RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 SALL3Q9BXA9 1300 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 USP27XA6NNY8 438 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 GNPATO15228 680 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 HMMRO75330 724 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 TNNT3P45378 269 aaPredicted RBP10.1□□□□□ -0.79
SHQ1-203ENST00000463369 CCT4P50991 539 aaKnown RBP10.1□□□□□ -0.79
SHQ1-203ENST00000463369 RC3H1Q5TC82 1133 aaKnown RBP10.1□□□□□ -0.79
SHQ1-203ENST00000463369 ANKRD13DQ6ZTN6 518 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 DNAAF4Q8WXU2 420 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 TTC14Q96N46 770 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 GNL3LQ9NVN8 582 aaKnown RBP10.1□□□□□ -0.79
SHQ1-203ENST00000463369 PRR12Q9ULL5 1215 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 CNTNAP4Q9C0A0 1308 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 ATG7O95352 703 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 PLA2G4AP47712 749 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 KCNQ4P56696 695 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 SLC27A3Q5K4L6 730 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 TEX35Q5T0J7 233 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 SLC4A10Q6U841 1118 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 TXLNBQ8N3L3 684 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 GTF3C6Q969F1 213 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 LIMCH1Q9UPQ0 1083 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 MTMR6Q9Y217 621 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 MAP3K2Q9Y2U5 619 aa10.1□□□□□ -0.79
SHQ1-203ENST00000463369 APBA3O96018 575 aa10.09□□□□□ -0.79
SHQ1-203ENST00000463369 NOP2P46087 812 aaKnown RBP10.09□□□□□ -0.79
SHQ1-203ENST00000463369 EIF5P55010 431 aaKnown RBP10.09□□□□□ -0.79
SHQ1-203ENST00000463369 HDLBPQ00341 1268 aaKnown RBP10.09□□□□□ -0.79
SHQ1-203ENST00000463369 CAMK4Q16566 473 aa10.09□□□□□ -0.79
SHQ1-203ENST00000463369 RIC3Q7Z5B4 369 aa10.09□□□□□ -0.79
SHQ1-203ENST00000463369 PLBD2Q8NHP8 589 aa10.09□□□□□ -0.79
SHQ1-203ENST00000463369 MEIS3Q99687 375 aa10.09□□□□□ -0.79
SHQ1-203ENST00000463369 RASSF4Q9H2L5 321 aa10.09□□□□□ -0.79
SHQ1-203ENST00000463369 KCND1Q9NSA2 647 aa10.09□□□□□ -0.79
SHQ1-203ENST00000463369 LRRC4BQ9NT99 713 aa10.09□□□□□ -0.79
SHQ1-203ENST00000463369 RSPH14Q9UHP6 348 aa10.09□□□□□ -0.79
SHQ1-203ENST00000463369 MYH3P11055 1940 aa10.08□□□□□ -0.8
SHQ1-203ENST00000463369 PNMA6AP0CW24 399 aaPredicted RBP10.08□□□□□ -0.8
SHQ1-203ENST00000463369 LIG1P18858 919 aa10.08□□□□□ -0.8
SHQ1-203ENST00000463369 HMGB2P26583 209 aaKnown RBP10.08□□□□□ -0.8
SHQ1-203ENST00000463369 AK2P54819 239 aa10.08□□□□□ -0.8
SHQ1-203ENST00000463369 TSHZ3Q63HK5 1081 aa10.08□□□□□ -0.8
SHQ1-203ENST00000463369 RBM43Q6ZSC3 357 aaKnown RBP10.08□□□□□ -0.8
SHQ1-203ENST00000463369 TTLL7Q6ZT98 887 aa10.08□□□□□ -0.8
SHQ1-203ENST00000463369 RUFY3Q7L099 469 aa10.08□□□□□ -0.8
SHQ1-203ENST00000463369 RILPL2Q969X0 211 aa10.08□□□□□ -0.8
SHQ1-203ENST00000463369 TNMDQ9H2S6 317 aa10.08□□□□□ -0.8
SHQ1-203ENST00000463369 GEMIN8Q9NWZ8 242 aaKnown RBP10.08□□□□□ -0.8
SHQ1-203ENST00000463369 KIF2AO00139 706 aaPredicted RBP10.08□□□□□ -0.8
SHQ1-203ENST00000463369 ABCB7O75027 752 aa10.08□□□□□ -0.8
SHQ1-203ENST00000463369 WDHD1O75717 1129 aaPredicted RBP10.08□□□□□ -0.8
SHQ1-203ENST00000463369 SKILP12757 684 aa10.08□□□□□ -0.8
SHQ1-203ENST00000463369 IBSPP21815 317 aaPredicted RBP10.08□□□□□ -0.8
SHQ1-203ENST00000463369 CLCN6P51797 869 aa10.08□□□□□ -0.8
SHQ1-203ENST00000463369 PLEKHG6Q3KR16 790 aa10.08□□□□□ -0.8
SHQ1-203ENST00000463369 BEND3Q5T5X7 828 aa10.08□□□□□ -0.8
SHQ1-203ENST00000463369 CKAP2LQ8IYA6 745 aa10.08□□□□□ -0.8
SHQ1-203ENST00000463369 METTL22Q9BUU2 404 aaPredicted RBP10.08□□□□□ -0.8
SHQ1-203ENST00000463369 CRISPLD2Q9H0B8 497 aa10.08□□□□□ -0.8
SHQ1-203ENST00000463369 L2HGDHQ9H9P8 463 aa10.08□□□□□ -0.8
SHQ1-203ENST00000463369 ELP1O95163 1332 aa10.08□□□□□ -0.8
SHQ1-203ENST00000463369 SCN7AQ01118 1682 aa10.07□□□□□ -0.8
SHQ1-203ENST00000463369 QSER1Q2KHR3 1735 aa10.07□□□□□ -0.8
SHQ1-203ENST00000463369 NPHP1O15259 732 aa10.07□□□□□ -0.8
SHQ1-203ENST00000463369 ZRANB2O95218 330 aaKnown RBP eCLIP10.07□□□□□ -0.8
SHQ1-203ENST00000463369 GJB2P29033 226 aa10.07□□□□□ -0.8
SHQ1-203ENST00000463369 ZNF165P49910 485 aa10.07□□□□□ -0.8
SHQ1-203ENST00000463369 RHBDL3P58872 404 aa10.07□□□□□ -0.8
SHQ1-203ENST00000463369 TPM4P67936 248 aa10.07□□□□□ -0.8
SHQ1-203ENST00000463369 TXNRD1Q16881 649 aa10.07□□□□□ -0.8
SHQ1-203ENST00000463369 ERCC6LQ2NKX8 1250 aa10.07□□□□□ -0.8
SHQ1-203ENST00000463369 TTC6Q86TZ1 520 aa10.07□□□□□ -0.8
SHQ1-203ENST00000463369 CCAR2Q8N163 923 aaKnown RBP10.07□□□□□ -0.8
SHQ1-203ENST00000463369 CASZ1Q86V15 1759 aa10.07□□□□□ -0.8
SHQ1-203ENST00000463369 SOWAHDA6NJG2 315 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 RPS6KA4O75676 772 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 ALDH1L1O75891 902 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 CAVIN2O95810 425 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 CTR9Q6PD62 1173 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 SARM1Q6SZW1 724 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 SYT10Q6XYQ8 523 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 KIF6Q6ZMV9 814 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 LINS1Q8NG48 757 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 NEK11Q8NG66 645 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 MRFAP1L1Q96HT8 127 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 PRKAG2Q9UGJ0 569 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 STAP2Q9UGK3 403 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 SNX14Q9Y5W7 946 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 MAP3K15Q6ZN16 1313 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 ERVV-1B6SEH8 477 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 HOXA2O43364 376 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 DHX16O60231 1041 aaKnown RBP10.06□□□□□ -0.8
SHQ1-203ENST00000463369 KRT85P78386 507 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 NEXNQ0ZGT2 675 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 ARID5BQ14865 1188 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 CCDC93Q567U6 631 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 FBXO33Q7Z6M2 555 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 DDX19AQ9NUU7 478 aaKnown RBP10.06□□□□□ -0.8
SHQ1-203ENST00000463369 TRMT1Q9NXH9 659 aaKnown RBP10.06□□□□□ -0.8
SHQ1-203ENST00000463369 DACT1Q9NYF0 836 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms