RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 PTPRAP18433 802 aa6.75□□□□□ -1.33
VRK2-208ENST00000463222 ARNTP27540 789 aa6.75□□□□□ -1.33
VRK2-208ENST00000463222 CDC25BP30305 580 aa6.75□□□□□ -1.33
VRK2-208ENST00000463222 PTPN11Q06124 597 aaPredicted RBP6.75□□□□□ -1.33
VRK2-208ENST00000463222 RAB33AQ14088 237 aa6.75□□□□□ -1.33
VRK2-208ENST00000463222 NBPF6Q5VWK0 638 aa6.75□□□□□ -1.33
VRK2-208ENST00000463222 GDF6Q6KF10 455 aaPredicted RBP6.75□□□□□ -1.33
VRK2-208ENST00000463222 MPRIPQ6WCQ1 1025 aa6.75□□□□□ -1.33
VRK2-208ENST00000463222 SULF2Q8IWU5 870 aa6.75□□□□□ -1.33
VRK2-208ENST00000463222 NBPF4Q96M43 638 aa6.75□□□□□ -1.33
VRK2-208ENST00000463222 SRPK1Q96SB4 655 aaKnown RBP6.75□□□□□ -1.33
VRK2-208ENST00000463222 ADAM19Q9H013 955 aa6.75□□□□□ -1.33
VRK2-208ENST00000463222 BRMS1Q9HCU9 246 aa6.75□□□□□ -1.33
VRK2-208ENST00000463222 SIRPGQ9P1W8 387 aa6.75□□□□□ -1.33
VRK2-208ENST00000463222 PRKAG3Q9UGI9 489 aa6.75□□□□□ -1.33
VRK2-208ENST00000463222 GDF2Q9UK05 429 aaPredicted RBP6.75□□□□□ -1.33
VRK2-208ENST00000463222 NAGPAQ9UK23 515 aa6.75□□□□□ -1.33
VRK2-208ENST00000463222 CYP8B1Q9UNU6 501 aa6.75□□□□□ -1.33
VRK2-208ENST00000463222 MRPL42Q9Y6G3 142 aaKnown RBP6.75□□□□□ -1.33
VRK2-208ENST00000463222 CCDC85CA6NKD9 419 aa6.74□□□□□ -1.33
VRK2-208ENST00000463222 U2SURPO15042 1029 aaKnown RBP6.74□□□□□ -1.33
VRK2-208ENST00000463222 ESRRAP11474 423 aaPredicted RBP6.74□□□□□ -1.33
VRK2-208ENST00000463222 ADH7P40394 386 aa6.74□□□□□ -1.33
VRK2-208ENST00000463222 SNRPNP63162 240 aaKnown RBP6.74□□□□□ -1.33
VRK2-208ENST00000463222 CLCQ05315 142 aa6.74□□□□□ -1.33
VRK2-208ENST00000463222 HGSNATQ68CP4 663 aa6.74□□□□□ -1.33
VRK2-208ENST00000463222 GK5Q6ZS86 529 aa6.74□□□□□ -1.33
VRK2-208ENST00000463222 CCDC84Q86UT8 332 aaPredicted RBP6.74□□□□□ -1.33
VRK2-208ENST00000463222 FAM169BQ8N8A8 192 aa6.74□□□□□ -1.33
VRK2-208ENST00000463222 FERD3LQ96RJ6 166 aa6.74□□□□□ -1.33
VRK2-208ENST00000463222 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.74□□□□□ -1.33
VRK2-208ENST00000463222 FAM221BA6H8Z2 402 aa6.73□□□□□ -1.33
VRK2-208ENST00000463222 SHISA8B8ZZ34 492 aa6.73□□□□□ -1.33
VRK2-208ENST00000463222 SOX1O00570 391 aaPredicted RBP6.73□□□□□ -1.33
VRK2-208ENST00000463222 CILPO75339 1184 aa6.73□□□□□ -1.33
VRK2-208ENST00000463222 EIF6P56537 245 aaKnown RBP6.73□□□□□ -1.33
VRK2-208ENST00000463222 MPP2Q14168 576 aa6.73□□□□□ -1.33
VRK2-208ENST00000463222 LRRC14Q15048 493 aa6.73□□□□□ -1.33
VRK2-208ENST00000463222 TCEAL1Q15170 157 aa6.73□□□□□ -1.33
VRK2-208ENST00000463222 CWF19L2Q2TBE0 894 aaKnown RBP6.73□□□□□ -1.33
VRK2-208ENST00000463222 EGFLAMQ63HQ2 1017 aa6.73□□□□□ -1.33
VRK2-208ENST00000463222 LLGL2Q6P1M3 1020 aa6.73□□□□□ -1.33
VRK2-208ENST00000463222 TNFRSF25Q93038 417 aa6.73□□□□□ -1.33
VRK2-208ENST00000463222 MKL1Q969V6 931 aa6.73□□□□□ -1.33
VRK2-208ENST00000463222 CRBNQ96SW2 442 aa6.73□□□□□ -1.33
VRK2-208ENST00000463222 LPIN3Q9BQK8 851 aa6.73□□□□□ -1.33
VRK2-208ENST00000463222 LRRC3Q9BY71 257 aa6.73□□□□□ -1.33
VRK2-208ENST00000463222 ST7Q9NRC1 585 aa6.73□□□□□ -1.33
VRK2-208ENST00000463222 KRBA1A5PL33 1030 aa6.72□□□□□ -1.33
VRK2-208ENST00000463222 NEURL1BA8MQ27 555 aa6.72□□□□□ -1.33
VRK2-208ENST00000463222 NCLP19338 710 aaKnown RBP6.72□□□□□ -1.33
VRK2-208ENST00000463222 CDK11BP21127 795 aaKnown RBP6.72□□□□□ -1.33
VRK2-208ENST00000463222 CDC27P30260 824 aa6.72□□□□□ -1.33
VRK2-208ENST00000463222 BAG6P46379 1132 aa6.72□□□□□ -1.33
VRK2-208ENST00000463222 ZNF165P49910 485 aa6.72□□□□□ -1.33
VRK2-208ENST00000463222 IKBKEQ14164 716 aa6.72□□□□□ -1.33
VRK2-208ENST00000463222 PSAPL1Q6NUJ1 521 aa6.72□□□□□ -1.33
VRK2-208ENST00000463222 GOLGA6L1Q8N7Z2 621 aa6.72□□□□□ -1.33
VRK2-208ENST00000463222 NUDT8Q8WV74 236 aa6.72□□□□□ -1.33
VRK2-208ENST00000463222 EMILIN2Q9BXX0 1053 aa6.72□□□□□ -1.33
VRK2-208ENST00000463222 ZC3H12CQ9C0D7 883 aaKnown RBP6.72□□□□□ -1.33
VRK2-208ENST00000463222 FAM177BA6PVY3 158 aa6.71□□□□□ -1.34
VRK2-208ENST00000463222 PIK3R2O00459 728 aa6.71□□□□□ -1.34
VRK2-208ENST00000463222 GRIN3BO60391 1043 aa6.71□□□□□ -1.34
VRK2-208ENST00000463222 BPNT1O95861 308 aa6.71□□□□□ -1.34
VRK2-208ENST00000463222 EPHA1P21709 976 aa6.71□□□□□ -1.34
VRK2-208ENST00000463222 COL8A1P27658 744 aa6.71□□□□□ -1.34
VRK2-208ENST00000463222 GIPRP48546 466 aa6.71□□□□□ -1.34
VRK2-208ENST00000463222 CDK8P49336 464 aa6.71□□□□□ -1.34
VRK2-208ENST00000463222 MAP1SQ66K74 1059 aaPredicted RBP6.71□□□□□ -1.34
VRK2-208ENST00000463222 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.71□□□□□ -1.34
VRK2-208ENST00000463222 SLCO4C1Q6ZQN7 724 aa6.71□□□□□ -1.34
VRK2-208ENST00000463222 CELF2-AS1Q8N7Q2 184 aa6.71□□□□□ -1.34
VRK2-208ENST00000463222 KCNB2Q92953 911 aa6.71□□□□□ -1.34
VRK2-208ENST00000463222 GAL3ST3Q96A11 431 aa6.71□□□□□ -1.34
VRK2-208ENST00000463222 DEPDC7Q96QD5 511 aa6.71□□□□□ -1.34
VRK2-208ENST00000463222 SNTG2Q9NY99 539 aa6.71□□□□□ -1.34
VRK2-208ENST00000463222 HOXB4P17483 251 aaPredicted RBP6.7□□□□□ -1.34
VRK2-208ENST00000463222 GSTM4Q03013 218 aa6.7□□□□□ -1.34
VRK2-208ENST00000463222 ZNF252P-AS1Q0IIN9 211 aa6.7□□□□□ -1.34
VRK2-208ENST00000463222 TXNDC11Q6PKC3 985 aa6.7□□□□□ -1.34
VRK2-208ENST00000463222 C1orf229Q6ZS94 237 aaPredicted RBP6.7□□□□□ -1.34
VRK2-208ENST00000463222 REC114Q7Z4M0 266 aa6.7□□□□□ -1.34
VRK2-208ENST00000463222 FCHSD1Q86WN1 690 aa6.7□□□□□ -1.34
VRK2-208ENST00000463222 EDARADDQ8WWZ3 215 aa6.7□□□□□ -1.34
VRK2-208ENST00000463222 SLC7A3Q8WY07 619 aa6.7□□□□□ -1.34
VRK2-208ENST00000463222 RNPC3Q96LT9 517 aaKnown RBP6.7□□□□□ -1.34
VRK2-208ENST00000463222 TNKS2Q9H2K2 1166 aa6.7□□□□□ -1.34
VRK2-208ENST00000463222 PCDHB14Q9Y5E9 798 aa6.7□□□□□ -1.34
VRK2-208ENST00000463222 ADARB2-AS1A8MUL3 147 aa6.69□□□□□ -1.34
VRK2-208ENST00000463222 RGS9O75916 674 aaPredicted RBP6.69□□□□□ -1.34
VRK2-208ENST00000463222 ARAFP10398 606 aa6.69□□□□□ -1.34
VRK2-208ENST00000463222 ADH6P28332 368 aa6.69□□□□□ -1.34
VRK2-208ENST00000463222 CABP4P57796 275 aa6.69□□□□□ -1.34
VRK2-208ENST00000463222 RPL6Q02878 288 aaKnown RBP6.69□□□□□ -1.34
VRK2-208ENST00000463222 TNNI3KQ59H18 835 aa6.69□□□□□ -1.34
VRK2-208ENST00000463222 DIEXFQ68CQ4 756 aaKnown RBP6.69□□□□□ -1.34
VRK2-208ENST00000463222 PDZD3Q86UT5 571 aa6.69□□□□□ -1.34
VRK2-208ENST00000463222 REXO1Q8N1G1 1221 aaKnown RBP6.69□□□□□ -1.34
VRK2-208ENST00000463222 DDX54Q8TDD1 881 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms