206ENST00000466032 LRRC37AA6NMS7 1700 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms