RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 MVPQ14764 893 aaKnown RBP25.44■■□□□ 1.66
PDLIM4-205ENST00000463615 DIXDC1Q155Q3 683 aa25.44■■□□□ 1.66
PDLIM4-205ENST00000463615 CDC42EP5Q6NZY7 148 aa25.44■■□□□ 1.66
PDLIM4-205ENST00000463615 FAM151AQ8WW52 585 aa25.44■■□□□ 1.66
PDLIM4-205ENST00000463615 OPTNQ96CV9 577 aa25.44■■□□□ 1.66
PDLIM4-205ENST00000463615 XAGE2Q96GT9 111 aa25.44■■□□□ 1.66
PDLIM4-205ENST00000463615 MS4A4AQ96JQ5 239 aa25.44■■□□□ 1.66
PDLIM4-205ENST00000463615 ELP3Q9H9T3 547 aa25.44■■□□□ 1.66
PDLIM4-205ENST00000463615 FKTNO75072 461 aa25.43■■□□□ 1.66
PDLIM4-205ENST00000463615 OTUD7BQ6GQQ9 843 aa25.43■■□□□ 1.66
PDLIM4-205ENST00000463615 GAKO14976 1311 aa25.42■■□□□ 1.66
PDLIM4-205ENST00000463615 POLA2Q14181 598 aa25.42■■□□□ 1.66
PDLIM4-205ENST00000463615 FAM163AQ96GL9 167 aaPredicted RBP25.42■■□□□ 1.66
PDLIM4-205ENST00000463615 CSADQ9Y600 493 aa25.42■■□□□ 1.66
PDLIM4-205ENST00000463615 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.42■■□□□ 1.66
PDLIM4-205ENST00000463615 SPDYE5A6NIY4 337 aa25.41■■□□□ 1.66
PDLIM4-205ENST00000463615 DCAF15Q66K64 600 aa25.41■■□□□ 1.66
PDLIM4-205ENST00000463615 PTPN18Q99952 460 aa25.41■■□□□ 1.66
PDLIM4-205ENST00000463615 SSH3Q8TE77 659 aa25.4■■□□□ 1.66
PDLIM4-205ENST00000463615 SNCAIPQ9Y6H5 919 aa25.4■■□□□ 1.66
PDLIM4-205ENST00000463615 GTF2A2P52657 109 aa25.39■■□□□ 1.66
PDLIM4-205ENST00000463615 G3BP1Q13283 466 aaKnown RBP eCLIP25.39■■□□□ 1.66
PDLIM4-205ENST00000463615 SPTY2D1Q68D10 685 aaPredicted RBP25.39■■□□□ 1.66
PDLIM4-205ENST00000463615 ERO1BQ86YB8 467 aa25.39■■□□□ 1.66
PDLIM4-205ENST00000463615 IDI2Q9BXS1 227 aa25.39■■□□□ 1.66
PDLIM4-205ENST00000463615 GPR108Q9NPR9 543 aa25.39■■□□□ 1.66
PDLIM4-205ENST00000463615 FAM198AQ9UFP1 575 aa25.39■■□□□ 1.66
PDLIM4-205ENST00000463615 ZNF112Q9UJU3 913 aa25.39■■□□□ 1.66
PDLIM4-205ENST00000463615 ATP8B2P98198 1209 aa25.38■■□□□ 1.65
PDLIM4-205ENST00000463615 NFIAQ12857 509 aa25.38■■□□□ 1.65
PDLIM4-205ENST00000463615 SLF2Q8IX21 1173 aa25.38■■□□□ 1.65
PDLIM4-205ENST00000463615 CNKSR2Q8WXI2 1034 aa25.38■■□□□ 1.65
PDLIM4-205ENST00000463615 WRNIP1Q96S55 665 aa25.38■■□□□ 1.65
PDLIM4-205ENST00000463615 ZNF341Q9BYN7 854 aa25.38■■□□□ 1.65
PDLIM4-205ENST00000463615 USP40Q9NVE5 1235 aa25.38■■□□□ 1.65
PDLIM4-205ENST00000463615 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.38■■□□□ 1.65
PDLIM4-205ENST00000463615 RFX7Q2KHR2 1363 aa25.38■■□□□ 1.65
PDLIM4-205ENST00000463615 ZBTB7BO15156 539 aaPredicted RBP25.37■■□□□ 1.65
PDLIM4-205ENST00000463615 ARID4AP29374 1257 aaPredicted RBP25.37■■□□□ 1.65
PDLIM4-205ENST00000463615 BRI3BPQ8WY22 251 aa25.37■■□□□ 1.65
PDLIM4-205ENST00000463615 ENTPD3O75355 529 aa25.36■■□□□ 1.65
PDLIM4-205ENST00000463615 CRHR2Q13324 411 aa25.36■■□□□ 1.65
PDLIM4-205ENST00000463615 FBXO46Q6PJ61 603 aaPredicted RBP25.36■■□□□ 1.65
PDLIM4-205ENST00000463615 FTSJ3Q8IY81 847 aaKnown RBP25.36■■□□□ 1.65
PDLIM4-205ENST00000463615 NEUROD6Q96NK8 337 aa25.36■■□□□ 1.65
PDLIM4-205ENST00000463615 HMG20BQ9P0W2 317 aa25.36■■□□□ 1.65
PDLIM4-205ENST00000463615 HPS5Q9UPZ3 1129 aa25.36■■□□□ 1.65
PDLIM4-205ENST00000463615 MYH2Q9UKX2 1941 aa25.35■■□□□ 1.65
PDLIM4-205ENST00000463615 RLBP1P12271 317 aa25.35■■□□□ 1.65
PDLIM4-205ENST00000463615 DZIP1Q86YF9 867 aaKnown RBP25.35■■□□□ 1.65
PDLIM4-205ENST00000463615 OTUD5Q96G74 571 aa25.35■■□□□ 1.65
PDLIM4-205ENST00000463615 ZCCHC17Q9NP64 241 aaKnown RBP25.35■■□□□ 1.65
PDLIM4-205ENST00000463615 ABCF2Q9UG63 623 aa25.35■■□□□ 1.65
PDLIM4-205ENST00000463615 CCL15-CCL14A0A0B4J2E2 113 aa25.34■■□□□ 1.65
PDLIM4-205ENST00000463615 MLLT1Q03111 559 aaPredicted RBP25.34■■□□□ 1.65
PDLIM4-205ENST00000463615 TCP10Q12799 353 aa25.34■■□□□ 1.65
PDLIM4-205ENST00000463615 PPIL2Q13356 520 aa25.34■■□□□ 1.65
PDLIM4-205ENST00000463615 CCL15Q16663 113 aa25.34■■□□□ 1.65
PDLIM4-205ENST00000463615 SPATA5Q8NB90 893 aa25.34■■□□□ 1.65
PDLIM4-205ENST00000463615 ZKSCAN4Q969J2 545 aaPredicted RBP25.34■■□□□ 1.65
PDLIM4-205ENST00000463615 NOP58Q9Y2X3 529 aaKnown RBP25.34■■□□□ 1.65
PDLIM4-205ENST00000463615 ATRNL1Q5VV63 1379 aa25.33■■□□□ 1.65
PDLIM4-205ENST00000463615 UQCRFS1P1P0C7P4 283 aa25.33■■□□□ 1.65
PDLIM4-205ENST00000463615 PPATQ06203 517 aa25.33■■□□□ 1.65
PDLIM4-205ENST00000463615 NOL9Q5SY16 702 aaKnown RBP25.33■■□□□ 1.65
PDLIM4-205ENST00000463615 ERICH6Q7L0X2 663 aa25.33■■□□□ 1.65
PDLIM4-205ENST00000463615 MIGA2Q7L4E1 593 aa25.33■■□□□ 1.65
PDLIM4-205ENST00000463615 MROH7-TTC4A0A0A0MT08 1334 aa25.33■■□□□ 1.64
PDLIM4-205ENST00000463615 GPR75-ASB3A0A0A6YYF3 556 aa25.32■■□□□ 1.64
PDLIM4-205ENST00000463615 NPM3O75607 178 aaKnown RBP25.32■■□□□ 1.64
PDLIM4-205ENST00000463615 MAP4K4O95819 1239 aaPredicted RBP25.32■■□□□ 1.64
PDLIM4-205ENST00000463615 CETPP11597 493 aa25.32■■□□□ 1.64
PDLIM4-205ENST00000463615 MAP3K10Q02779 954 aa25.32■■□□□ 1.64
PDLIM4-205ENST00000463615 GORABQ5T7V8 394 aa25.32■■□□□ 1.64
PDLIM4-205ENST00000463615 ITPRIPQ8IWB1 547 aa25.32■■□□□ 1.64
PDLIM4-205ENST00000463615 ZNF384Q8TF68 577 aa25.32■■□□□ 1.64
PDLIM4-205ENST00000463615 IRF6O14896 467 aa25.31■■□□□ 1.64
PDLIM4-205ENST00000463615 WDHD1O75717 1129 aaPredicted RBP25.31■■□□□ 1.64
PDLIM4-205ENST00000463615 INPP5BP32019 993 aa25.31■■□□□ 1.64
PDLIM4-205ENST00000463615 RGS3P49796 1198 aa25.31■■□□□ 1.64
PDLIM4-205ENST00000463615 MECOMQ03112 1051 aa25.31■■□□□ 1.64
PDLIM4-205ENST00000463615 SNAPC2Q13487 334 aa25.31■■□□□ 1.64
PDLIM4-205ENST00000463615 ZFPM1Q8IX07 1006 aa25.31■■□□□ 1.64
PDLIM4-205ENST00000463615 ERO1AQ96HE7 468 aa25.31■■□□□ 1.64
PDLIM4-205ENST00000463615 IGSF3O75054 1194 aa25.3■■□□□ 1.64
PDLIM4-205ENST00000463615 TNNI3KQ59H18 835 aa25.3■■□□□ 1.64
PDLIM4-205ENST00000463615 FAM43AQ8N2R8 423 aa25.3■■□□□ 1.64
PDLIM4-205ENST00000463615 NSUN4Q96CB9 384 aaKnown RBP25.3■■□□□ 1.64
PDLIM4-205ENST00000463615 ZNF512BQ96KM6 892 aaPredicted RBP25.3■■□□□ 1.64
PDLIM4-205ENST00000463615 FPGT-TNNI3KV9GXZ4 949 aa25.3■■□□□ 1.64
PDLIM4-205ENST00000463615 MCAMP43121 646 aa25.29■■□□□ 1.64
PDLIM4-205ENST00000463615 BTDP43251 543 aa25.29■■□□□ 1.64
PDLIM4-205ENST00000463615 RHBDL3P58872 404 aa25.29■■□□□ 1.64
PDLIM4-205ENST00000463615 GSTO1P78417 241 aa25.29■■□□□ 1.64
PDLIM4-205ENST00000463615 SP3Q02447 781 aa25.29■■□□□ 1.64
PDLIM4-205ENST00000463615 OTOP1Q7RTM1 612 aa25.29■■□□□ 1.64
PDLIM4-205ENST00000463615 ZFYVE28Q9HCC9 887 aa25.29■■□□□ 1.64
PDLIM4-205ENST00000463615 KCNH4Q9UQ05 1017 aa25.29■■□□□ 1.64
PDLIM4-205ENST00000463615 SURF6O75683 361 aaKnown RBP25.28■■□□□ 1.64
PDLIM4-205ENST00000463615 LDHCP07864 332 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms