RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 SCHIP1Q9P0W5 487 aaPredicted RBP7.65□□□□□ -1.18
SGCE-209ENST00000462731 DACH1Q9UI36 760 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 PPT2Q9UMR5 302 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 PHLDB1Q86UU1 1377 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 MAGEB6P1A0A0J9YX57 407 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 PRPF3O43395 683 aaKnown RBP7.64□□□□□ -1.19
SGCE-209ENST00000462731 GDF9O60383 454 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 GJB6O95452 261 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 INHAP05111 366 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 PHKG2P15735 406 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 HALP42357 657 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 CCDC85BQ15834 202 aaPredicted RBP7.64□□□□□ -1.19
SGCE-209ENST00000462731 SLC4A8Q2Y0W8 1093 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 KANK3Q6NY19 840 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 SAMD7Q7Z3H4 446 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 ZNF354CQ86Y25 554 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 ANKRD24Q8TF21 1146 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 SKA1Q96BD8 255 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 MTMR8Q96EF0 704 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 GPR101Q96P66 508 aaPredicted RBP7.64□□□□□ -1.19
SGCE-209ENST00000462731 ELAC2Q9BQ52 826 aaKnown RBP7.64□□□□□ -1.19
SGCE-209ENST00000462731 CSRNP2Q9H175 543 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 LGR6Q9HBX8 967 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 FAM13BQ9NYF5 915 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 GMPR2Q9P2T1 348 aaKnown RBP7.64□□□□□ -1.19
SGCE-209ENST00000462731 PGAP2Q9UHJ9 254 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 CHMP3Q9Y3E7 222 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 SPEF1Q9Y4P9 236 aa7.64□□□□□ -1.19
SGCE-209ENST00000462731 VSTM5A8MXK1 200 aa7.63□□□□□ -1.19
SGCE-209ENST00000462731 F6X3S4 739 aa7.63□□□□□ -1.19
SGCE-209ENST00000462731 TNFRSF21O75509 655 aa7.63□□□□□ -1.19
SGCE-209ENST00000462731 ABLIM3O94929 683 aa7.63□□□□□ -1.19
SGCE-209ENST00000462731 TYRP1P17643 537 aa7.63□□□□□ -1.19
SGCE-209ENST00000462731 MAP3K10Q02779 954 aa7.63□□□□□ -1.19
SGCE-209ENST00000462731 PUM3Q15397 648 aaKnown RBP7.63□□□□□ -1.19
SGCE-209ENST00000462731 LARP1BQ659C4 914 aaKnown RBP7.63□□□□□ -1.19
SGCE-209ENST00000462731 MMS22LQ6ZRQ5 1243 aa7.63□□□□□ -1.19
SGCE-209ENST00000462731 TOGARAM2Q6ZUX3 1019 aa7.63□□□□□ -1.19
SGCE-209ENST00000462731 SNX29Q8TEQ0 813 aa7.63□□□□□ -1.19
SGCE-209ENST00000462731 MPP4Q96JB8 637 aa7.63□□□□□ -1.19
SGCE-209ENST00000462731 SCLT1Q96NL6 688 aa7.63□□□□□ -1.19
SGCE-209ENST00000462731 CRBNQ96SW2 442 aa7.63□□□□□ -1.19
SGCE-209ENST00000462731 SLC5A4Q9NY91 659 aa7.63□□□□□ -1.19
SGCE-209ENST00000462731 DNAJC25-GNG10A0A024R161 153 aa7.62□□□□□ -1.19
SGCE-209ENST00000462731 TNFRSF10AO00220 468 aa7.62□□□□□ -1.19
SGCE-209ENST00000462731 DXOO77932 396 aaKnown RBP7.62□□□□□ -1.19
SGCE-209ENST00000462731 EPB42P16452 691 aa7.62□□□□□ -1.19
SGCE-209ENST00000462731 ITKQ08881 620 aa7.62□□□□□ -1.19
SGCE-209ENST00000462731 PPP2R5EQ16537 467 aa7.62□□□□□ -1.19
SGCE-209ENST00000462731 RNF219Q5W0B1 726 aaPredicted RBP7.62□□□□□ -1.19
SGCE-209ENST00000462731 PHC3Q8NDX5 983 aa7.62□□□□□ -1.19
SGCE-209ENST00000462731 PI4K2BQ8TCG2 481 aa7.62□□□□□ -1.19
SGCE-209ENST00000462731 GPR152Q8TDT2 470 aa7.62□□□□□ -1.19
SGCE-209ENST00000462731 THAP11Q96EK4 314 aa7.62□□□□□ -1.19
SGCE-209ENST00000462731 IFT43Q96FT9 208 aa7.62□□□□□ -1.19
SGCE-209ENST00000462731 TRIM56Q9BRZ2 755 aaKnown RBP7.62□□□□□ -1.19
SGCE-209ENST00000462731 RHOBTB2Q9BYZ6 727 aa7.62□□□□□ -1.19
SGCE-209ENST00000462731 CTDP1Q9Y5B0 961 aaPredicted RBP7.62□□□□□ -1.19
SGCE-209ENST00000462731 CT47B1P0C2W7 299 aaPredicted RBP7.61□□□□□ -1.19
SGCE-209ENST00000462731 CRKP46108 304 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 SCTRP47872 440 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 HIRAP54198 1017 aaPredicted RBP7.61□□□□□ -1.19
SGCE-209ENST00000462731 TERF1P54274 439 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 WNT7BP56706 349 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 ZNF280AP59817 542 aaPredicted RBP7.61□□□□□ -1.19
SGCE-209ENST00000462731 DGKZQ13574 1117 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 RTN1Q16799 776 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 LONRF1Q17RB8 773 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 MSS51Q4VC12 460 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 SNAP47Q5SQN1 464 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 ZNF697Q5TEC3 545 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 BPHLQ86WA6 291 aaPredicted RBP7.61□□□□□ -1.19
SGCE-209ENST00000462731 SUGP1Q8IWZ8 645 aaKnown RBP7.61□□□□□ -1.19
SGCE-209ENST00000462731 IFNL2Q8IZJ0 200 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 TTC30BQ8N4P2 665 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 JPH3Q8WXH2 748 aaPredicted RBP7.61□□□□□ -1.19
SGCE-209ENST00000462731 KIF2CQ99661 725 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 YIPF4Q9BSR8 244 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 RUSC1Q9BVN2 902 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 PRR14Q9BWN1 585 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 ESF1Q9H501 851 aaKnown RBP7.61□□□□□ -1.19
SGCE-209ENST00000462731 SUV39H2Q9H5I1 410 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 NPHS2Q9NP85 383 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 PLCB1Q9NQ66 1216 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 C9orf78Q9NZ63 289 aaPredicted RBP7.61□□□□□ -1.19
SGCE-209ENST00000462731 SERTAD1Q9UHV2 236 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 EVLQ9UI08 416 aaPredicted RBP7.61□□□□□ -1.19
SGCE-209ENST00000462731 PPM1HQ9ULR3 514 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 MAP4K5Q9Y4K4 846 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 KAT6BQ8WYB5 2073 aa7.61□□□□□ -1.19
SGCE-209ENST00000462731 ROBO2Q9HCK4 1378 aa7.6□□□□□ -1.19
SGCE-209ENST00000462731 A6NHS1 94 aa7.6□□□□□ -1.19
SGCE-209ENST00000462731 RNF223E7ERA6 249 aa7.6□□□□□ -1.19
SGCE-209ENST00000462731 PIP5K1CO60331 668 aa7.6□□□□□ -1.19
SGCE-209ENST00000462731 ZSCAN20P17040 1043 aaPredicted RBP7.6□□□□□ -1.19
SGCE-209ENST00000462731 FAM193AP78312 1265 aa7.6□□□□□ -1.19
SGCE-209ENST00000462731 FAM160A1Q05DH4 1040 aa7.6□□□□□ -1.19
SGCE-209ENST00000462731 MTFR1Q15390 333 aa7.6□□□□□ -1.19
SGCE-209ENST00000462731 CDC37Q16543 378 aaPredicted RBP7.6□□□□□ -1.19
SGCE-209ENST00000462731 ALDH1L2Q3SY69 923 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms