RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 CCDC85CA6NKD9 419 aa31.93■■■□□ 2.7
U2AF1-206ENST00000464750 MAP3K9P80192 1104 aa31.93■■■□□ 2.7
U2AF1-206ENST00000464750 ATP8B2P98198 1209 aa31.93■■■□□ 2.7
U2AF1-206ENST00000464750 VGLL4Q14135 290 aa31.93■■■□□ 2.7
U2AF1-206ENST00000464750 IFNL1Q8IU54 200 aa31.93■■■□□ 2.7
U2AF1-206ENST00000464750 SSH3Q8TE77 659 aa31.93■■■□□ 2.7
U2AF1-206ENST00000464750 OPTNQ96CV9 577 aa31.93■■■□□ 2.7
U2AF1-206ENST00000464750 ABCF2Q9UG63 623 aa31.93■■■□□ 2.7
U2AF1-206ENST00000464750 ZBTB7BO15156 539 aaPredicted RBP31.92■■■□□ 2.7
U2AF1-206ENST00000464750 ALDH1A1P00352 501 aa31.92■■■□□ 2.7
U2AF1-206ENST00000464750 GORABQ5T7V8 394 aa31.92■■■□□ 2.7
U2AF1-206ENST00000464750 DZIP1Q86YF9 867 aaKnown RBP31.92■■■□□ 2.7
U2AF1-206ENST00000464750 ZNF296Q8WUU4 475 aaPredicted RBP31.92■■■□□ 2.7
U2AF1-206ENST00000464750 HOOK2Q96ED9 719 aa31.92■■■□□ 2.7
U2AF1-206ENST00000464750 CFHR5Q9BXR6 569 aa31.92■■■□□ 2.7
U2AF1-206ENST00000464750 CSADQ9Y600 493 aa31.92■■■□□ 2.7
U2AF1-206ENST00000464750 CTU1Q7Z7A3 348 aaKnown RBP31.91■■■□□ 2.7
U2AF1-206ENST00000464750 FAM151AQ8WW52 585 aa31.91■■■□□ 2.7
U2AF1-206ENST00000464750 GPR25O00155 361 aa31.9■■■□□ 2.7
U2AF1-206ENST00000464750 IGF2BP3O00425 579 aaKnown RBP eCLIP31.9■■■□□ 2.7
U2AF1-206ENST00000464750 NFIAQ12857 509 aa31.9■■■□□ 2.7
U2AF1-206ENST00000464750 OS9Q13438 667 aaPredicted RBP31.9■■■□□ 2.7
U2AF1-206ENST00000464750 NOM1Q5C9Z4 860 aaKnown RBP31.9■■■□□ 2.7
U2AF1-206ENST00000464750 USP40Q9NVE5 1235 aa31.9■■■□□ 2.7
U2AF1-206ENST00000464750 DOCK2Q92608 1830 aa31.9■■■□□ 2.7
U2AF1-206ENST00000464750 GAKO14976 1311 aa31.9■■■□□ 2.7
U2AF1-206ENST00000464750 TCP10Q12799 353 aa31.89■■■□□ 2.7
U2AF1-206ENST00000464750 DCAF15Q66K64 600 aa31.89■■■□□ 2.7
U2AF1-206ENST00000464750 SPTY2D1Q68D10 685 aaPredicted RBP31.89■■■□□ 2.7
U2AF1-206ENST00000464750 PANK1Q8TE04 598 aa31.89■■■□□ 2.7
U2AF1-206ENST00000464750 CNKSR2Q8WXI2 1034 aa31.89■■■□□ 2.7
U2AF1-206ENST00000464750 WRNIP1Q96S55 665 aa31.89■■■□□ 2.7
U2AF1-206ENST00000464750 R3HDMLQ9H3Y0 253 aa31.89■■■□□ 2.7
U2AF1-206ENST00000464750 HMG20BQ9P0W2 317 aa31.89■■■□□ 2.7
U2AF1-206ENST00000464750 SURF6O75683 361 aaKnown RBP31.87■■■□□ 2.69
U2AF1-206ENST00000464750 ARID4AP29374 1257 aaPredicted RBP31.87■■■□□ 2.69
U2AF1-206ENST00000464750 PI16Q6UXB8 463 aa31.87■■■□□ 2.69
U2AF1-206ENST00000464750 FAM198AQ9UFP1 575 aa31.87■■■□□ 2.69
U2AF1-206ENST00000464750 ERICH6Q7L0X2 663 aa31.86■■■□□ 2.69
U2AF1-206ENST00000464750 SLF2Q8IX21 1173 aa31.86■■■□□ 2.69
U2AF1-206ENST00000464750 SPATA5Q8NB90 893 aa31.86■■■□□ 2.69
U2AF1-206ENST00000464750 OTUD5Q96G74 571 aa31.86■■■□□ 2.69
U2AF1-206ENST00000464750 ZNF341Q9BYN7 854 aa31.86■■■□□ 2.69
U2AF1-206ENST00000464750 GPR108Q9NPR9 543 aa31.86■■■□□ 2.69
U2AF1-206ENST00000464750 SNCAIPQ9Y6H5 919 aa31.86■■■□□ 2.69
U2AF1-206ENST00000464750 RFX7Q2KHR2 1363 aa31.85■■■□□ 2.69
U2AF1-206ENST00000464750 TESPA1A2RU30 521 aaPredicted RBP31.85■■■□□ 2.69
U2AF1-206ENST00000464750 TNNI3KQ59H18 835 aa31.85■■■□□ 2.69
U2AF1-206ENST00000464750 FPGT-TNNI3KV9GXZ4 949 aa31.85■■■□□ 2.69
U2AF1-206ENST00000464750 MROH7-TTC4A0A0A0MT08 1334 aa31.84■■■□□ 2.69
U2AF1-206ENST00000464750 SPDYE5A6NIY4 337 aa31.84■■■□□ 2.69
U2AF1-206ENST00000464750 OTUD7BQ6GQQ9 843 aa31.84■■■□□ 2.69
U2AF1-206ENST00000464750 MIGA2Q7L4E1 593 aa31.84■■■□□ 2.69
U2AF1-206ENST00000464750 ZKSCAN4Q969J2 545 aaPredicted RBP31.84■■■□□ 2.69
U2AF1-206ENST00000464750 MAST2Q6P0Q8 1798 aa31.84■■■□□ 2.69
U2AF1-206ENST00000464750 FKTNO75072 461 aa31.83■■■□□ 2.69
U2AF1-206ENST00000464750 UQCRFS1P1P0C7P4 283 aa31.83■■■□□ 2.69
U2AF1-206ENST00000464750 MCAMP43121 646 aa31.83■■■□□ 2.69
U2AF1-206ENST00000464750 MECOMQ03112 1051 aa31.83■■■□□ 2.69
U2AF1-206ENST00000464750 CEP85Q6P2H3 762 aa31.83■■■□□ 2.69
U2AF1-206ENST00000464750 FAM163AQ96GL9 167 aaPredicted RBP31.83■■■□□ 2.69
U2AF1-206ENST00000464750 MS4A4AQ96JQ5 239 aa31.83■■■□□ 2.69
U2AF1-206ENST00000464750 NOP58Q9Y2X3 529 aaKnown RBP31.83■■■□□ 2.69
U2AF1-206ENST00000464750 BTDP43251 543 aa31.82■■■□□ 2.68
U2AF1-206ENST00000464750 RGS3P49796 1198 aa31.82■■■□□ 2.68
U2AF1-206ENST00000464750 PTPN18Q99952 460 aa31.82■■■□□ 2.68
U2AF1-206ENST00000464750 DBNDD2Q9BQY9 259 aa31.82■■■□□ 2.68
U2AF1-206ENST00000464750 IDI2Q9BXS1 227 aa31.82■■■□□ 2.68
U2AF1-206ENST00000464750 MS4A1P11836 297 aa31.81■■■□□ 2.68
U2AF1-206ENST00000464750 GTF2A2P52657 109 aa31.81■■■□□ 2.68
U2AF1-206ENST00000464750 TBC1D9Q6ZT07 1266 aa31.81■■■□□ 2.68
U2AF1-206ENST00000464750 ERO1BQ86YB8 467 aa31.81■■■□□ 2.68
U2AF1-206ENST00000464750 ZFPM1Q8IX07 1006 aa31.81■■■□□ 2.68
U2AF1-206ENST00000464750 BRI3BPQ8WY22 251 aa31.81■■■□□ 2.68
U2AF1-206ENST00000464750 CCL15-CCL14A0A0B4J2E2 113 aa31.8■■■□□ 2.68
U2AF1-206ENST00000464750 CCL15Q16663 113 aa31.8■■■□□ 2.68
U2AF1-206ENST00000464750 TTC39AQ5SRH9 613 aa31.8■■■□□ 2.68
U2AF1-206ENST00000464750 ZNF384Q8TF68 577 aa31.8■■■□□ 2.68
U2AF1-206ENST00000464750 ENTPD3O75355 529 aa31.79■■■□□ 2.68
U2AF1-206ENST00000464750 INPP5BP32019 993 aa31.79■■■□□ 2.68
U2AF1-206ENST00000464750 CRHR2Q13324 411 aa31.79■■■□□ 2.68
U2AF1-206ENST00000464750 CCDC158Q5M9N0 1113 aa31.78■■■□□ 2.68
U2AF1-206ENST00000464750 NSUN4Q96CB9 384 aaKnown RBP31.78■■■□□ 2.68
U2AF1-206ENST00000464750 RAI14Q9P0K7 980 aa31.78■■■□□ 2.68
U2AF1-206ENST00000464750 GPR75-ASB3A0A0A6YYF3 556 aa31.77■■■□□ 2.68
U2AF1-206ENST00000464750 WDHD1O75717 1129 aaPredicted RBP31.77■■■□□ 2.68
U2AF1-206ENST00000464750 GSTO1P78417 241 aa31.77■■■□□ 2.68
U2AF1-206ENST00000464750 PKN2Q16513 984 aaKnown RBP31.77■■■□□ 2.68
U2AF1-206ENST00000464750 ZNF112Q9UJU3 913 aa31.77■■■□□ 2.68
U2AF1-206ENST00000464750 MYO5AQ9Y4I1 1855 aaKnown RBP31.77■■■□□ 2.68
U2AF1-206ENST00000464750 ATRNL1Q5VV63 1379 aa31.77■■■□□ 2.68
U2AF1-206ENST00000464750 PPIL2Q13356 520 aa31.76■■■□□ 2.67
U2AF1-206ENST00000464750 DDX4Q9NQI0 724 aaKnown RBP31.76■■■□□ 2.67
U2AF1-206ENST00000464750 SNRKQ9NRH2 765 aa31.76■■■□□ 2.67
U2AF1-206ENST00000464750 LDHCP07864 332 aa31.75■■■□□ 2.67
U2AF1-206ENST00000464750 RHBDL3P58872 404 aa31.75■■■□□ 2.67
U2AF1-206ENST00000464750 PICALMQ13492 652 aa31.75■■■□□ 2.67
U2AF1-206ENST00000464750 ZSCAN29Q8IWY8 852 aaPredicted RBP31.75■■■□□ 2.67
U2AF1-206ENST00000464750 LRP2BPQ9P2M1 347 aa31.75■■■□□ 2.67
U2AF1-206ENST00000464750 DBNLQ9UJU6 430 aaKnown RBP31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms