RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 PPP2R2CQ9Y2T4 447 aa13.26□□□□□ -0.29
TNRC6A-205ENST00000464539 MED23Q9ULK4 1368 aa13.25□□□□□ -0.29
TNRC6A-205ENST00000464539 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.25□□□□□ -0.29
TNRC6A-205ENST00000464539 H3BQF6 201 aa13.25□□□□□ -0.29
TNRC6A-205ENST00000464539 JAK2O60674 1132 aa13.25□□□□□ -0.29
TNRC6A-205ENST00000464539 PFKFB2O60825 505 aa13.25□□□□□ -0.29
TNRC6A-205ENST00000464539 ME1P48163 572 aa13.25□□□□□ -0.29
TNRC6A-205ENST00000464539 RPAINQ86UA6 219 aa13.25□□□□□ -0.29
TNRC6A-205ENST00000464539 CEP112Q8N8E3 955 aa13.25□□□□□ -0.29
TNRC6A-205ENST00000464539 DDX54Q8TDD1 881 aaKnown RBP13.25□□□□□ -0.29
TNRC6A-205ENST00000464539 SYTL4Q96C24 671 aaPredicted RBP13.25□□□□□ -0.29
TNRC6A-205ENST00000464539 USP28Q96RU2 1077 aa13.25□□□□□ -0.29
TNRC6A-205ENST00000464539 CEP89Q96ST8 783 aa13.25□□□□□ -0.29
TNRC6A-205ENST00000464539 UTP14AQ9BVJ6 771 aaKnown RBP13.25□□□□□ -0.29
TNRC6A-205ENST00000464539 KIF3CO14782 793 aa13.25□□□□□ -0.29
TNRC6A-205ENST00000464539 STX10O60499 249 aa13.25□□□□□ -0.29
TNRC6A-205ENST00000464539 HMGB1P09429 215 aaKnown RBP13.25□□□□□ -0.29
TNRC6A-205ENST00000464539 PACS2Q86VP3 889 aa13.25□□□□□ -0.29
TNRC6A-205ENST00000464539 FAM71BQ8TC56 605 aa13.25□□□□□ -0.29
TNRC6A-205ENST00000464539 SLC3A2P08195 630 aaKnown RBP13.24□□□□□ -0.29
TNRC6A-205ENST00000464539 PSEN1P49768 467 aa13.24□□□□□ -0.29
TNRC6A-205ENST00000464539 UBASH3AP57075 661 aa13.24□□□□□ -0.29
TNRC6A-205ENST00000464539 GNG11P61952 73 aa13.24□□□□□ -0.29
TNRC6A-205ENST00000464539 DPCR1Q3MIW9 517 aa13.24□□□□□ -0.29
TNRC6A-205ENST00000464539 BEND6Q5SZJ8 279 aaPredicted RBP13.24□□□□□ -0.29
TNRC6A-205ENST00000464539 VSTM4Q8IW00 320 aa13.24□□□□□ -0.29
TNRC6A-205ENST00000464539 MSANTD4Q8NCY6 345 aa13.24□□□□□ -0.29
TNRC6A-205ENST00000464539 FAM227BQ96M60 508 aa13.24□□□□□ -0.29
TNRC6A-205ENST00000464539 VPS18Q9P253 973 aa13.24□□□□□ -0.29
TNRC6A-205ENST00000464539 KDRP35968 1356 aa13.24□□□□□ -0.29
TNRC6A-205ENST00000464539 A0A087WUV0 522 aaPredicted RBP13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 FANCGO15287 622 aa13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 TOP1P11387 765 aaKnown RBP13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 CEBPZQ03701 1054 aaKnown RBP13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 MMS22LQ6ZRQ5 1243 aa13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 SRGAP1Q7Z6B7 1085 aa13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 DNAJC5GQ8N7S2 189 aa13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 KCNG4Q8TDN1 519 aa13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 MED4Q9NPJ6 270 aa13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 PCDHA7Q9UN72 937 aa13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 U3KPZ7 1027 aaPredicted RBP13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 LOC102724159A0A0B4J2E5 919 aa13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 YEATS4O95619 227 aa13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 HSP90B1P14625 803 aaKnown RBP13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 GSCP56915 257 aaPredicted RBP13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 PWP2Q15269 919 aaKnown RBP13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 HSP90B2PQ58FF3 399 aa13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 BEND3Q5T5X7 828 aa13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 SECISBP2LQ93073 1101 aaKnown RBP13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 KIFC2Q96AC6 838 aa13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 L1RE1Q9UN81 338 aa13.23□□□□□ -0.29
TNRC6A-205ENST00000464539 PPFIA4O75335 1185 aa13.22□□□□□ -0.29
TNRC6A-205ENST00000464539 EIF5P55010 431 aaKnown RBP13.22□□□□□ -0.29
TNRC6A-205ENST00000464539 SCRN1Q12765 414 aa13.22□□□□□ -0.29
TNRC6A-205ENST00000464539 TAF7Q15545 349 aaPredicted RBP13.22□□□□□ -0.29
TNRC6A-205ENST00000464539 MCTP2Q6DN12 878 aa13.22□□□□□ -0.29
TNRC6A-205ENST00000464539 Q6ZUG5 572 aa13.22□□□□□ -0.29
TNRC6A-205ENST00000464539 COL23A1Q86Y22 540 aaPredicted RBP13.22□□□□□ -0.29
TNRC6A-205ENST00000464539 NSUN7Q8NE18 718 aaKnown RBP13.22□□□□□ -0.29
TNRC6A-205ENST00000464539 ERCC4Q92889 916 aaPredicted RBP13.22□□□□□ -0.29
TNRC6A-205ENST00000464539 PDE11AQ9HCR9 933 aa13.22□□□□□ -0.29
TNRC6A-205ENST00000464539 USP31Q70CQ4 1352 aa13.22□□□□□ -0.29
TNRC6A-205ENST00000464539 GNAT3A8MTJ3 354 aa13.21□□□□□ -0.29
TNRC6A-205ENST00000464539 TAF5LO75529 589 aa13.21□□□□□ -0.29
TNRC6A-205ENST00000464539 SERPINC1P01008 464 aa13.21□□□□□ -0.29
TNRC6A-205ENST00000464539 HOXB7P09629 217 aa13.21□□□□□ -0.29
TNRC6A-205ENST00000464539 NBPF7P0C2Y1 421 aaPredicted RBP13.21□□□□□ -0.29
TNRC6A-205ENST00000464539 KCNQ4P56696 695 aa13.21□□□□□ -0.29
TNRC6A-205ENST00000464539 CHMP4BP1P59074 171 aa13.21□□□□□ -0.29
TNRC6A-205ENST00000464539 TMEM139Q8IV31 216 aa13.21□□□□□ -0.29
TNRC6A-205ENST00000464539 DNAAF4Q8WXU2 420 aa13.21□□□□□ -0.29
TNRC6A-205ENST00000464539 TCEANC2Q96MN5 208 aa13.21□□□□□ -0.29
TNRC6A-205ENST00000464539 BAG1Q99933 345 aaPredicted RBP13.21□□□□□ -0.29
TNRC6A-205ENST00000464539 RFX7Q2KHR2 1363 aa13.21□□□□□ -0.29
TNRC6A-205ENST00000464539 MYL5Q02045 173 aa13.21□□□□□ -0.3
TNRC6A-205ENST00000464539 TBX2Q13207 712 aaPredicted RBP13.21□□□□□ -0.3
TNRC6A-205ENST00000464539 HSP90AB2PQ58FF8 381 aa13.21□□□□□ -0.3
TNRC6A-205ENST00000464539 DNAJC21Q5F1R6 531 aaKnown RBP13.21□□□□□ -0.3
TNRC6A-205ENST00000464539 HDGFL1Q5TGJ6 251 aa13.21□□□□□ -0.3
TNRC6A-205ENST00000464539 MSL1Q68DK7 614 aa13.21□□□□□ -0.3
TNRC6A-205ENST00000464539 AACSQ86V21 672 aa13.21□□□□□ -0.3
TNRC6A-205ENST00000464539 EPC1Q9H2F5 836 aa13.21□□□□□ -0.3
TNRC6A-205ENST00000464539 CCNL1Q9UK58 526 aaPredicted RBP13.21□□□□□ -0.3
TNRC6A-205ENST00000464539 MAP3K19Q56UN5 1328 aa13.2□□□□□ -0.3
TNRC6A-205ENST00000464539 A0A0D9SFI3 127 aa13.2□□□□□ -0.3
TNRC6A-205ENST00000464539 CUTAO60888 179 aa13.2□□□□□ -0.3
TNRC6A-205ENST00000464539 TOMM70O94826 608 aa13.2□□□□□ -0.3
TNRC6A-205ENST00000464539 USP8P40818 1118 aa13.2□□□□□ -0.3
TNRC6A-205ENST00000464539 NDUFA8P51970 172 aa13.2□□□□□ -0.3
TNRC6A-205ENST00000464539 SF3A1Q15459 793 aaKnown RBP13.2□□□□□ -0.3
TNRC6A-205ENST00000464539 LRRC31Q6UY01 552 aa13.2□□□□□ -0.3
TNRC6A-205ENST00000464539 LINC00301Q8NCQ3 95 aa13.2□□□□□ -0.3
TNRC6A-205ENST00000464539 ZNF622Q969S3 477 aaKnown RBP eCLIP13.2□□□□□ -0.3
TNRC6A-205ENST00000464539 DRC1Q96MC2 740 aa13.2□□□□□ -0.3
TNRC6A-205ENST00000464539 WDR24Q96S15 920 aa13.2□□□□□ -0.3
TNRC6A-205ENST00000464539 FSD1Q9BTV5 496 aa13.2□□□□□ -0.3
TNRC6A-205ENST00000464539 VIPAS39Q9H9C1 493 aa13.2□□□□□ -0.3
TNRC6A-205ENST00000464539 POLR3EQ9NVU0 708 aa13.2□□□□□ -0.3
TNRC6A-205ENST00000464539 TUBE1Q9UJT0 475 aa13.2□□□□□ -0.3
TNRC6A-205ENST00000464539 LY75O60449 1722 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms