RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 CRNKL1Q9BZJ0 848 aaKnown RBP13.04□□□□□ -0.32
NPHP3-203ENST00000465756 IL1RAPL2Q9NP60 686 aa13.04□□□□□ -0.32
NPHP3-203ENST00000465756 HMG20BQ9P0W2 317 aa13.04□□□□□ -0.32
NPHP3-203ENST00000465756 CTCFP49711 727 aaPredicted RBP13.04□□□□□ -0.32
NPHP3-203ENST00000465756 CERS5Q8N5B7 392 aa13.04□□□□□ -0.32
NPHP3-203ENST00000465756 MXD3Q9BW11 206 aa13.04□□□□□ -0.32
NPHP3-203ENST00000465756 DHX36Q9H2U1 1008 aaKnown RBP13.04□□□□□ -0.32
NPHP3-203ENST00000465756 DCTPP1Q9H773 170 aa13.04□□□□□ -0.32
NPHP3-203ENST00000465756 GLRX3O76003 335 aaKnown RBP13.03□□□□□ -0.32
NPHP3-203ENST00000465756 CYP7A1P22680 504 aa13.03□□□□□ -0.32
NPHP3-203ENST00000465756 USP5P45974 858 aa13.03□□□□□ -0.32
NPHP3-203ENST00000465756 DNAJC2Q99543 621 aaKnown RBP13.03□□□□□ -0.32
NPHP3-203ENST00000465756 MANSC4A6NHS7 340 aaPredicted RBP13.03□□□□□ -0.32
NPHP3-203ENST00000465756 CRACR2BQ8N4Y2 399 aaPredicted RBP13.03□□□□□ -0.32
NPHP3-203ENST00000465756 TBC1D2Q9BYX2 928 aa13.03□□□□□ -0.32
NPHP3-203ENST00000465756 PICK1Q9NRD5 415 aa13.03□□□□□ -0.32
NPHP3-203ENST00000465756 TTC41PQ6P2S7 1318 aa13.03□□□□□ -0.32
NPHP3-203ENST00000465756 TRAF5O00463 557 aa13.03□□□□□ -0.32
NPHP3-203ENST00000465756 NPM3O75607 178 aaKnown RBP13.03□□□□□ -0.32
NPHP3-203ENST00000465756 BTDP43251 543 aa13.03□□□□□ -0.32
NPHP3-203ENST00000465756 PRMT6Q96LA8 375 aaPredicted RBP13.03□□□□□ -0.32
NPHP3-203ENST00000465756 GINM1Q9NU53 330 aa13.03□□□□□ -0.32
NPHP3-203ENST00000465756 DAGLAQ9Y4D2 1042 aa13.03□□□□□ -0.32
NPHP3-203ENST00000465756 TTC6Q86TZ1 520 aa13.02□□□□□ -0.32
NPHP3-203ENST00000465756 TICAM2Q86XR7 235 aa13.02□□□□□ -0.33
NPHP3-203ENST00000465756 ZBED3Q96IU2 234 aaPredicted RBP13.02□□□□□ -0.33
NPHP3-203ENST00000465756 MAP3K9P80192 1104 aa13.02□□□□□ -0.33
NPHP3-203ENST00000465756 SLC51AQ86UW1 340 aa13.02□□□□□ -0.33
NPHP3-203ENST00000465756 ATP5JP18859 108 aa13.01□□□□□ -0.33
NPHP3-203ENST00000465756 HDAC1Q13547 482 aaPredicted RBP13.01□□□□□ -0.33
NPHP3-203ENST00000465756 MFAP1P55081 439 aaKnown RBP13.01□□□□□ -0.33
NPHP3-203ENST00000465756 ZNF287Q9HBT7 754 aa13.01□□□□□ -0.33
NPHP3-203ENST00000465756 SNRKQ9NRH2 765 aa13.01□□□□□ -0.33
NPHP3-203ENST00000465756 TRPM7Q96QT4 1865 aa13.01□□□□□ -0.33
NPHP3-203ENST00000465756 SUPT16HQ9Y5B9 1047 aaKnown RBP13.01□□□□□ -0.33
NPHP3-203ENST00000465756 PAPPA2Q9BXP8 1791 aa13□□□□□ -0.33
NPHP3-203ENST00000465756 SLC3A2P08195 630 aaKnown RBP13□□□□□ -0.33
NPHP3-203ENST00000465756 ANKRD45Q5TZF3 282 aa13□□□□□ -0.33
NPHP3-203ENST00000465756 SAPCD2Q86UD0 394 aa13□□□□□ -0.33
NPHP3-203ENST00000465756 EAF2Q96CJ1 260 aaPredicted RBP13□□□□□ -0.33
NPHP3-203ENST00000465756 AS3MTQ9HBK9 375 aa13□□□□□ -0.33
NPHP3-203ENST00000465756 GAKO14976 1311 aa13□□□□□ -0.33
NPHP3-203ENST00000465756 PRDX5P30044 214 aa13□□□□□ -0.33
NPHP3-203ENST00000465756 JMYQ8N9B5 988 aa13□□□□□ -0.33
NPHP3-203ENST00000465756 DBNLQ9UJU6 430 aaKnown RBP13□□□□□ -0.33
NPHP3-203ENST00000465756 MYH13Q9UKX3 1938 aa13□□□□□ -0.33
NPHP3-203ENST00000465756 SHTN1A0MZ66 631 aa13□□□□□ -0.33
NPHP3-203ENST00000465756 HIP1O00291 1037 aa13□□□□□ -0.33
NPHP3-203ENST00000465756 NACAP1Q9BZK3 213 aa13□□□□□ -0.33
NPHP3-203ENST00000465756 GPR75-ASB3A0A0A6YYF3 556 aa12.99□□□□□ -0.33
NPHP3-203ENST00000465756 ZBTB48P10074 688 aaPredicted RBP12.99□□□□□ -0.33
NPHP3-203ENST00000465756 MECOMQ03112 1051 aa12.99□□□□□ -0.33
NPHP3-203ENST00000465756 PABPC4Q13310 644 aaKnown RBP eCLIP12.99□□□□□ -0.33
NPHP3-203ENST00000465756 PAG1Q9NWQ8 432 aa12.99□□□□□ -0.33
NPHP3-203ENST00000465756 MAGEB6P1A0A0J9YX57 407 aa12.99□□□□□ -0.33
NPHP3-203ENST00000465756 IDI2Q9BXS1 227 aa12.99□□□□□ -0.33
NPHP3-203ENST00000465756 ZAP70P43403 619 aa12.99□□□□□ -0.33
NPHP3-203ENST00000465756 NBR1Q14596 966 aa12.99□□□□□ -0.33
NPHP3-203ENST00000465756 PPP4R3BQ5MIZ7 849 aa12.99□□□□□ -0.33
NPHP3-203ENST00000465756 CABP5Q9NP86 173 aa12.99□□□□□ -0.33
NPHP3-203ENST00000465756 HERC5Q9UII4 1024 aaKnown RBP12.99□□□□□ -0.33
NPHP3-203ENST00000465756 SCN9AQ15858 1988 aa12.98□□□□□ -0.33
NPHP3-203ENST00000465756 POLR3DP05423 398 aaPredicted RBP12.98□□□□□ -0.33
NPHP3-203ENST00000465756 MCAMP43121 646 aa12.98□□□□□ -0.33
NPHP3-203ENST00000465756 VEGFBP49765 207 aa12.98□□□□□ -0.33
NPHP3-203ENST00000465756 FOXP4Q8IVH2 680 aaPredicted RBP12.98□□□□□ -0.33
NPHP3-203ENST00000465756 WTIPA6NIX2 430 aaPredicted RBP12.98□□□□□ -0.33
NPHP3-203ENST00000465756 GNAT2P19087 354 aa12.98□□□□□ -0.33
NPHP3-203ENST00000465756 PPP4CP60510 307 aa12.98□□□□□ -0.33
NPHP3-203ENST00000465756 PRKG1Q13976 671 aa12.98□□□□□ -0.33
NPHP3-203ENST00000465756 CDC42EP5Q6NZY7 148 aa12.98□□□□□ -0.33
NPHP3-203ENST00000465756 GOLIM4O00461 696 aa12.98□□□□□ -0.33
NPHP3-203ENST00000465756 SLC10A3P09131 477 aa12.98□□□□□ -0.33
NPHP3-203ENST00000465756 RGS3P49796 1198 aa12.98□□□□□ -0.33
NPHP3-203ENST00000465756 PICALMQ13492 652 aa12.98□□□□□ -0.33
NPHP3-203ENST00000465756 DIXDC1Q155Q3 683 aa12.98□□□□□ -0.33
NPHP3-203ENST00000465756 UBE2Q2LH0YL09 131 aa12.97□□□□□ -0.33
NPHP3-203ENST00000465756 GTF2A2P52657 109 aa12.97□□□□□ -0.33
NPHP3-203ENST00000465756 MAP3K11Q16584 847 aa12.97□□□□□ -0.33
NPHP3-203ENST00000465756 C20orf194Q5TEA3 1177 aa12.97□□□□□ -0.33
NPHP3-203ENST00000465756 MAGEB6Q8N7X4 407 aa12.97□□□□□ -0.33
NPHP3-203ENST00000465756 CSRNP1Q96S65 589 aa12.97□□□□□ -0.33
NPHP3-203ENST00000465756 ADAMTSL1Q8N6G6 1762 aa12.97□□□□□ -0.33
NPHP3-203ENST00000465756 A0A1B0GUL6 1792 aa12.97□□□□□ -0.33
NPHP3-203ENST00000465756 CYP4F22Q6NT55 531 aa12.97□□□□□ -0.33
NPHP3-203ENST00000465756 ERO1BQ86YB8 467 aa12.97□□□□□ -0.33
NPHP3-203ENST00000465756 NSUN4Q96CB9 384 aaKnown RBP12.97□□□□□ -0.33
NPHP3-203ENST00000465756 SAGE1Q9NXZ1 904 aa12.97□□□□□ -0.33
NPHP3-203ENST00000465756 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.97□□□□□ -0.33
NPHP3-203ENST00000465756 SLC9C2Q5TAH2 1124 aa12.97□□□□□ -0.33
NPHP3-203ENST00000465756 FSD1Q9BTV5 496 aa12.97□□□□□ -0.33
NPHP3-203ENST00000465756 BOLA2Q9H3K6 86 aa12.97□□□□□ -0.33
NPHP3-203ENST00000465756 PI4KBQ9UBF8 816 aa12.97□□□□□ -0.33
NPHP3-203ENST00000465756 AOX1Q06278 1338 aa12.97□□□□□ -0.33
NPHP3-203ENST00000465756 HSPA1AP0DMV8 641 aaKnown RBP12.96□□□□□ -0.33
NPHP3-203ENST00000465756 HSPA1BP0DMV9 641 aaKnown RBP12.96□□□□□ -0.33
NPHP3-203ENST00000465756 KIF22Q14807 665 aa12.96□□□□□ -0.33
NPHP3-203ENST00000465756 APOBEC3HQ6NTF7 200 aaKnown RBP12.96□□□□□ -0.33
NPHP3-203ENST00000465756 HAUS7Q99871 368 aa12.96□□□□□ -0.33
NPHP3-203ENST00000465756 ARAP2Q8WZ64 1704 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms