RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 PFKFB1P16118 471 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 KIF5BP33176 963 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 UBXN1Q04323 297 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 NAA30Q147X3 362 aaPredicted RBP10.33□□□□□ -0.76
HPS4-208ENST00000464362 ERO1AQ96HE7 468 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 GDAP1L1Q96MZ0 367 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 LLPHQ9BRT6 129 aaKnown RBP10.33□□□□□ -0.76
HPS4-208ENST00000464362 IL25Q9H293 177 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 OGFRQ9NZT2 677 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 PTCH1Q13635 1447 aa10.32□□□□□ -0.76
HPS4-208ENST00000464362 AATKQ6ZMQ8 1374 aa10.32□□□□□ -0.76
HPS4-208ENST00000464362 PRPF4BQ13523 1007 aaKnown RBP10.32□□□□□ -0.76
HPS4-208ENST00000464362 EPHA10Q5JZY3 1008 aa10.32□□□□□ -0.76
HPS4-208ENST00000464362 NBPF5PQ86XG9 351 aaPredicted RBP10.32□□□□□ -0.76
HPS4-208ENST00000464362 IGSF22Q8N9C0 903 aa10.32□□□□□ -0.76
HPS4-208ENST00000464362 AIFM3Q96NN9 605 aa10.32□□□□□ -0.76
HPS4-208ENST00000464362 PPP1R1BQ9UD71 204 aaPredicted RBP10.32□□□□□ -0.76
HPS4-208ENST00000464362 RSPH14Q9UHP6 348 aa10.32□□□□□ -0.76
HPS4-208ENST00000464362 PPP2R3AQ06190 1150 aa10.32□□□□□ -0.76
HPS4-208ENST00000464362 DPCR1Q3MIW9 517 aa10.32□□□□□ -0.76
HPS4-208ENST00000464362 CCDC191Q8NCU4 936 aa10.32□□□□□ -0.76
HPS4-208ENST00000464362 HINFPQ9BQA5 517 aa10.32□□□□□ -0.76
HPS4-208ENST00000464362 VPS54Q9P1Q0 977 aa10.32□□□□□ -0.76
HPS4-208ENST00000464362 VPS18Q9P253 973 aa10.32□□□□□ -0.76
HPS4-208ENST00000464362 SSH2Q76I76 1423 aa10.32□□□□□ -0.76
HPS4-208ENST00000464362 TSPY3P0CV98 308 aa10.32□□□□□ -0.76
HPS4-208ENST00000464362 TSPY8P0CW00 308 aa10.32□□□□□ -0.76
HPS4-208ENST00000464362 CAPN2P17655 700 aa10.32□□□□□ -0.76
HPS4-208ENST00000464362 IQCEQ6IPM2 695 aa10.32□□□□□ -0.76
HPS4-208ENST00000464362 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.32□□□□□ -0.76
HPS4-208ENST00000464362 TMTC2Q8N394 836 aa10.32□□□□□ -0.76
HPS4-208ENST00000464362 TIGD1Q96MW7 591 aa10.32□□□□□ -0.76
HPS4-208ENST00000464362 CRNKL1Q9BZJ0 848 aaKnown RBP10.32□□□□□ -0.76
HPS4-208ENST00000464362 BTBD18B2RXH4 712 aa10.31□□□□□ -0.76
HPS4-208ENST00000464362 PDIA3P30101 505 aaKnown RBP10.31□□□□□ -0.76
HPS4-208ENST00000464362 KIAA1524Q8TCG1 905 aa10.31□□□□□ -0.76
HPS4-208ENST00000464362 PSMB7Q99436 277 aa10.31□□□□□ -0.76
HPS4-208ENST00000464362 CTAGE9A4FU28 777 aa10.31□□□□□ -0.76
HPS4-208ENST00000464362 MAP9Q49MG5 647 aa10.31□□□□□ -0.76
HPS4-208ENST00000464362 PIK3AP1Q6ZUJ8 805 aa10.31□□□□□ -0.76
HPS4-208ENST00000464362 CALML4Q96GE6 196 aa10.31□□□□□ -0.76
HPS4-208ENST00000464362 EXOC1Q9NV70 894 aa10.31□□□□□ -0.76
HPS4-208ENST00000464362 RDXP35241 583 aaKnown RBP10.31□□□□□ -0.76
HPS4-208ENST00000464362 PICALMQ13492 652 aa10.31□□□□□ -0.76
HPS4-208ENST00000464362 NECTIN1Q15223 517 aa10.31□□□□□ -0.76
HPS4-208ENST00000464362 LRRC8AQ8IWT6 810 aa10.31□□□□□ -0.76
HPS4-208ENST00000464362 GOLGA1Q92805 767 aa10.31□□□□□ -0.76
HPS4-208ENST00000464362 BLZF1Q9H2G9 400 aa10.31□□□□□ -0.76
HPS4-208ENST00000464362 FANCLQ9NW38 375 aa10.31□□□□□ -0.76
HPS4-208ENST00000464362 USP8P40818 1118 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 TERF1P54274 439 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 FEZ1Q99689 392 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 SERTAD1Q9UHV2 236 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 CTNND2Q9UQB3 1225 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 MACROD2A1Z1Q3 448 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 PSMA7O14818 248 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 PHKG2P15735 406 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 SSR1P43307 286 aaKnown RBP10.3□□□□□ -0.76
HPS4-208ENST00000464362 NAPAP54920 295 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 TMEM266Q2M3C6 531 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 ADALQ6DHV7 355 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 SMAP1Q8IYB5 467 aaPredicted RBP10.3□□□□□ -0.76
HPS4-208ENST00000464362 KDRP35968 1356 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 AKR1B15C9JRZ8 316 aaPredicted RBP10.3□□□□□ -0.76
HPS4-208ENST00000464362 PFKFB2O60825 505 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 ATP2C2O75185 946 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 KRT2P35908 639 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 NLRP12P59046 1061 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 RNF187Q5TA31 235 aaPredicted RBP10.3□□□□□ -0.76
HPS4-208ENST00000464362 NSUN7Q8NE18 718 aaKnown RBP10.3□□□□□ -0.76
HPS4-208ENST00000464362 NGLY1Q96IV0 654 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 HAUS7Q99871 368 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 PLEKHA4Q9H4M7 779 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 BTG4Q9NY30 223 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 TAB2Q9NYJ8 693 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 SNAP23O00161 211 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 RNASE9P60153 205 aaKnown RBP10.3□□□□□ -0.76
HPS4-208ENST00000464362 SDR42E1Q8WUS8 393 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 TSG101Q99816 390 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 GOPCQ9HD26 462 aa10.3□□□□□ -0.76
HPS4-208ENST00000464362 WDHD1O75717 1129 aaPredicted RBP10.29□□□□□ -0.76
HPS4-208ENST00000464362 IQUBQ8NA54 791 aa10.29□□□□□ -0.76
HPS4-208ENST00000464362 TFCP2L1Q9NZI6 479 aa10.29□□□□□ -0.76
HPS4-208ENST00000464362 WWC3Q9ULE0 1092 aa10.29□□□□□ -0.76
HPS4-208ENST00000464362 LETM2Q2VYF4 491 aa10.29□□□□□ -0.76
HPS4-208ENST00000464362 RILPL1Q5EBL4 403 aa10.29□□□□□ -0.76
HPS4-208ENST00000464362 C10orf67Q8IYJ2 551 aa10.29□□□□□ -0.76
HPS4-208ENST00000464362 DSCC1Q9BVC3 393 aa10.29□□□□□ -0.76
HPS4-208ENST00000464362 ZNF287Q9HBT7 754 aa10.29□□□□□ -0.76
HPS4-208ENST00000464362 COPRSQ9NQ92 184 aa10.29□□□□□ -0.76
HPS4-208ENST00000464362 LUC7L2Q9Y383 392 aaKnown RBP10.29□□□□□ -0.76
HPS4-208ENST00000464362 USP6P35125 1406 aa10.29□□□□□ -0.76
HPS4-208ENST00000464362 NEFHP12036 1026 aa10.29□□□□□ -0.76
HPS4-208ENST00000464362 EIF6P56537 245 aaKnown RBP10.29□□□□□ -0.76
HPS4-208ENST00000464362 PTPN12Q05209 780 aaKnown RBP10.29□□□□□ -0.76
HPS4-208ENST00000464362 ATL3Q6DD88 541 aa10.29□□□□□ -0.76
HPS4-208ENST00000464362 MAATS1Q7Z4T9 603 aa10.29□□□□□ -0.76
HPS4-208ENST00000464362 FBXO18Q8NFZ0 1043 aa10.29□□□□□ -0.76
HPS4-208ENST00000464362 GTPBP4Q9BZE4 634 aaKnown RBP10.29□□□□□ -0.76
HPS4-208ENST00000464362 RAB34Q9BZG1 259 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms