RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 ZNF157P51786 506 aaPredicted RBP20.81■□□□□ 0.92
VPS52-215ENST00000464425 SUPT20HL1Q3ZLR7 823 aa20.81■□□□□ 0.92
VPS52-215ENST00000464425 RGMBQ6NW40 437 aa20.81■□□□□ 0.92
VPS52-215ENST00000464425 CDAN1Q8IWY9 1227 aa20.81■□□□□ 0.92
VPS52-215ENST00000464425 ZNF384Q8TF68 577 aa20.81■□□□□ 0.92
VPS52-215ENST00000464425 NSUN4Q96CB9 384 aaKnown RBP20.81■□□□□ 0.92
VPS52-215ENST00000464425 AOC2O75106 756 aa20.8■□□□□ 0.92
VPS52-215ENST00000464425 NEFLP07196 543 aa20.8■□□□□ 0.92
VPS52-215ENST00000464425 PIH1D3Q9NQM4 214 aaKnown RBP20.8■□□□□ 0.92
VPS52-215ENST00000464425 GAKO14976 1311 aa20.79■□□□□ 0.92
VPS52-215ENST00000464425 BTDP43251 543 aa20.79■□□□□ 0.92
VPS52-215ENST00000464425 GSTO1P78417 241 aa20.79■□□□□ 0.92
VPS52-215ENST00000464425 HDAC1Q13547 482 aaPredicted RBP20.79■□□□□ 0.92
VPS52-215ENST00000464425 ARMC9Q7Z3E5 817 aa20.79■□□□□ 0.92
VPS52-215ENST00000464425 FAM163AQ96GL9 167 aaPredicted RBP20.79■□□□□ 0.92
VPS52-215ENST00000464425 TEPSINQ96N21 525 aa20.79■□□□□ 0.92
VPS52-215ENST00000464425 ANGEL1Q9UNK9 670 aaKnown RBP20.79■□□□□ 0.92
VPS52-215ENST00000464425 MROH7-TTC4A0A0A0MT08 1334 aa20.78■□□□□ 0.92
VPS52-215ENST00000464425 LDHCP07864 332 aa20.78■□□□□ 0.92
VPS52-215ENST00000464425 TCP10Q12799 353 aa20.78■□□□□ 0.92
VPS52-215ENST00000464425 NFIAQ12857 509 aa20.78■□□□□ 0.92
VPS52-215ENST00000464425 FKBP1CQ5VVH2 108 aa20.78■□□□□ 0.92
VPS52-215ENST00000464425 ANTXR1Q9H6X2 564 aa20.78■□□□□ 0.92
VPS52-215ENST00000464425 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.78■□□□□ 0.92
VPS52-215ENST00000464425 AKAP11Q9UKA4 1901 aa20.78■□□□□ 0.92
VPS52-215ENST00000464425 MYH2Q9UKX2 1941 aa20.77■□□□□ 0.92
VPS52-215ENST00000464425 PPP1R12BO60237 982 aaPredicted RBP20.77■□□□□ 0.92
VPS52-215ENST00000464425 FAM83AQ86UY5 434 aa20.77■□□□□ 0.92
VPS52-215ENST00000464425 PAPPA2Q9BXP8 1791 aa20.77■□□□□ 0.91
VPS52-215ENST00000464425 SSC5DA1L4H1 1573 aa20.76■□□□□ 0.91
VPS52-215ENST00000464425 GPR75-ASB3A0A0A6YYF3 556 aa20.76■□□□□ 0.91
VPS52-215ENST00000464425 IDH1O75874 414 aaKnown RBP20.76■□□□□ 0.91
VPS52-215ENST00000464425 NAA16Q6N069 864 aaPredicted RBP20.76■□□□□ 0.91
VPS52-215ENST00000464425 CCDC102AQ96A19 550 aa20.76■□□□□ 0.91
VPS52-215ENST00000464425 ZIC5Q96T25 663 aa20.76■□□□□ 0.91
VPS52-215ENST00000464425 RWDD1Q9H446 243 aaPredicted RBP20.76■□□□□ 0.91
VPS52-215ENST00000464425 FAM155AB1AL88 458 aaPredicted RBP20.75■□□□□ 0.91
VPS52-215ENST00000464425 USP2O75604 605 aaPredicted RBP20.75■□□□□ 0.91
VPS52-215ENST00000464425 HSPA1AP0DMV8 641 aaKnown RBP20.75■□□□□ 0.91
VPS52-215ENST00000464425 HSPA1BP0DMV9 641 aaKnown RBP20.75■□□□□ 0.91
VPS52-215ENST00000464425 ZFPM1Q8IX07 1006 aa20.75■□□□□ 0.91
VPS52-215ENST00000464425 DNAJC2Q99543 621 aaKnown RBP20.75■□□□□ 0.91
VPS52-215ENST00000464425 BOLA2Q9H3K6 86 aa20.75■□□□□ 0.91
VPS52-215ENST00000464425 FAM198AQ9UFP1 575 aa20.75■□□□□ 0.91
VPS52-215ENST00000464425 MAP2K2P36507 400 aa20.74■□□□□ 0.91
VPS52-215ENST00000464425 LDLRAD1Q5T700 205 aa20.74■□□□□ 0.91
VPS52-215ENST00000464425 ERICH6BQ5W0A0 696 aa20.74■□□□□ 0.91
VPS52-215ENST00000464425 RASAL3Q86YV0 1011 aa20.74■□□□□ 0.91
VPS52-215ENST00000464425 FAM151AQ8WW52 585 aa20.74■□□□□ 0.91
VPS52-215ENST00000464425 GOLIM4O00461 696 aa20.73■□□□□ 0.91
VPS52-215ENST00000464425 SLC10A3P09131 477 aa20.73■□□□□ 0.91
VPS52-215ENST00000464425 ATP5JP18859 108 aa20.73■□□□□ 0.91
VPS52-215ENST00000464425 IREB2P48200 963 aaKnown RBP20.73■□□□□ 0.91
VPS52-215ENST00000464425 RGS3P49796 1198 aa20.73■□□□□ 0.91
VPS52-215ENST00000464425 RHBDL3P58872 404 aa20.73■□□□□ 0.91
VPS52-215ENST00000464425 NOGQ13253 232 aa20.73■□□□□ 0.91
VPS52-215ENST00000464425 PICALMQ13492 652 aa20.73■□□□□ 0.91
VPS52-215ENST00000464425 ADGRA1Q86SQ6 560 aa20.73■□□□□ 0.91
VPS52-215ENST00000464425 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.73■□□□□ 0.91
VPS52-215ENST00000464425 WDHD1O75717 1129 aaPredicted RBP20.72■□□□□ 0.91
VPS52-215ENST00000464425 CYP7A1P22680 504 aa20.72■□□□□ 0.91
VPS52-215ENST00000464425 MAP2K1Q02750 393 aaPredicted RBP20.72■□□□□ 0.91
VPS52-215ENST00000464425 MAP3K11Q16584 847 aa20.72■□□□□ 0.91
VPS52-215ENST00000464425 MIGA2Q7L4E1 593 aa20.72■□□□□ 0.91
VPS52-215ENST00000464425 MAGEB6Q8N7X4 407 aa20.72■□□□□ 0.91
VPS52-215ENST00000464425 EDC3Q96F86 508 aaKnown RBP20.72■□□□□ 0.91
VPS52-215ENST00000464425 CLMNQ96JQ2 1002 aa20.72■□□□□ 0.91
VPS52-215ENST00000464425 NOL10Q9BSC4 688 aaKnown RBP20.72■□□□□ 0.91
VPS52-215ENST00000464425 IDI2Q9BXS1 227 aa20.72■□□□□ 0.91
VPS52-215ENST00000464425 WBP1LQ9NX94 342 aa20.72■□□□□ 0.91
VPS52-215ENST00000464425 AATFQ9NY61 560 aaKnown RBP eCLIP20.72■□□□□ 0.91
VPS52-215ENST00000464425 KIF23Q02241 960 aaPredicted RBP20.71■□□□□ 0.91
VPS52-215ENST00000464425 MAP3K12Q12852 859 aa20.71■□□□□ 0.91
VPS52-215ENST00000464425 MKRN3Q13064 507 aaKnown RBP20.71■□□□□ 0.91
VPS52-215ENST00000464425 TTF1Q15361 905 aaPredicted RBP20.71■□□□□ 0.91
VPS52-215ENST00000464425 SH3RF3Q8TEJ3 882 aaPredicted RBP20.71■□□□□ 0.91
VPS52-215ENST00000464425 GCC1Q96CN9 775 aa20.71■□□□□ 0.91
VPS52-215ENST00000464425 SLC10A4Q96EP9 437 aa20.71■□□□□ 0.91
VPS52-215ENST00000464425 DDX4Q9NQI0 724 aaKnown RBP20.71■□□□□ 0.91
VPS52-215ENST00000464425 BAG3O95817 575 aa20.7■□□□□ 0.9
VPS52-215ENST00000464425 ANKRD45Q5TZF3 282 aa20.7■□□□□ 0.9
VPS52-215ENST00000464425 TSHZ3Q63HK5 1081 aa20.7■□□□□ 0.9
VPS52-215ENST00000464425 ZSCAN29Q8IWY8 852 aaPredicted RBP20.7■□□□□ 0.9
VPS52-215ENST00000464425 AIDAQ96BJ3 306 aa20.7■□□□□ 0.9
VPS52-215ENST00000464425 ECHDC1Q9NTX5 307 aa20.7■□□□□ 0.9
VPS52-215ENST00000464425 MYO5AQ9Y4I1 1855 aaKnown RBP20.69■□□□□ 0.9
VPS52-215ENST00000464425 ENTPD3O75355 529 aa20.69■□□□□ 0.9
VPS52-215ENST00000464425 IGHDP01880 384 aa20.69■□□□□ 0.9
VPS52-215ENST00000464425 TEX11Q8IYF3 940 aa20.69■□□□□ 0.9
VPS52-215ENST00000464425 HOOK2Q96ED9 719 aa20.69■□□□□ 0.9
VPS52-215ENST00000464425 HAUS7Q99871 368 aa20.69■□□□□ 0.9
VPS52-215ENST00000464425 PAG1Q9NWQ8 432 aa20.69■□□□□ 0.9
VPS52-215ENST00000464425 ZBTB47Q9UFB7 747 aaPredicted RBP20.69■□□□□ 0.9
VPS52-215ENST00000464425 IGSF3O75054 1194 aa20.68■□□□□ 0.9
VPS52-215ENST00000464425 PPP4CP60510 307 aa20.68■□□□□ 0.9
VPS52-215ENST00000464425 DYNLL1P63167 89 aaKnown RBP20.68■□□□□ 0.9
VPS52-215ENST00000464425 MAP3K9P80192 1104 aa20.68■□□□□ 0.9
VPS52-215ENST00000464425 SH3BP5LQ7L8J4 393 aa20.68■□□□□ 0.9
VPS52-215ENST00000464425 ANKRD13AQ8IZ07 590 aa20.68■□□□□ 0.9
VPS52-215ENST00000464425 MIGA1Q8NAN2 632 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms