RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	GSTO1	P78417	241 aa		11.73	□□□□□ -0.53
PSMD4-208	ENST00000462970	CYP4F22	Q6NT55	531 aa		11.73	□□□□□ -0.53
PSMD4-208	ENST00000462970	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.73	□□□□□ -0.53
PSMD4-208	ENST00000462970	MAST2	Q6P0Q8	1798 aa		11.73	□□□□□ -0.53
PSMD4-208	ENST00000462970	MOB2	Q70IA6	237 aa		11.73	□□□□□ -0.53
PSMD4-208	ENST00000462970	CAPNS2	Q96L46	248 aa		11.73	□□□□□ -0.53
PSMD4-208	ENST00000462970	NOL10	Q9BSC4	688 aa	Known RBP	11.73	□□□□□ -0.53
PSMD4-208	ENST00000462970	PIH1D3	Q9NQM4	214 aa	Known RBP	11.73	□□□□□ -0.53
PSMD4-208	ENST00000462970	PAPPA2	Q9BXP8	1791 aa		11.72	□□□□□ -0.53
PSMD4-208	ENST00000462970	RASSF10	A6NK89	507 aa		11.72	□□□□□ -0.53
PSMD4-208	ENST00000462970	UBE2Q2L	H0YL09	131 aa		11.72	□□□□□ -0.53
PSMD4-208	ENST00000462970	IDH1	O75874	414 aa	Known RBP	11.72	□□□□□ -0.53
PSMD4-208	ENST00000462970	CYP2E1	P05181	493 aa	Predicted RBP	11.72	□□□□□ -0.53
PSMD4-208	ENST00000462970	LDHC	P07864	332 aa		11.72	□□□□□ -0.53
PSMD4-208	ENST00000462970	BTD	P43251	543 aa		11.72	□□□□□ -0.53
PSMD4-208	ENST00000462970	TCP10	Q12799	353 aa		11.72	□□□□□ -0.53
PSMD4-208	ENST00000462970	NAA16	Q6N069	864 aa	Predicted RBP	11.72	□□□□□ -0.53
PSMD4-208	ENST00000462970	CDC42EP5	Q6NZY7	148 aa		11.72	□□□□□ -0.53
PSMD4-208	ENST00000462970	SAPCD2	Q86UD0	394 aa		11.72	□□□□□ -0.53
PSMD4-208	ENST00000462970	TNS4	Q8IZW8	715 aa		11.72	□□□□□ -0.53
PSMD4-208	ENST00000462970	MRI	Q9BWK5	157 aa		11.72	□□□□□ -0.53
PSMD4-208	ENST00000462970	TMEM39B	Q9GZU3	492 aa		11.72	□□□□□ -0.53
PSMD4-208	ENST00000462970	FZD1	Q9UP38	647 aa		11.72	□□□□□ -0.53
PSMD4-208	ENST00000462970	PPP2R3B	Q9Y5P8	575 aa		11.72	□□□□□ -0.53
PSMD4-208	ENST00000462970	MROH7-TTC4	A0A0A0MT08	1334 aa		11.71	□□□□□ -0.53
PSMD4-208	ENST00000462970	WDR33	Q9C0J8	1336 aa	Known RBP	11.71	□□□□□ -0.53
PSMD4-208	ENST00000462970	GOLIM4	O00461	696 aa		11.71	□□□□□ -0.53
PSMD4-208	ENST00000462970	ECE1	P42892	770 aa		11.71	□□□□□ -0.53
PSMD4-208	ENST00000462970	ZNF157	P51786	506 aa	Predicted RBP	11.71	□□□□□ -0.53
PSMD4-208	ENST00000462970	SUPT20HL1	Q3ZLR7	823 aa		11.71	□□□□□ -0.53
PSMD4-208	ENST00000462970	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.71	□□□□□ -0.53
PSMD4-208	ENST00000462970	ARMC9	Q7Z3E5	817 aa		11.71	□□□□□ -0.53
PSMD4-208	ENST00000462970	NSUN4	Q96CB9	384 aa	Known RBP	11.71	□□□□□ -0.53
PSMD4-208	ENST00000462970	GPATCH3	Q96I76	525 aa		11.71	□□□□□ -0.53
PSMD4-208	ENST00000462970	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.71	□□□□□ -0.53
PSMD4-208	ENST00000462970	BOLA2	Q9H3K6	86 aa		11.71	□□□□□ -0.53
PSMD4-208	ENST00000462970	ANGEL1	Q9UNK9	670 aa	Known RBP	11.71	□□□□□ -0.53
PSMD4-208	ENST00000462970	FOXN1	O15353	648 aa		11.7	□□□□□ -0.54
PSMD4-208	ENST00000462970	AOC2	O75106	756 aa		11.7	□□□□□ -0.54
PSMD4-208	ENST00000462970	ATXN8OS	P0DMR3	200 aa		11.7	□□□□□ -0.54
PSMD4-208	ENST00000462970	CYP7A1	P22680	504 aa		11.7	□□□□□ -0.54
PSMD4-208	ENST00000462970	PICALM	Q13492	652 aa		11.7	□□□□□ -0.54
PSMD4-208	ENST00000462970	ANKRD45	Q5TZF3	282 aa		11.7	□□□□□ -0.54
PSMD4-208	ENST00000462970	TSHZ3	Q63HK5	1081 aa		11.7	□□□□□ -0.54
PSMD4-208	ENST00000462970	RGMB	Q6NW40	437 aa		11.7	□□□□□ -0.54
PSMD4-208	ENST00000462970	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.7	□□□□□ -0.54
PSMD4-208	ENST00000462970	CDAN1	Q8IWY9	1227 aa		11.7	□□□□□ -0.54
PSMD4-208	ENST00000462970	RWDD1	Q9H446	243 aa	Predicted RBP	11.7	□□□□□ -0.54
PSMD4-208	ENST00000462970	ANTXR1	Q9H6X2	564 aa		11.7	□□□□□ -0.54
PSMD4-208	ENST00000462970	DOCK2	Q92608	1830 aa		11.7	□□□□□ -0.54
PSMD4-208	ENST00000462970	GAK	O14976	1311 aa		11.69	□□□□□ -0.54
PSMD4-208	ENST00000462970	MYH7	P12883	1935 aa		11.69	□□□□□ -0.54
PSMD4-208	ENST00000462970	PPP1R12B	O60237	982 aa	Predicted RBP	11.69	□□□□□ -0.54
PSMD4-208	ENST00000462970	RGS3	P49796	1198 aa		11.69	□□□□□ -0.54
PSMD4-208	ENST00000462970	FKBP1B	P68106	108 aa		11.69	□□□□□ -0.54
PSMD4-208	ENST00000462970	MAP3K12	Q12852	859 aa		11.69	□□□□□ -0.54
PSMD4-208	ENST00000462970	NFIA	Q12857	509 aa		11.69	□□□□□ -0.54
PSMD4-208	ENST00000462970	AAMP	Q13685	434 aa		11.69	□□□□□ -0.54
PSMD4-208	ENST00000462970	B4GALNT3	Q6L9W6	998 aa		11.69	□□□□□ -0.54
PSMD4-208	ENST00000462970	MAGEB6	Q8N7X4	407 aa		11.69	□□□□□ -0.54
PSMD4-208	ENST00000462970	ZNF384	Q8TF68	577 aa		11.69	□□□□□ -0.54
PSMD4-208	ENST00000462970	EDC3	Q96F86	508 aa	Known RBP	11.69	□□□□□ -0.54
PSMD4-208	ENST00000462970	SSC5D	A1L4H1	1573 aa		11.68	□□□□□ -0.54
PSMD4-208	ENST00000462970	BAG3	O95817	575 aa		11.68	□□□□□ -0.54
PSMD4-208	ENST00000462970	ATP5J	P18859	108 aa		11.68	□□□□□ -0.54
PSMD4-208	ENST00000462970	MKRN3	Q13064	507 aa	Known RBP	11.68	□□□□□ -0.54
PSMD4-208	ENST00000462970	HDAC1	Q13547	482 aa	Predicted RBP	11.68	□□□□□ -0.54
PSMD4-208	ENST00000462970	TTF1	Q15361	905 aa	Predicted RBP	11.68	□□□□□ -0.54
PSMD4-208	ENST00000462970	TEX11	Q8IYF3	940 aa		11.68	□□□□□ -0.54
PSMD4-208	ENST00000462970	MIGA1	Q8NAN2	632 aa		11.68	□□□□□ -0.54
PSMD4-208	ENST00000462970	ECHDC1	Q9NTX5	307 aa		11.68	□□□□□ -0.54
PSMD4-208	ENST00000462970	PAG1	Q9NWQ8	432 aa		11.68	□□□□□ -0.54
PSMD4-208	ENST00000462970	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
PSMD4-208	ENST00000462970	CDK5RAP2	Q96SN8	1893 aa		11.68	□□□□□ -0.54
PSMD4-208	ENST00000462970	OTOF	Q9HC10	1997 aa		11.67	□□□□□ -0.54
PSMD4-208	ENST00000462970	GPR75-ASB3	A0A0A6YYF3	556 aa		11.67	□□□□□ -0.54
PSMD4-208	ENST00000462970	IREB2	P48200	963 aa	Known RBP	11.67	□□□□□ -0.54
PSMD4-208	ENST00000462970	FKBP1C	Q5VVH2	108 aa		11.67	□□□□□ -0.54
PSMD4-208	ENST00000462970	ADGRA1	Q86SQ6	560 aa		11.67	□□□□□ -0.54
PSMD4-208	ENST00000462970	FAM83A	Q86UY5	434 aa		11.67	□□□□□ -0.54
PSMD4-208	ENST00000462970	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.67	□□□□□ -0.54
PSMD4-208	ENST00000462970	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.67	□□□□□ -0.54
PSMD4-208	ENST00000462970	FAM151A	Q8WW52	585 aa		11.67	□□□□□ -0.54
PSMD4-208	ENST00000462970	CCDC102A	Q96A19	550 aa		11.67	□□□□□ -0.54
PSMD4-208	ENST00000462970	AIDA	Q96BJ3	306 aa		11.67	□□□□□ -0.54
PSMD4-208	ENST00000462970	GCC1	Q96CN9	775 aa		11.67	□□□□□ -0.54
PSMD4-208	ENST00000462970	FAM163A	Q96GL9	167 aa	Predicted RBP	11.67	□□□□□ -0.54
PSMD4-208	ENST00000462970	HHIPL1	Q96JK4	782 aa		11.67	□□□□□ -0.54
PSMD4-208	ENST00000462970	TEPSIN	Q96N21	525 aa		11.67	□□□□□ -0.54
PSMD4-208	ENST00000462970	FAM198A	Q9UFP1	575 aa		11.67	□□□□□ -0.54
PSMD4-208	ENST00000462970	MAP4K4	O95819	1239 aa	Predicted RBP	11.66	□□□□□ -0.54
PSMD4-208	ENST00000462970	IGHD	P01880	384 aa		11.66	□□□□□ -0.54
PSMD4-208	ENST00000462970	DYNLL1	P63167	89 aa	Known RBP	11.66	□□□□□ -0.54
PSMD4-208	ENST00000462970	SLC9C2	Q5TAH2	1124 aa		11.66	□□□□□ -0.54
PSMD4-208	ENST00000462970	MIGA2	Q7L4E1	593 aa		11.66	□□□□□ -0.54
PSMD4-208	ENST00000462970	ZFPM1	Q8IX07	1006 aa		11.66	□□□□□ -0.54
PSMD4-208	ENST00000462970	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
PSMD4-208	ENST00000462970	HOOK2	Q96ED9	719 aa		11.66	□□□□□ -0.54
PSMD4-208	ENST00000462970	SLC10A4	Q96EP9	437 aa		11.66	□□□□□ -0.54
PSMD4-208	ENST00000462970	CLMN	Q96JQ2	1002 aa		11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms