RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 TMEM39BQ9GZU3 492 aa19.37■□□□□ 0.69
ERCC3-206ENST00000462306 TMOD2Q9NZR1 351 aa19.37■□□□□ 0.69
ERCC3-206ENST00000462306 NDUFB9Q9Y6M9 179 aa19.37■□□□□ 0.69
ERCC3-206ENST00000462306 GPR75-ASB3A0A0A6YYF3 556 aa19.36■□□□□ 0.69
ERCC3-206ENST00000462306 UBE2Q2LH0YL09 131 aa19.36■□□□□ 0.69
ERCC3-206ENST00000462306 ECE1P42892 770 aa19.36■□□□□ 0.69
ERCC3-206ENST00000462306 SUPT20HL1Q3ZLR7 823 aa19.36■□□□□ 0.69
ERCC3-206ENST00000462306 RGMBQ6NW40 437 aa19.36■□□□□ 0.69
ERCC3-206ENST00000462306 FAM83AQ86UY5 434 aa19.36■□□□□ 0.69
ERCC3-206ENST00000462306 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.36■□□□□ 0.69
ERCC3-206ENST00000462306 USP40Q9NVE5 1235 aa19.36■□□□□ 0.69
ERCC3-206ENST00000462306 IGSF3O75054 1194 aa19.35■□□□□ 0.69
ERCC3-206ENST00000462306 LDHCP07864 332 aa19.35■□□□□ 0.69
ERCC3-206ENST00000462306 BTDP43251 543 aa19.35■□□□□ 0.69
ERCC3-206ENST00000462306 GSTO1P78417 241 aa19.35■□□□□ 0.69
ERCC3-206ENST00000462306 NFIAQ12857 509 aa19.35■□□□□ 0.69
ERCC3-206ENST00000462306 HDAC1Q13547 482 aaPredicted RBP19.35■□□□□ 0.69
ERCC3-206ENST00000462306 PRKG1Q13976 671 aa19.35■□□□□ 0.69
ERCC3-206ENST00000462306 ANTXR1Q9H6X2 564 aa19.35■□□□□ 0.69
ERCC3-206ENST00000462306 FZD1Q9UP38 647 aa19.35■□□□□ 0.69
ERCC3-206ENST00000462306 THSD7BQ9C0I4 1608 aa19.34■□□□□ 0.69
ERCC3-206ENST00000462306 FAM155AB1AL88 458 aaPredicted RBP19.34■□□□□ 0.69
ERCC3-206ENST00000462306 GRM1Q13255 1194 aa19.34■□□□□ 0.69
ERCC3-206ENST00000462306 TTLL12Q14166 644 aaPredicted RBP19.34■□□□□ 0.69
ERCC3-206ENST00000462306 MAP3K11Q16584 847 aa19.34■□□□□ 0.69
ERCC3-206ENST00000462306 LDLRAD1Q5T700 205 aa19.34■□□□□ 0.69
ERCC3-206ENST00000462306 FAM198AQ9UFP1 575 aa19.34■□□□□ 0.69
ERCC3-206ENST00000462306 RFX7Q2KHR2 1363 aa19.33■□□□□ 0.69
ERCC3-206ENST00000462306 MYO5AQ9Y4I1 1855 aaKnown RBP19.33■□□□□ 0.69
ERCC3-206ENST00000462306 AOC2O75106 756 aa19.33■□□□□ 0.68
ERCC3-206ENST00000462306 ATP5JP18859 108 aa19.33■□□□□ 0.68
ERCC3-206ENST00000462306 ZNF157P51786 506 aaPredicted RBP19.33■□□□□ 0.68
ERCC3-206ENST00000462306 RHBDL3P58872 404 aa19.33■□□□□ 0.68
ERCC3-206ENST00000462306 ARMC9Q7Z3E5 817 aa19.33■□□□□ 0.68
ERCC3-206ENST00000462306 FAM151AQ8WW52 585 aa19.33■□□□□ 0.68
ERCC3-206ENST00000462306 IDI2Q9BXS1 227 aa19.33■□□□□ 0.68
ERCC3-206ENST00000462306 ANGEL1Q9UNK9 670 aaKnown RBP19.33■□□□□ 0.68
ERCC3-206ENST00000462306 RPAP1Q9BWH6 1393 aaPredicted RBP19.32■□□□□ 0.68
ERCC3-206ENST00000462306 MAST2Q6P0Q8 1798 aa19.32■□□□□ 0.68
ERCC3-206ENST00000462306 PPP1R12BO60237 982 aaPredicted RBP19.32■□□□□ 0.68
ERCC3-206ENST00000462306 USP2O75604 605 aaPredicted RBP19.32■□□□□ 0.68
ERCC3-206ENST00000462306 NAA16Q6N069 864 aaPredicted RBP19.32■□□□□ 0.68
ERCC3-206ENST00000462306 CCDC102AQ96A19 550 aa19.32■□□□□ 0.68
ERCC3-206ENST00000462306 WDHD1O75717 1129 aaPredicted RBP19.31■□□□□ 0.68
ERCC3-206ENST00000462306 IDH1O75874 414 aaKnown RBP19.31■□□□□ 0.68
ERCC3-206ENST00000462306 SLC10A3P09131 477 aa19.31■□□□□ 0.68
ERCC3-206ENST00000462306 MAP2K2P36507 400 aa19.31■□□□□ 0.68
ERCC3-206ENST00000462306 TCP10Q12799 353 aa19.31■□□□□ 0.68
ERCC3-206ENST00000462306 ADGRA1Q86SQ6 560 aa19.31■□□□□ 0.68
ERCC3-206ENST00000462306 ZFPM1Q8IX07 1006 aa19.31■□□□□ 0.68
ERCC3-206ENST00000462306 ZIC5Q96T25 663 aa19.31■□□□□ 0.68
ERCC3-206ENST00000462306 PCNTO95613 3336 aa19.3■□□□□ 0.68
ERCC3-206ENST00000462306 DOCK2Q92608 1830 aa19.3■□□□□ 0.68
ERCC3-206ENST00000462306 ENTPD3O75355 529 aa19.3■□□□□ 0.68
ERCC3-206ENST00000462306 RGS3P49796 1198 aa19.3■□□□□ 0.68
ERCC3-206ENST00000462306 NOGQ13253 232 aa19.3■□□□□ 0.68
ERCC3-206ENST00000462306 TTF1Q15361 905 aaPredicted RBP19.3■□□□□ 0.68
ERCC3-206ENST00000462306 RASAL3Q86YV0 1011 aa19.3■□□□□ 0.68
ERCC3-206ENST00000462306 DNAJC2Q99543 621 aaKnown RBP19.3■□□□□ 0.68
ERCC3-206ENST00000462306 BOLA2Q9H3K6 86 aa19.3■□□□□ 0.68
ERCC3-206ENST00000462306 DDX4Q9NQI0 724 aaKnown RBP19.3■□□□□ 0.68
ERCC3-206ENST00000462306 GOLIM4O00461 696 aa19.29■□□□□ 0.68
ERCC3-206ENST00000462306 MAP4K4O95819 1239 aaPredicted RBP19.29■□□□□ 0.68
ERCC3-206ENST00000462306 PPP4CP60510 307 aa19.29■□□□□ 0.68
ERCC3-206ENST00000462306 IRX6P78412 446 aaPredicted RBP19.29■□□□□ 0.68
ERCC3-206ENST00000462306 MAP3K12Q12852 859 aa19.29■□□□□ 0.68
ERCC3-206ENST00000462306 GCC1Q96CN9 775 aa19.29■□□□□ 0.68
ERCC3-206ENST00000462306 EDC3Q96F86 508 aaKnown RBP19.29■□□□□ 0.68
ERCC3-206ENST00000462306 HAUS7Q99871 368 aa19.29■□□□□ 0.68
ERCC3-206ENST00000462306 ECHDC1Q9NTX5 307 aa19.29■□□□□ 0.68
ERCC3-206ENST00000462306 WBP1LQ9NX94 342 aa19.29■□□□□ 0.68
ERCC3-206ENST00000462306 UNCXA6NJT0 531 aa19.28■□□□□ 0.68
ERCC3-206ENST00000462306 HSPA1AP0DMV8 641 aaKnown RBP19.28■□□□□ 0.68
ERCC3-206ENST00000462306 HSPA1BP0DMV9 641 aaKnown RBP19.28■□□□□ 0.68
ERCC3-206ENST00000462306 CYP7A1P22680 504 aa19.28■□□□□ 0.68
ERCC3-206ENST00000462306 IREB2P48200 963 aaKnown RBP19.28■□□□□ 0.68
ERCC3-206ENST00000462306 MAGEB6Q8N7X4 407 aa19.28■□□□□ 0.68
ERCC3-206ENST00000462306 AATFQ9NY61 560 aaKnown RBP eCLIP19.28■□□□□ 0.68
ERCC3-206ENST00000462306 NPM3O75607 178 aaKnown RBP19.27■□□□□ 0.68
ERCC3-206ENST00000462306 IGHDP01880 384 aa19.27■□□□□ 0.68
ERCC3-206ENST00000462306 TMED8Q6PL24 325 aaPredicted RBP19.27■□□□□ 0.68
ERCC3-206ENST00000462306 SH3BP5LQ7L8J4 393 aa19.27■□□□□ 0.68
ERCC3-206ENST00000462306 OTUD7AQ8TE49 926 aaPredicted RBP19.27■□□□□ 0.68
ERCC3-206ENST00000462306 SH3RF3Q8TEJ3 882 aaPredicted RBP19.27■□□□□ 0.68
ERCC3-206ENST00000462306 HOOK2Q96ED9 719 aa19.27■□□□□ 0.68
ERCC3-206ENST00000462306 CLMNQ96JQ2 1002 aa19.27■□□□□ 0.68
ERCC3-206ENST00000462306 RWDD1Q9H446 243 aaPredicted RBP19.27■□□□□ 0.68
ERCC3-206ENST00000462306 PAG1Q9NWQ8 432 aa19.27■□□□□ 0.68
ERCC3-206ENST00000462306 BAG3O95817 575 aa19.26■□□□□ 0.67
ERCC3-206ENST00000462306 MAP2K1Q02750 393 aaPredicted RBP19.26■□□□□ 0.67
ERCC3-206ENST00000462306 PICALMQ13492 652 aa19.26■□□□□ 0.67
ERCC3-206ENST00000462306 ANKRD45Q5TZF3 282 aa19.26■□□□□ 0.67
ERCC3-206ENST00000462306 SMC5Q8IY18 1101 aa19.26■□□□□ 0.67
ERCC3-206ENST00000462306 NOL10Q9BSC4 688 aaKnown RBP19.26■□□□□ 0.67
ERCC3-206ENST00000462306 ATRNL1Q5VV63 1379 aa19.25■□□□□ 0.67
ERCC3-206ENST00000462306 DDTLA6NHG4 134 aaPredicted RBP19.25■□□□□ 0.67
ERCC3-206ENST00000462306 PDE6AP16499 860 aa19.25■□□□□ 0.67
ERCC3-206ENST00000462306 PLCG2P16885 1265 aa19.25■□□□□ 0.67
ERCC3-206ENST00000462306 DYNLL1P63167 89 aaKnown RBP19.25■□□□□ 0.67
ERCC3-206ENST00000462306 KIF23Q02241 960 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms