RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 DAGLAQ9Y4D2 1042 aa28.36■■■□□ 2.13
USP42-205ENST00000465073 SEMA3EO15041 775 aa28.35■■■□□ 2.13
USP42-205ENST00000465073 SNAPC2Q13487 334 aa28.35■■■□□ 2.13
USP42-205ENST00000465073 ZNF341Q9BYN7 854 aa28.35■■■□□ 2.13
USP42-205ENST00000465073 ZCCHC17Q9NP64 241 aaKnown RBP28.35■■■□□ 2.13
USP42-205ENST00000465073 LRRFIP2Q9Y608 721 aaKnown RBP28.35■■■□□ 2.13
USP42-205ENST00000465073 HTTP42858 3142 aa28.35■■■□□ 2.13
USP42-205ENST00000465073 LDHBP07195 334 aaKnown RBP28.34■■■□□ 2.13
USP42-205ENST00000465073 PPIL2Q13356 520 aa28.34■■■□□ 2.13
USP42-205ENST00000465073 CDC42EP5Q6NZY7 148 aa28.34■■■□□ 2.13
USP42-205ENST00000465073 ARMC5Q96C12 935 aa28.34■■■□□ 2.13
USP42-205ENST00000465073 DENND2AQ9ULE3 1009 aa28.34■■■□□ 2.13
USP42-205ENST00000465073 SALL1Q9NSC2 1324 aa28.34■■■□□ 2.13
USP42-205ENST00000465073 PRDX5P30044 214 aa28.34■■■□□ 2.13
USP42-205ENST00000465073 DIXDC1Q155Q3 683 aa28.34■■■□□ 2.13
USP42-205ENST00000465073 MIGA2Q7L4E1 593 aa28.34■■■□□ 2.13
USP42-205ENST00000465073 IRF6O14896 467 aa28.33■■■□□ 2.13
USP42-205ENST00000465073 ZBTB22O15209 634 aa28.33■■■□□ 2.13
USP42-205ENST00000465073 CAP1Q01518 475 aa28.33■■■□□ 2.13
USP42-205ENST00000465073 COPRSQ9NQ92 184 aa28.33■■■□□ 2.13
USP42-205ENST00000465073 PPATQ06203 517 aa28.32■■■□□ 2.12
USP42-205ENST00000465073 PA2G4Q9UQ80 394 aaKnown RBP28.32■■■□□ 2.12
USP42-205ENST00000465073 BTBD19C9JJ37 291 aa28.31■■■□□ 2.12
USP42-205ENST00000465073 PHKA1P46020 1223 aa28.31■■■□□ 2.12
USP42-205ENST00000465073 RARSP54136 660 aaKnown RBP28.31■■■□□ 2.12
USP42-205ENST00000465073 TCP10Q12799 353 aa28.31■■■□□ 2.12
USP42-205ENST00000465073 ARHGAP45Q92619 1136 aa28.31■■■□□ 2.12
USP42-205ENST00000465073 ZNF112Q9UJU3 913 aa28.31■■■□□ 2.12
USP42-205ENST00000465073 POTEFA5A3E0 1075 aa28.3■■■□□ 2.12
USP42-205ENST00000465073 TLR2O60603 784 aa28.3■■■□□ 2.12
USP42-205ENST00000465073 MEIS3Q99687 375 aa28.3■■■□□ 2.12
USP42-205ENST00000465073 USP40Q9NVE5 1235 aa28.3■■■□□ 2.12
USP42-205ENST00000465073 INPP5BP32019 993 aa28.29■■■□□ 2.12
USP42-205ENST00000465073 ZGPATQ8N5A5 531 aaKnown RBP28.29■■■□□ 2.12
USP42-205ENST00000465073 CCER2I3L3R5 266 aa28.28■■■□□ 2.12
USP42-205ENST00000465073 NFIAQ12857 509 aa28.28■■■□□ 2.12
USP42-205ENST00000465073 MYH13Q9UKX3 1938 aa28.28■■■□□ 2.12
USP42-205ENST00000465073 GNAI3P08754 354 aa28.27■■■□□ 2.12
USP42-205ENST00000465073 CCDC102BQ68D86 513 aa28.27■■■□□ 2.12
USP42-205ENST00000465073 FAM198AQ9UFP1 575 aa28.27■■■□□ 2.12
USP42-205ENST00000465073 KIF22Q14807 665 aa28.27■■■□□ 2.12
USP42-205ENST00000465073 NBPF11Q86T75 865 aa28.27■■■□□ 2.12
USP42-205ENST00000465073 ADORA1P30542 326 aa28.26■■■□□ 2.11
USP42-205ENST00000465073 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.26■■■□□ 2.11
USP42-205ENST00000465073 NOL9Q5SY16 702 aaKnown RBP28.25■■■□□ 2.11
USP42-205ENST00000465073 KCNH4Q9UQ05 1017 aa28.25■■■□□ 2.11
USP42-205ENST00000465073 PTCH2Q9Y6C5 1203 aa28.25■■■□□ 2.11
USP42-205ENST00000465073 TIMM10P62072 90 aa28.24■■■□□ 2.11
USP42-205ENST00000465073 LACTBP83111 547 aaPredicted RBP28.24■■■□□ 2.11
USP42-205ENST00000465073 SLC9C1Q4G0N8 1177 aa28.24■■■□□ 2.11
USP42-205ENST00000465073 ANKRD23Q86SG2 305 aa28.24■■■□□ 2.11
USP42-205ENST00000465073 ZNF333Q96JL9 665 aa28.24■■■□□ 2.11
USP42-205ENST00000465073 TMEM106CQ9BVX2 250 aa28.24■■■□□ 2.11
USP42-205ENST00000465073 AKAP2Q9Y2D5 859 aa28.24■■■□□ 2.11
USP42-205ENST00000465073 PDS5AQ29RF7 1337 aaKnown RBP28.24■■■□□ 2.11
USP42-205ENST00000465073 KIAA0100Q14667 2235 aaKnown RBP28.23■■■□□ 2.11
USP42-205ENST00000465073 SRGAP3O43295 1099 aa28.23■■■□□ 2.11
USP42-205ENST00000465073 GNRH1P01148 92 aa28.23■■■□□ 2.11
USP42-205ENST00000465073 MTX1Q13505 466 aa28.23■■■□□ 2.11
USP42-205ENST00000465073 RASGRF1Q13972 1273 aa28.23■■■□□ 2.11
USP42-205ENST00000465073 SLF2Q8IX21 1173 aa28.23■■■□□ 2.11
USP42-205ENST00000465073 IDI2Q9BXS1 227 aa28.23■■■□□ 2.11
USP42-205ENST00000465073 ENTPD3O75355 529 aa28.22■■■□□ 2.11
USP42-205ENST00000465073 ZFPM1Q8IX07 1006 aa28.22■■■□□ 2.11
USP42-205ENST00000465073 GAKO14976 1311 aa28.22■■■□□ 2.11
USP42-205ENST00000465073 IPO8O15397 1037 aaKnown RBP28.21■■■□□ 2.11
USP42-205ENST00000465073 EN2P19622 333 aaPredicted RBP28.21■■■□□ 2.11
USP42-205ENST00000465073 SPTY2D1Q68D10 685 aaPredicted RBP28.21■■■□□ 2.11
USP42-205ENST00000465073 DZIP1Q86YF9 867 aaKnown RBP28.21■■■□□ 2.11
USP42-205ENST00000465073 FAM163AQ96GL9 167 aaPredicted RBP28.21■■■□□ 2.11
USP42-205ENST00000465073 CENPFP49454 3210 aa28.21■■■□□ 2.11
USP42-205ENST00000465073 A0A1B0GUL7 405 aa28.21■■■□□ 2.11
USP42-205ENST00000465073 RGS3P49796 1198 aa28.21■■■□□ 2.11
USP42-205ENST00000465073 MVPQ14764 893 aaKnown RBP28.21■■■□□ 2.11
USP42-205ENST00000465073 C17orf99Q6UX52 265 aa28.21■■■□□ 2.11
USP42-205ENST00000465073 ARHGAP39Q9C0H5 1083 aa28.21■■■□□ 2.11
USP42-205ENST00000465073 ABCF2Q9UG63 623 aa28.21■■■□□ 2.11
USP42-205ENST00000465073 PDHXO00330 501 aa28.2■■■□□ 2.1
USP42-205ENST00000465073 PRMT2P55345 433 aa28.2■■■□□ 2.1
USP42-205ENST00000465073 TFCP2Q12800 502 aa28.2■■■□□ 2.1
USP42-205ENST00000465073 XAGE2Q96GT9 111 aa28.2■■■□□ 2.1
USP42-205ENST00000465073 CXCL11O14625 94 aa28.19■■■□□ 2.1
USP42-205ENST00000465073 RBBP6Q7Z6E9 1792 aaKnown RBP28.18■■■□□ 2.1
USP42-205ENST00000465073 PHF20L1A8MW92 1017 aa28.18■■■□□ 2.1
USP42-205ENST00000465073 AK9Q5TCS8 1911 aa28.17■■■□□ 2.1
USP42-205ENST00000465073 ATRNL1Q5VV63 1379 aa28.17■■■□□ 2.1
USP42-205ENST00000465073 MOGSQ13724 837 aa28.17■■■□□ 2.1
USP42-205ENST00000465073 ZSCAN29Q8IWY8 852 aaPredicted RBP28.17■■■□□ 2.1
USP42-205ENST00000465073 CPA4Q9UI42 421 aa28.17■■■□□ 2.1
USP42-205ENST00000465073 MAP3K10Q02779 954 aa28.16■■■□□ 2.1
USP42-205ENST00000465073 SLC4A8Q2Y0W8 1093 aa28.16■■■□□ 2.1
USP42-205ENST00000465073 GCC1Q96CN9 775 aa28.16■■■□□ 2.1
USP42-205ENST00000465073 PCDH10Q9P2E7 1040 aa28.16■■■□□ 2.1
USP42-205ENST00000465073 GNAI2P04899 355 aa28.15■■■□□ 2.1
USP42-205ENST00000465073 TRIM27P14373 513 aa28.15■■■□□ 2.1
USP42-205ENST00000465073 ERICH6Q7L0X2 663 aa28.15■■■□□ 2.1
USP42-205ENST00000465073 SCYL3Q8IZE3 742 aa28.15■■■□□ 2.1
USP42-205ENST00000465073 NEUROD6Q96NK8 337 aa28.15■■■□□ 2.1
USP42-205ENST00000465073 PICK1Q9NRD5 415 aa28.15■■■□□ 2.1
USP42-205ENST00000465073 RFX7Q2KHR2 1363 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms