RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 LGR6Q9HBX8 967 aa7.6□□□□□ -1.19
VPS36-202ENST00000462289 ATG3Q9NT62 314 aa7.6□□□□□ -1.19
VPS36-202ENST00000462289 SERTAD1Q9UHV2 236 aa7.6□□□□□ -1.19
VPS36-202ENST00000462289 USP3Q9Y6I4 520 aa7.6□□□□□ -1.19
VPS36-202ENST00000462289 CACNA1FO60840 1977 aa7.59□□□□□ -1.19
VPS36-202ENST00000462289 APBA3O96018 575 aa7.59□□□□□ -1.19
VPS36-202ENST00000462289 ARAFP10398 606 aa7.59□□□□□ -1.19
VPS36-202ENST00000462289 TMPOP42166 694 aaKnown RBP7.59□□□□□ -1.19
VPS36-202ENST00000462289 EZH2Q15910 746 aaKnown RBP7.59□□□□□ -1.19
VPS36-202ENST00000462289 TXNRD1Q16881 649 aa7.59□□□□□ -1.19
VPS36-202ENST00000462289 CCDC27Q2M243 656 aa7.59□□□□□ -1.19
VPS36-202ENST00000462289 C1orf141Q5JVX7 400 aa7.59□□□□□ -1.19
VPS36-202ENST00000462289 MPRIPQ6WCQ1 1025 aa7.59□□□□□ -1.19
VPS36-202ENST00000462289 SMARCC1Q92922 1105 aaPredicted RBP7.59□□□□□ -1.19
VPS36-202ENST00000462289 ACSBG1Q96GR2 724 aa7.59□□□□□ -1.19
VPS36-202ENST00000462289 BABAM1Q9NWV8 329 aa7.59□□□□□ -1.19
VPS36-202ENST00000462289 GGA1Q9UJY5 639 aa7.59□□□□□ -1.19
VPS36-202ENST00000462289 HCN2Q9UL51 889 aa7.59□□□□□ -1.19
VPS36-202ENST00000462289 MKL2Q9ULH7 1088 aa7.59□□□□□ -1.19
VPS36-202ENST00000462289 ZNF521Q96K83 1311 aa7.58□□□□□ -1.2
VPS36-202ENST00000462289 A0A1W2PNR3 127 aa7.58□□□□□ -1.2
VPS36-202ENST00000462289 CNGB1Q14028 1251 aaPredicted RBP7.58□□□□□ -1.2
VPS36-202ENST00000462289 ALYREFQ86V81 257 aaKnown RBP7.58□□□□□ -1.2
VPS36-202ENST00000462289 AIDAQ96BJ3 306 aa7.58□□□□□ -1.2
VPS36-202ENST00000462289 POM121Q96HA1 1249 aa7.58□□□□□ -1.2
VPS36-202ENST00000462289 TMOD3Q9NYL9 352 aa7.58□□□□□ -1.2
VPS36-202ENST00000462289 ASAP1Q9ULH1 1129 aa7.58□□□□□ -1.2
VPS36-202ENST00000462289 NOD1Q9Y239 953 aa7.58□□□□□ -1.2
VPS36-202ENST00000462289 BCORQ6W2J9 1755 aa7.57□□□□□ -1.2
VPS36-202ENST00000462289 LOC102724428A0A0B4J2F2 783 aa7.57□□□□□ -1.2
VPS36-202ENST00000462289 MSTNO14793 375 aa7.57□□□□□ -1.2
VPS36-202ENST00000462289 BACH1O14867 736 aa7.57□□□□□ -1.2
VPS36-202ENST00000462289 ATXN7O15265 892 aaPredicted RBP7.57□□□□□ -1.2
VPS36-202ENST00000462289 PROCP04070 461 aa7.57□□□□□ -1.2
VPS36-202ENST00000462289 ZNF853P0CG23 659 aa7.57□□□□□ -1.2
VPS36-202ENST00000462289 EPXP11678 715 aa7.57□□□□□ -1.2
VPS36-202ENST00000462289 SKIP12755 728 aa7.57□□□□□ -1.2
VPS36-202ENST00000462289 PRKCSHP14314 528 aaPredicted RBP7.57□□□□□ -1.2
VPS36-202ENST00000462289 EPHA4P54764 986 aa7.57□□□□□ -1.2
VPS36-202ENST00000462289 SIK1P57059 783 aa7.57□□□□□ -1.2
VPS36-202ENST00000462289 TNP2Q05952 138 aa7.57□□□□□ -1.2
VPS36-202ENST00000462289 SF3B2Q13435 895 aaKnown RBP7.57□□□□□ -1.2
VPS36-202ENST00000462289 NCOA4Q13772 614 aa7.57□□□□□ -1.2
VPS36-202ENST00000462289 LINC00114Q6XXX2 140 aa7.57□□□□□ -1.2
VPS36-202ENST00000462289 NGEFQ8N5V2 710 aa7.57□□□□□ -1.2
VPS36-202ENST00000462289 SPOCK3Q9BQ16 436 aa7.57□□□□□ -1.2
VPS36-202ENST00000462289 AVENQ9NQS1 362 aaPredicted RBP7.57□□□□□ -1.2
VPS36-202ENST00000462289 SCHIP1Q9P0W5 487 aaPredicted RBP7.57□□□□□ -1.2
VPS36-202ENST00000462289 CNTNAP4Q9C0A0 1308 aa7.56□□□□□ -1.2
VPS36-202ENST00000462289 FAM157BP0CG42 384 aa7.56□□□□□ -1.2
VPS36-202ENST00000462289 MAPTP10636 758 aaKnown RBP7.56□□□□□ -1.2
VPS36-202ENST00000462289 HMGB2P26583 209 aaKnown RBP7.56□□□□□ -1.2
VPS36-202ENST00000462289 GTF2IP78347 998 aa7.56□□□□□ -1.2
VPS36-202ENST00000462289 ITPK1Q13572 414 aa7.56□□□□□ -1.2
VPS36-202ENST00000462289 WDR43Q15061 677 aaKnown RBP eCLIP7.56□□□□□ -1.2
VPS36-202ENST00000462289 SAMD5Q5TGI4 173 aa7.56□□□□□ -1.2
VPS36-202ENST00000462289 DIEXFQ68CQ4 756 aaKnown RBP7.56□□□□□ -1.2
VPS36-202ENST00000462289 ZNF790Q6PG37 636 aa7.56□□□□□ -1.2
VPS36-202ENST00000462289 WWC1Q8IX03 1113 aa7.56□□□□□ -1.2
VPS36-202ENST00000462289 ZIC5Q96T25 663 aa7.56□□□□□ -1.2
VPS36-202ENST00000462289 MRS2Q9HD23 443 aa7.56□□□□□ -1.2
VPS36-202ENST00000462289 SCN7AQ01118 1682 aa7.56□□□□□ -1.2
VPS36-202ENST00000462289 KIF13BQ9NQT8 1826 aa7.55□□□□□ -1.2
VPS36-202ENST00000462289 CHL1O00533 1208 aa7.55□□□□□ -1.2
VPS36-202ENST00000462289 COL8A1P27658 744 aa7.55□□□□□ -1.2
VPS36-202ENST00000462289 DGKGP49619 791 aa7.55□□□□□ -1.2
VPS36-202ENST00000462289 CABP4P57796 275 aa7.55□□□□□ -1.2
VPS36-202ENST00000462289 MCM10Q7L590 875 aa7.55□□□□□ -1.2
VPS36-202ENST00000462289 ZNF358Q9NW07 568 aa7.55□□□□□ -1.2
VPS36-202ENST00000462289 NRXN2Q9P2S2 1712 aa7.55□□□□□ -1.2
VPS36-202ENST00000462289 IL16Q14005 1332 aa7.54□□□□□ -1.2
VPS36-202ENST00000462289 MAPK8IP3Q9UPT6 1336 aa7.54□□□□□ -1.2
VPS36-202ENST00000462289 DCDC2BA2VCK2 349 aa7.54□□□□□ -1.2
VPS36-202ENST00000462289 KRBA1A5PL33 1030 aa7.54□□□□□ -1.2
VPS36-202ENST00000462289 USP17L5A8MUK1 530 aa7.54□□□□□ -1.2
VPS36-202ENST00000462289 APAF1O14727 1248 aa7.54□□□□□ -1.2
VPS36-202ENST00000462289 RIPK4P57078 832 aa7.54□□□□□ -1.2
VPS36-202ENST00000462289 LMOD3Q0VAK6 560 aa7.54□□□□□ -1.2
VPS36-202ENST00000462289 DCTN1Q14203 1278 aa7.54□□□□□ -1.2
VPS36-202ENST00000462289 TAF7Q15545 349 aaPredicted RBP7.54□□□□□ -1.2
VPS36-202ENST00000462289 TEAD4Q15561 434 aa7.54□□□□□ -1.2
VPS36-202ENST00000462289 SLC15A2Q16348 729 aa7.54□□□□□ -1.2
VPS36-202ENST00000462289 ZNF827Q17R98 1081 aa7.54□□□□□ -1.2
VPS36-202ENST00000462289 ARSJQ5FYB0 599 aaPredicted RBP7.54□□□□□ -1.2
VPS36-202ENST00000462289 AMIGO3Q86WK7 504 aa7.54□□□□□ -1.2
VPS36-202ENST00000462289 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.54□□□□□ -1.2
VPS36-202ENST00000462289 ADAMTS19Q8TE59 1207 aa7.54□□□□□ -1.2
VPS36-202ENST00000462289 ZDHHC1Q8WTX9 485 aa7.54□□□□□ -1.2
VPS36-202ENST00000462289 ZNF496Q96IT1 587 aaPredicted RBP7.54□□□□□ -1.2
VPS36-202ENST00000462289 BTBD6Q96KE9 485 aa7.54□□□□□ -1.2
VPS36-202ENST00000462289 KLF15Q9UIH9 416 aa7.54□□□□□ -1.2
VPS36-202ENST00000462289 EML1O00423 815 aa7.53□□□□□ -1.2
VPS36-202ENST00000462289 EFSO43281 561 aa7.53□□□□□ -1.2
VPS36-202ENST00000462289 CYP19A1P11511 503 aaPredicted RBP7.53□□□□□ -1.2
VPS36-202ENST00000462289 ADH6P28332 368 aa7.53□□□□□ -1.2
VPS36-202ENST00000462289 TEFQ10587 303 aa7.53□□□□□ -1.2
VPS36-202ENST00000462289 FLIIQ13045 1269 aa7.53□□□□□ -1.2
VPS36-202ENST00000462289 LAMC2Q13753 1193 aa7.53□□□□□ -1.2
VPS36-202ENST00000462289 INTS5Q6P9B9 1019 aaKnown RBP7.53□□□□□ -1.2
VPS36-202ENST00000462289 LRP10Q7Z4F1 713 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms