RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 MARF1Q9Y4F3 1742 aaKnown RBP7.49□□□□□ -1.21
COPS3-204ENST00000462236 PLEKHG1Q9ULL1 1385 aa7.49□□□□□ -1.21
COPS3-204ENST00000462236 GHRHP01286 108 aa7.49□□□□□ -1.21
COPS3-204ENST00000462236 EPXP11678 715 aa7.49□□□□□ -1.21
COPS3-204ENST00000462236 RXRBP28702 533 aa7.49□□□□□ -1.21
COPS3-204ENST00000462236 FCHSD1Q86WN1 690 aa7.49□□□□□ -1.21
COPS3-204ENST00000462236 ZNF775Q96BV0 537 aaPredicted RBP7.49□□□□□ -1.21
COPS3-204ENST00000462236 SUV39H2Q9H5I1 410 aa7.49□□□□□ -1.21
COPS3-204ENST00000462236 KANSL3Q9P2N6 904 aa7.49□□□□□ -1.21
COPS3-204ENST00000462236 AK5Q9Y6K8 562 aa7.49□□□□□ -1.21
COPS3-204ENST00000462236 SETD5Q9C0A6 1442 aa7.49□□□□□ -1.21
COPS3-204ENST00000462236 GMPRP36959 345 aa7.48□□□□□ -1.21
COPS3-204ENST00000462236 PSMD2Q13200 908 aa7.48□□□□□ -1.21
COPS3-204ENST00000462236 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.48□□□□□ -1.21
COPS3-204ENST00000462236 COL13A1Q5TAT6 717 aaPredicted RBP7.48□□□□□ -1.21
COPS3-204ENST00000462236 MYOM3Q5VTT5 1437 aa7.48□□□□□ -1.21
COPS3-204ENST00000462236 PRPF40BQ6NWY9 871 aaKnown RBP7.48□□□□□ -1.21
COPS3-204ENST00000462236 ADAMTS13Q76LX8 1427 aa7.48□□□□□ -1.21
COPS3-204ENST00000462236 ACDQ96AP0 544 aa7.48□□□□□ -1.21
COPS3-204ENST00000462236 ZFYVE1Q9HBF4 777 aa7.48□□□□□ -1.21
COPS3-204ENST00000462236 NPHS2Q9NP85 383 aa7.48□□□□□ -1.21
COPS3-204ENST00000462236 NRXN3Q9Y4C0 1643 aa7.48□□□□□ -1.21
COPS3-204ENST00000462236 KIF15Q9NS87 1388 aa7.47□□□□□ -1.21
COPS3-204ENST00000462236 SETBP1Q9Y6X0 1596 aa7.47□□□□□ -1.21
COPS3-204ENST00000462236 DCCP43146 1447 aa7.47□□□□□ -1.21
COPS3-204ENST00000462236 A0A1W2PP55 124 aa7.47□□□□□ -1.21
COPS3-204ENST00000462236 E9PSI1 815 aa7.47□□□□□ -1.21
COPS3-204ENST00000462236 OIP5O43482 229 aa7.47□□□□□ -1.21
COPS3-204ENST00000462236 POLR3DP05423 398 aaPredicted RBP7.47□□□□□ -1.21
COPS3-204ENST00000462236 BCRP11274 1271 aa7.47□□□□□ -1.21
COPS3-204ENST00000462236 XRCC5P13010 732 aaKnown RBP7.47□□□□□ -1.21
COPS3-204ENST00000462236 PEAR1Q5VY43 1037 aaPredicted RBP7.47□□□□□ -1.21
COPS3-204ENST00000462236 FAM35AQ86V20 835 aa7.47□□□□□ -1.21
COPS3-204ENST00000462236 TMEM102Q8N9M5 508 aaPredicted RBP7.47□□□□□ -1.21
COPS3-204ENST00000462236 EPS8L3Q8TE67 593 aaKnown RBP7.47□□□□□ -1.21
COPS3-204ENST00000462236 NSUN5Q96P11 429 aaKnown RBP7.47□□□□□ -1.21
COPS3-204ENST00000462236 PBX4Q9BYU1 374 aa7.47□□□□□ -1.21
COPS3-204ENST00000462236 IGFLR1Q9H665 355 aa7.47□□□□□ -1.21
COPS3-204ENST00000462236 MRS2Q9HD23 443 aa7.47□□□□□ -1.21
COPS3-204ENST00000462236 DZANK1Q9NVP4 752 aa7.47□□□□□ -1.21
COPS3-204ENST00000462236 RPRD2Q5VT52 1461 aaKnown RBP7.47□□□□□ -1.21
COPS3-204ENST00000462236 BRWD3Q6RI45 1802 aa7.47□□□□□ -1.21
COPS3-204ENST00000462236 ASXL1Q8IXJ9 1541 aa7.47□□□□□ -1.21
COPS3-204ENST00000462236 PIK3R4Q99570 1358 aa7.46□□□□□ -1.21
COPS3-204ENST00000462236 ABCC5O15440 1437 aa7.46□□□□□ -1.21
COPS3-204ENST00000462236 LRP5O75197 1615 aa7.46□□□□□ -1.21
COPS3-204ENST00000462236 PTPN23Q9H3S7 1636 aa7.46□□□□□ -1.21
COPS3-204ENST00000462236 SORBS3O60504 671 aa7.46□□□□□ -1.22
COPS3-204ENST00000462236 GADD45BO75293 160 aaPredicted RBP7.46□□□□□ -1.22
COPS3-204ENST00000462236 SMNDC1O75940 238 aaKnown RBP eCLIP7.46□□□□□ -1.22
COPS3-204ENST00000462236 RBM25P49756 843 aaKnown RBP7.46□□□□□ -1.22
COPS3-204ENST00000462236 TAGLNQ01995 201 aaKnown RBP7.46□□□□□ -1.22
COPS3-204ENST00000462236 PTPN12Q05209 780 aaKnown RBP7.46□□□□□ -1.22
COPS3-204ENST00000462236 MRPL58Q14197 206 aaKnown RBP7.46□□□□□ -1.22
COPS3-204ENST00000462236 LCE2AQ5TA79 106 aaPredicted RBP7.46□□□□□ -1.22
COPS3-204ENST00000462236 NPM2Q86SE8 214 aaKnown RBP7.46□□□□□ -1.22
COPS3-204ENST00000462236 SETDB2Q96T68 719 aa7.46□□□□□ -1.22
COPS3-204ENST00000462236 OSMRQ99650 979 aa7.46□□□□□ -1.22
COPS3-204ENST00000462236 BHLHE41Q9C0J9 482 aaPredicted RBP7.46□□□□□ -1.22
COPS3-204ENST00000462236 C12orf49Q9H741 205 aa7.46□□□□□ -1.22
COPS3-204ENST00000462236 FAM8A1Q9UBU6 413 aa7.46□□□□□ -1.22
COPS3-204ENST00000462236 TBX22Q9Y458 520 aa7.46□□□□□ -1.22
COPS3-204ENST00000462236 AFF2P51816 1311 aa7.46□□□□□ -1.22
COPS3-204ENST00000462236 UNC13BO14795 1591 aa7.46□□□□□ -1.22
COPS3-204ENST00000462236 NALCNQ8IZF0 1738 aa7.45□□□□□ -1.22
COPS3-204ENST00000462236 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.45□□□□□ -1.22
COPS3-204ENST00000462236 EIF2AK2P19525 551 aaKnown RBP7.45□□□□□ -1.22
COPS3-204ENST00000462236 EIF4BP23588 611 aaKnown RBP7.45□□□□□ -1.22
COPS3-204ENST00000462236 TBC1D8BQ0IIM8 1120 aa7.45□□□□□ -1.22
COPS3-204ENST00000462236 LCE2CQ5TA81 110 aa7.45□□□□□ -1.22
COPS3-204ENST00000462236 ELMSAN1Q6PJG2 1045 aa7.45□□□□□ -1.22
COPS3-204ENST00000462236 BRINP3Q76B58 766 aa7.45□□□□□ -1.22
COPS3-204ENST00000462236 CCNJLQ8IV13 435 aa7.45□□□□□ -1.22
COPS3-204ENST00000462236 MICALL1Q8N3F8 863 aa7.45□□□□□ -1.22
COPS3-204ENST00000462236 ANKRD24Q8TF21 1146 aa7.45□□□□□ -1.22
COPS3-204ENST00000462236 EDARADDQ8WWZ3 215 aa7.45□□□□□ -1.22
COPS3-204ENST00000462236 MRRFQ96E11 262 aaKnown RBP7.45□□□□□ -1.22
COPS3-204ENST00000462236 ZKSCAN3Q9BRR0 538 aa7.45□□□□□ -1.22
COPS3-204ENST00000462236 BCO2Q9BYV7 579 aa7.45□□□□□ -1.22
COPS3-204ENST00000462236 EHD4Q9H223 541 aa7.45□□□□□ -1.22
COPS3-204ENST00000462236 LIN7BQ9HAP6 207 aa7.45□□□□□ -1.22
COPS3-204ENST00000462236 PRDM6Q9NQX0 595 aa7.45□□□□□ -1.22
COPS3-204ENST00000462236 COL22A1Q8NFW1 1626 aaPredicted RBP7.45□□□□□ -1.22
COPS3-204ENST00000462236 E9PCH4 1651 aa7.44□□□□□ -1.22
COPS3-204ENST00000462236 PTPRUQ92729 1446 aa7.44□□□□□ -1.22
COPS3-204ENST00000462236 RIMS2Q9UQ26 1411 aa7.44□□□□□ -1.22
COPS3-204ENST00000462236 TRPM2O94759 1503 aa7.44□□□□□ -1.22
COPS3-204ENST00000462236 UNCXA6NJT0 531 aa7.44□□□□□ -1.22
COPS3-204ENST00000462236 J3QW42 95 aa7.44□□□□□ -1.22
COPS3-204ENST00000462236 NFKBIEO00221 500 aa7.44□□□□□ -1.22
COPS3-204ENST00000462236 PDE2AO00408 941 aaPredicted RBP7.44□□□□□ -1.22
COPS3-204ENST00000462236 CPB1P15086 417 aa7.44□□□□□ -1.22
COPS3-204ENST00000462236 IRS1P35568 1242 aa7.44□□□□□ -1.22
COPS3-204ENST00000462236 RBM6P78332 1123 aaKnown RBP7.44□□□□□ -1.22
COPS3-204ENST00000462236 MLLT1Q03111 559 aaPredicted RBP7.44□□□□□ -1.22
COPS3-204ENST00000462236 GRM2Q14416 872 aa7.44□□□□□ -1.22
COPS3-204ENST00000462236 PERM1Q5SV97 790 aa7.44□□□□□ -1.22
COPS3-204ENST00000462236 MEX3CQ5U5Q3 659 aaKnown RBP7.44□□□□□ -1.22
COPS3-204ENST00000462236 GALNT6Q8NCL4 622 aa7.44□□□□□ -1.22
COPS3-204ENST00000462236 NXPE3Q969Y0 559 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms